RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 FUKQ8N0W3 1084 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 MIER2Q8N344 545 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 EIF1ADQ8N9N8 165 aaKnown RBP13.47□□□□□ -0.25
SMG9-201ENST00000270066 DDHD1Q8NEL9 900 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 FAM45AQ8TCE6 357 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 QRFPRQ96P65 431 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 TTPALQ9BTX7 342 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 RAD21L1Q9H4I0 556 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 POMKQ9H5K3 350 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 UBXN8O00124 270 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 SEC22BO75396 215 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 HPCAL1P37235 193 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 SPRYD7Q5W111 196 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 SPPL2BQ8TCT7 592 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 PRCCQ92733 491 aaPredicted RBP13.47□□□□□ -0.25
SMG9-201ENST00000270066 MORF4L1Q9UBU8 362 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 ADAM28Q9UKQ2 775 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 MYO5BQ9ULV0 1848 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 M0R3G1 203 aa13.46□□□□□ -0.25
SMG9-201ENST00000270066 LIASO43766 372 aa13.46□□□□□ -0.25
SMG9-201ENST00000270066 TRIM60Q495X7 471 aa13.46□□□□□ -0.25
SMG9-201ENST00000270066 ARHGAP22Q7Z5H3 698 aa13.46□□□□□ -0.25
SMG9-201ENST00000270066 KYQ8NBH2 561 aa13.46□□□□□ -0.25
SMG9-201ENST00000270066 ATXN2LQ8WWM7 1075 aaKnown RBP13.46□□□□□ -0.25
SMG9-201ENST00000270066 RNPEPQ9H4A4 650 aa13.46□□□□□ -0.25
SMG9-201ENST00000270066 SNX8Q9Y5X2 465 aa13.46□□□□□ -0.25
SMG9-201ENST00000270066 YDJCA8MPS7 323 aa13.46□□□□□ -0.25
SMG9-201ENST00000270066 GLUD1P00367 558 aa13.46□□□□□ -0.25
SMG9-201ENST00000270066 MARSP56192 900 aaKnown RBP13.46□□□□□ -0.25
SMG9-201ENST00000270066 HLA-DQA1Q5Y7H0 255 aa13.46□□□□□ -0.25
SMG9-201ENST00000270066 GRIN3AQ8TCU5 1115 aa13.46□□□□□ -0.25
SMG9-201ENST00000270066 CATSPER2Q96P56 530 aa13.46□□□□□ -0.25
SMG9-201ENST00000270066 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.46□□□□□ -0.25
SMG9-201ENST00000270066 DUSP11O75319 330 aaKnown RBP13.46□□□□□ -0.25
SMG9-201ENST00000270066 CXCL14O95715 111 aa13.46□□□□□ -0.25
SMG9-201ENST00000270066 ICAM3P32942 547 aa13.46□□□□□ -0.25
SMG9-201ENST00000270066 GLUD2P49448 558 aa13.46□□□□□ -0.25
SMG9-201ENST00000270066 FAAP100Q0VG06 881 aa13.46□□□□□ -0.25
SMG9-201ENST00000270066 FAM46CQ5VWP2 391 aa13.46□□□□□ -0.25
SMG9-201ENST00000270066 ALLCQ8N6M5 410 aa13.46□□□□□ -0.25
SMG9-201ENST00000270066 ATL1Q8WXF7 558 aa13.46□□□□□ -0.25
SMG9-201ENST00000270066 MIEF2Q96C03 454 aa13.46□□□□□ -0.25
SMG9-201ENST00000270066 SYT17Q9BSW7 474 aa13.46□□□□□ -0.25
SMG9-201ENST00000270066 ARL15Q9NXU5 204 aa13.46□□□□□ -0.25
SMG9-201ENST00000270066 FAM50BQ9Y247 325 aa13.46□□□□□ -0.25
SMG9-201ENST00000270066 SLC27A5Q9Y2P5 690 aa13.46□□□□□ -0.25
SMG9-201ENST00000270066 B4GALT4O60513 344 aa13.46□□□□□ -0.26
SMG9-201ENST00000270066 SLURP2P0DP57 97 aa13.46□□□□□ -0.26
SMG9-201ENST00000270066 SERPINB1P30740 379 aa13.46□□□□□ -0.26
SMG9-201ENST00000270066 CCT8P50990 548 aa13.46□□□□□ -0.26
SMG9-201ENST00000270066 INSCQ1MX18 579 aa13.46□□□□□ -0.26
SMG9-201ENST00000270066 TSHZ1Q6ZSZ6 1077 aa13.46□□□□□ -0.26
SMG9-201ENST00000270066 MON1AQ86VX9 555 aa13.46□□□□□ -0.26
SMG9-201ENST00000270066 ZNF786Q8N393 782 aa13.46□□□□□ -0.26
SMG9-201ENST00000270066 UBE2E3Q969T4 207 aa13.46□□□□□ -0.26
SMG9-201ENST00000270066 CNTNAP1P78357 1384 aa13.46□□□□□ -0.26
SMG9-201ENST00000270066 MAP2K7O14733 419 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 FSBPO95073 299 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 ITGAVP06756 1048 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 GJB1P08034 283 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 PTPN4P29074 926 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 GPR15P49685 360 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 LLGL2Q6P1M3 1020 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 NPNTQ6UXI9 565 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 SERPINA13PQ6UXR4 307 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 CDK20Q8IZL9 346 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 OR52K1Q8NGK4 314 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 MAGEB10Q96LZ2 347 aaPredicted RBP13.45□□□□□ -0.26
SMG9-201ENST00000270066 TMEM237Q96Q45 408 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 HGH1Q9BTY7 390 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 NIFKQ9BYG3 293 aaKnown RBP13.45□□□□□ -0.26
SMG9-201ENST00000270066 NXF3Q9H4D5 531 aaKnown RBP13.45□□□□□ -0.26
SMG9-201ENST00000270066 RXFP1Q9HBX9 757 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 BTBD7Q9P203 1132 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 NDUFAF1Q9Y375 327 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 SNX13Q9Y5W8 968 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 PDE2AO00408 941 aaPredicted RBP13.45□□□□□ -0.26
SMG9-201ENST00000270066 TTPAP49638 278 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 CLCN5P51795 746 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.45□□□□□ -0.26
SMG9-201ENST00000270066 ASB8Q9H765 288 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 PARP4Q9UKK3 1724 aaKnown RBP13.45□□□□□ -0.26
SMG9-201ENST00000270066 COL14A1Q05707 1796 aaKnown RBP13.45□□□□□ -0.26
SMG9-201ENST00000270066 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.45□□□□□ -0.26
SMG9-201ENST00000270066 USP12O75317 370 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 NFKB1P19838 968 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.45□□□□□ -0.26
SMG9-201ENST00000270066 STXBP5Q5T5C0 1151 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 CYP20A1Q6UW02 462 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 CACUL1Q86Y37 369 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 CREG2Q8IUH2 290 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 TSEN2Q8NCE0 465 aaKnown RBP13.45□□□□□ -0.26
SMG9-201ENST00000270066 BBS4Q96RK4 519 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 SLC39A8Q9C0K1 460 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.45□□□□□ -0.26
SMG9-201ENST00000270066 CRYL1Q9Y2S2 319 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 CCDC154A6NI56 674 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 ANXA5P08758 320 aa13.45□□□□□ -0.26
SMG9-201ENST00000270066 LTA4HP09960 611 aaKnown RBP13.45□□□□□ -0.26
SMG9-201ENST00000270066 CXCR2P25025 360 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms