RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 KLF16Q9BXK1 252 aaPredicted RBP15.68■□□□□ 0.1
COPS3-201ENST00000268717 NOL6Q9H6R4 1146 aaKnown RBP15.68■□□□□ 0.1
COPS3-201ENST00000268717 NDFIP2Q9NV92 336 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 SENP1Q9P0U3 644 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 PSMC3IPQ9P2W1 217 aaPredicted RBP15.68■□□□□ 0.1
COPS3-201ENST00000268717 ZC3H7BQ9UGR2 993 aaKnown RBP15.68■□□□□ 0.1
COPS3-201ENST00000268717 STOML2Q9UJZ1 356 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 TNFRSF10AO00220 468 aa15.67■□□□□ 0.1
COPS3-201ENST00000268717 CPP00450 1065 aa15.67■□□□□ 0.1
COPS3-201ENST00000268717 JCHAINP01591 159 aa15.67■□□□□ 0.1
COPS3-201ENST00000268717 HMBSP08397 361 aa15.67■□□□□ 0.1
COPS3-201ENST00000268717 HOXB8P17481 243 aaPredicted RBP15.67■□□□□ 0.1
COPS3-201ENST00000268717 GCAP28676 217 aa15.67■□□□□ 0.1
COPS3-201ENST00000268717 SSTR1P30872 391 aa15.67■□□□□ 0.1
COPS3-201ENST00000268717 HPDP32754 393 aaPredicted RBP15.67■□□□□ 0.1
COPS3-201ENST00000268717 PAPOLAP51003 745 aaKnown RBP15.67■□□□□ 0.1
COPS3-201ENST00000268717 HNRNPDQ14103 355 aaKnown RBP15.67■□□□□ 0.1
COPS3-201ENST00000268717 FAM133BQ5BKY9 247 aaKnown RBP15.67■□□□□ 0.1
COPS3-201ENST00000268717 RABGAP1LQ5R372 815 aa15.67■□□□□ 0.1
COPS3-201ENST00000268717 STEAP4Q687X5 459 aa15.67■□□□□ 0.1
COPS3-201ENST00000268717 SYCE2Q6PIF2 218 aa15.67■□□□□ 0.1
COPS3-201ENST00000268717 TMEM150AQ86TG1 271 aa15.67■□□□□ 0.1
COPS3-201ENST00000268717 IGDCC3Q8IVU1 814 aa15.67■□□□□ 0.1
COPS3-201ENST00000268717 SLC22A17Q8WUG5 538 aa15.67■□□□□ 0.1
COPS3-201ENST00000268717 IGSF8Q969P0 613 aa15.67■□□□□ 0.1
COPS3-201ENST00000268717 FCRL5Q96RD9 977 aa15.67■□□□□ 0.1
COPS3-201ENST00000268717 GORASP1Q9BQQ3 440 aa15.67■□□□□ 0.1
COPS3-201ENST00000268717 CEP41Q9BYV8 373 aa15.67■□□□□ 0.1
COPS3-201ENST00000268717 LRRC40Q9H9A6 602 aa15.67■□□□□ 0.1
COPS3-201ENST00000268717 IPO11Q9UI26 975 aaKnown RBP15.67■□□□□ 0.1
COPS3-201ENST00000268717 AAR2Q9Y312 384 aaKnown RBP15.67■□□□□ 0.1
COPS3-201ENST00000268717 NUP205Q92621 2012 aa15.67■□□□□ 0.1
COPS3-201ENST00000268717 TCRBV9S1A1TA0A576 114 aa15.66■□□□□ 0.1
COPS3-201ENST00000268717 SDR42E2A6NKP2 422 aa15.66■□□□□ 0.1
COPS3-201ENST00000268717 RASA4BC9J798 803 aa15.66■□□□□ 0.1
COPS3-201ENST00000268717 RASA4O43374 803 aa15.66■□□□□ 0.1
COPS3-201ENST00000268717 RAMP2O60895 175 aa15.66■□□□□ 0.1
COPS3-201ENST00000268717 AVILO75366 819 aa15.66■□□□□ 0.1
COPS3-201ENST00000268717 STC2O76061 302 aa15.66■□□□□ 0.1
COPS3-201ENST00000268717 CNTN5O94779 1100 aa15.66■□□□□ 0.1
COPS3-201ENST00000268717 EPCAMP16422 314 aa15.66■□□□□ 0.1
COPS3-201ENST00000268717 PRKCHP24723 683 aa15.66■□□□□ 0.1
COPS3-201ENST00000268717 CLCN4P51793 760 aa15.66■□□□□ 0.1
COPS3-201ENST00000268717 ALFQ53S48 1182 aa15.66■□□□□ 0.1
COPS3-201ENST00000268717 HP1BP3Q5SSJ5 553 aaPredicted RBP15.66■□□□□ 0.1
COPS3-201ENST00000268717 TTC39BQ5VTQ0 682 aaPredicted RBP15.66■□□□□ 0.1
COPS3-201ENST00000268717 ARMC3Q5W041 872 aa15.66■□□□□ 0.1
COPS3-201ENST00000268717 ZNF449Q6P9G9 518 aa15.66■□□□□ 0.1
COPS3-201ENST00000268717 FBF1Q8TES7 1133 aa15.66■□□□□ 0.1
COPS3-201ENST00000268717 DEPDC1BQ8WUY9 529 aa15.66■□□□□ 0.1
COPS3-201ENST00000268717 ARHGEF2Q92974 986 aaKnown RBP15.66■□□□□ 0.1
COPS3-201ENST00000268717 XPO6Q96QU8 1125 aaKnown RBP15.66■□□□□ 0.1
COPS3-201ENST00000268717 S1PR5Q9H228 398 aa15.66■□□□□ 0.1
COPS3-201ENST00000268717 IL21Q9HBE4 155 aa15.66■□□□□ 0.1
COPS3-201ENST00000268717 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.66■□□□□ 0.1
COPS3-201ENST00000268717 PRKAG3Q9UGI9 489 aa15.66■□□□□ 0.1
COPS3-201ENST00000268717 ANXA9O76027 345 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 LRG1P02750 347 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 NFKB1P19838 968 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 MDH1P40925 334 aaKnown RBP15.65■□□□□ 0.1
COPS3-201ENST00000268717 RENBPP51606 427 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 CDH4P55283 916 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 FRG1Q14331 258 aaKnown RBP15.65■□□□□ 0.1
COPS3-201ENST00000268717 SYCP2LQ5T4T6 812 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 ADGRD1Q6QNK2 874 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 ARHGAP36Q6ZRI8 547 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 CHST9Q7L1S5 443 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 LINC00523Q86TU6 105 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 EXOC3L1Q86VI1 746 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 CNTD1Q8N815 330 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 GSDMBQ8TAX9 411 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 SUSD6Q92537 303 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 CENPTQ96BT3 561 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 AGAP3Q96P47 875 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 GLOD4Q9HC38 313 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 CASS4Q9NQ75 786 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 USP15Q9Y4E8 981 aaPredicted RBP15.65■□□□□ 0.1
COPS3-201ENST00000268717 C2orf16Q68DN1 1984 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 CLDN11O75508 207 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 PEX11BO96011 259 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 GLUD1P00367 558 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 PGAM1P18669 254 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 ATP1A2P50993 1020 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 IRAK1P51617 712 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 ZP2Q05996 745 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 IL10RBQ08334 325 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 ADGRF1Q5T601 910 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 NAPEPLDQ6IQ20 393 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 TFAP2DQ7Z6R9 452 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 TMC8Q8IU68 726 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 ADHFE1Q8IWW8 467 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 ELMOD1Q8N336 334 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 TEX26Q8N6G2 289 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 KREMEN2Q8NCW0 462 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 STAMBPL1Q96FJ0 436 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 ZFRQ96KR1 1074 aaKnown RBP15.65■□□□□ 0.1
COPS3-201ENST00000268717 ZNF599Q96NL3 588 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 PAFAH2Q99487 392 aa15.65■□□□□ 0.1
COPS3-201ENST00000268717 MLPHQ9BV36 600 aaPredicted RBP15.65■□□□□ 0.1
COPS3-201ENST00000268717 MAGEH1Q9H213 219 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms