RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 PQLC3Q8N755 202 aa14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 PHF21BQ96EK2 531 aa14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 SERAC1Q96JX3 654 aa14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 SPATA16Q9BXB7 569 aa14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 DUSP16Q9BY84 665 aa14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 PAK5Q9P286 719 aa14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 AFF4Q9UHB7 1163 aaKnown RBP14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 PHF24Q9UPV7 400 aa14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 SLC5A3P53794 718 aa14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 ACSBG2Q5FVE4 666 aa14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 LAYNQ6UX15 382 aa14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 STRA8Q7Z7C7 330 aa14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 CDKL3Q8IVW4 592 aaPredicted RBP14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 C17orf50Q8WW18 174 aa14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 SEC14L1Q92503 715 aa14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 CDKL2Q92772 493 aa14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 ABHD8Q96I13 439 aa14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 FCRL2Q96LA5 508 aaPredicted RBP14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 LHX5Q9H2C1 402 aa14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 NDE1Q9NXR1 346 aa14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 SPATA7Q9P0W8 599 aa14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 CHKBQ9Y259 395 aa14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 OR51F1A6NGY5 319 aa14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 C9JVG2 144 aa14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 DCTN3O75935 186 aa14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 DDHD2O94830 711 aa14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 VAV1P15498 845 aa14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 ALDH7A1P49419 539 aaKnown RBP14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 PTPRRQ15256 657 aa14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 RBM23Q86U06 439 aaKnown RBP14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 APLFQ8IW19 511 aaPredicted RBP14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 HMX1Q9NP08 348 aaPredicted RBP14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 ZDHHC4Q9NPG8 344 aa14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 GMIPQ9P107 970 aa14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 HEY2Q9UBP5 337 aa14.4□□□□□ -0.1
TNFRSF11A-201ENST00000269485 ATP5HO75947 161 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 ITGA2BP08514 1039 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 PGM1P36871 562 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 MATKP42679 507 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 CCR10P46092 362 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 ACLYP53396 1101 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 MED21Q13503 144 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 MORF4L2Q15014 288 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 LIN52Q52LA3 116 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 ZNF467Q7Z7K2 595 aaPredicted RBP14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 CROCCP2Q86T23 111 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 KBTBD2Q8IY47 623 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 URGCPQ8TCY9 931 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 MYLIPQ8WY64 445 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 TSSK1BQ9BXA7 367 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 NDEL1Q9GZM8 345 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 CIDEBQ9UHD4 219 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 MOXD2PA6NHM9 499 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 FOXD2O60548 495 aaPredicted RBP14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 SLC10A3P09131 477 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 CSH1P0DML2 217 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 CSH2P0DML3 217 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 ITGA9Q13797 1035 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 USP10Q14694 798 aaKnown RBP14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 FAM187BQ17R55 369 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 LGSNQ5TDP6 509 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 C1orf146Q5VVC0 180 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 IYDQ6PHW0 289 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 RGS9BPQ6ZS82 235 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 MCRS1Q96EZ8 462 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 CATSPER2Q96P56 530 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 GTSE1Q9NYZ3 720 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 ANGPTL2Q9UKU9 493 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 KIF13BQ9NQT8 1826 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 L1CAMP32004 1257 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 SH3BGRP55822 239 aaPredicted RBP14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 TAF10Q12962 218 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 PLD1Q13393 1074 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 UBR7Q8N806 425 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 SRPK1Q96SB4 655 aaKnown RBP14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 CENPOQ9BU64 300 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 COLEC11Q9BWP8 271 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 TASP1Q9H6P5 420 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 LIN28AQ9H9Z2 209 aaKnown RBP14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 CLUHO75153 1309 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 GVINP1Q7Z2Y8 2422 aa14.39□□□□□ -0.11
TNFRSF11A-201ENST00000269485 MYL2P10916 166 aa14.38□□□□□ -0.11
TNFRSF11A-201ENST00000269485 CCDC15Q0P6D6 951 aa14.38□□□□□ -0.11
TNFRSF11A-201ENST00000269485 RFWD2Q8NHY2 731 aa14.38□□□□□ -0.11
TNFRSF11A-201ENST00000269485 ZNF184Q99676 751 aaPredicted RBP14.38□□□□□ -0.11
TNFRSF11A-201ENST00000269485 TLK1Q9UKI8 766 aa14.38□□□□□ -0.11
TNFRSF11A-201ENST00000269485 SH3GLB1Q9Y371 365 aa14.38□□□□□ -0.11
TNFRSF11A-201ENST00000269485 DNAH14Q0VDD8 3507 aa14.38□□□□□ -0.11
TNFRSF11A-201ENST00000269485 SPEGQ15772 3267 aa14.38□□□□□ -0.11
TNFRSF11A-201ENST00000269485 HAUS5O94927 633 aa14.38□□□□□ -0.11
TNFRSF11A-201ENST00000269485 ARFIP2P53365 341 aa14.38□□□□□ -0.11
TNFRSF11A-201ENST00000269485 CNGA3Q16281 694 aa14.38□□□□□ -0.11
TNFRSF11A-201ENST00000269485 UNC5AQ6ZN44 842 aa14.38□□□□□ -0.11
TNFRSF11A-201ENST00000269485 CDHR3Q6ZTQ4 885 aa14.38□□□□□ -0.11
TNFRSF11A-201ENST00000269485 ARHGAP24Q8N264 748 aa14.38□□□□□ -0.11
TNFRSF11A-201ENST00000269485 LINC01465Q8N7H1 131 aa14.38□□□□□ -0.11
TNFRSF11A-201ENST00000269485 PRR11Q96HE9 360 aaPredicted RBP14.38□□□□□ -0.11
TNFRSF11A-201ENST00000269485 SMG9Q9H0W8 520 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms