RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 ZNF3P17036 446 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 CALB2P22676 271 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 BACE1P56817 501 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 ZNF57Q68EA5 555 aaPredicted RBP13.45□□□□□ -0.26
PRDM16-201ENST00000270722 LRRC74BQ6ZQY2 392 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 MCEMP1Q8IX19 187 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 CEP295NLQ96MC4 621 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 ABHD16BQ9H3Z7 469 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 ZNF510Q9Y2H8 683 aa13.45□□□□□ -0.26
PRDM16-201ENST00000270722 C2orf71A6NGG8 1288 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 MDM4O15151 490 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 CDH17Q12864 832 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 NAB1Q13506 487 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 PACS2Q86VP3 889 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 DQX1Q8TE96 717 aaKnown RBP13.44□□□□□ -0.26
PRDM16-201ENST00000270722 TPRKBQ9Y3C4 175 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 ZNF682O95780 498 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 CCNA2P20248 432 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 FXR2P51116 673 aaKnown RBP eCLIP13.44□□□□□ -0.26
PRDM16-201ENST00000270722 SNRPD1P62314 119 aaKnown RBP13.44□□□□□ -0.26
PRDM16-201ENST00000270722 NFE2L1Q14494 772 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 CBWD2Q8IUF1 395 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 CCDC71Q8IV32 467 aaPredicted RBP13.44□□□□□ -0.26
PRDM16-201ENST00000270722 MTFR1LQ9H019 292 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 TIPRLO75663 272 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 PRKACAP17612 351 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 PTPN5P54829 565 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 ARF3P61204 181 aaPredicted RBP13.44□□□□□ -0.26
PRDM16-201ENST00000270722 ARF1P84077 181 aaKnown RBP13.44□□□□□ -0.26
PRDM16-201ENST00000270722 SLC15A2Q16348 729 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 TRPV1Q8NER1 839 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 PABPC3Q9H361 631 aaKnown RBP13.44□□□□□ -0.26
PRDM16-201ENST00000270722 NEDD4P46934 1319 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 TRAV19A0A0A6YYK7 116 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 TBC1D3BA6NDS4 549 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 MYL12BO14950 172 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 RB1P06400 928 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 CENPIQ92674 756 aaPredicted RBP13.44□□□□□ -0.26
PRDM16-201ENST00000270722 ZNF668Q96K58 619 aaPredicted RBP13.44□□□□□ -0.26
PRDM16-201ENST00000270722 FAM84BQ96KN1 310 aaPredicted RBP13.44□□□□□ -0.26
PRDM16-201ENST00000270722 PPP1R36Q96LQ0 422 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 PRRG4Q9BZD6 226 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 ELOVL2Q9NXB9 296 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 KDM6BO15054 1643 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 MYH1P12882 1939 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 MYH4Q9Y623 1939 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 CYP2D6P10635 497 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 FGFR4P22455 802 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 GP5P40197 560 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 TBX4P57082 545 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 RGS1Q08116 209 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 PGS1Q32NB8 556 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 SLC44A5Q8NCS7 719 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 OR56A4Q8NGH8 313 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 NSUN4Q96CB9 384 aaKnown RBP13.44□□□□□ -0.26
PRDM16-201ENST00000270722 SIPA1Q96FS4 1042 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 MLXIPLQ9NP71 852 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 SNX6Q9UNH7 406 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 POU1F1P28069 291 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 OAZ1P54368 228 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 DEF8Q6ZN54 512 aa13.44□□□□□ -0.26
PRDM16-201ENST00000270722 EML1O00423 815 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 FSBPO95073 299 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 ALDH9A1P49189 494 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 BCL2L1Q07817 233 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 BMT2Q1RMZ1 405 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 IZUMO1Q8IYV9 350 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 GPAMQ9HCL2 828 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 AASDHPPTQ9NRN7 309 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 ZNF222Q9UK12 451 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 ANKDD1BA6NHY2 528 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 MAGEB3O15480 346 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 GHRP10912 638 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 HECTD3Q5T447 861 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 ILDR2Q71H61 639 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 ACTRT2Q8TDY3 377 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 TSPAN1O60635 241 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 RECQL5O94762 991 aaPredicted RBP13.43□□□□□ -0.26
PRDM16-201ENST00000270722 ADH1AP07327 375 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 IGFALSP35858 605 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 SRSF11Q05519 484 aaKnown RBP13.43□□□□□ -0.26
PRDM16-201ENST00000270722 SMARCB1Q12824 385 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 GRIK3Q13003 919 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 TCEAL6Q6IPX3 200 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 PDPRQ8NCN5 879 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 MTMR9Q96QG7 549 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 RBM7Q9Y580 266 aaKnown RBP13.43□□□□□ -0.26
PRDM16-201ENST00000270722 NMT1P30419 496 aaKnown RBP13.43□□□□□ -0.26
PRDM16-201ENST00000270722 RPL9P32969 192 aaKnown RBP13.43□□□□□ -0.26
PRDM16-201ENST00000270722 CIDECQ96AQ7 238 aaPredicted RBP13.43□□□□□ -0.26
PRDM16-201ENST00000270722 CXorf40BQ96DE9 158 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 TMX2Q9Y320 296 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 PDLIM1O00151 329 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 SOX11P35716 441 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 SCNN1BP51168 640 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 SULT2A1Q06520 285 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 RFTN2Q52LD8 501 aaPredicted RBP13.43□□□□□ -0.26
PRDM16-201ENST00000270722 OR7A2PQ8NGA2 310 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 C12orf66Q96MD2 445 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 ERP44Q9BS26 406 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms