RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 AMIGO2Q86SJ2 522 aa16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 TMEM110Q86TL2 294 aa16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 RAB3IL1Q8TBN0 382 aa16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 CLEC4CQ8WTT0 213 aa16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 PLAC1Q9HBJ0 212 aa16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 PNPLA8Q9NP80 782 aa16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 ASNSD1Q9NWL6 643 aa16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 RRN3Q9NYV6 651 aa16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 PSMD13Q9UNM6 376 aa16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 ST3GAL5Q9UNP4 418 aa16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 C2CD4BA6NLJ0 364 aa16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 GABBR2O75899 941 aa16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 LMO2P25791 158 aa16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 ADORA2BP29275 332 aa16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 CD52P31358 61 aa16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 SLC1A6P48664 564 aa16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 IDH3AP50213 366 aa16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 ZNF143P52747 638 aaPredicted RBP16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 PFKPQ01813 784 aa16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 TEDDM1Q5T9Z0 273 aa16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 SLC27A1Q6PCB7 646 aa16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 DARS2Q6PI48 645 aaKnown RBP16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 ERI1Q8IV48 349 aaKnown RBP16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 CROCCP3Q8IVE0 287 aa16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 CMASQ8NFW8 434 aaPredicted RBP16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 DEFB118Q96PH6 123 aa16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 HNRNPABQ99729 332 aaKnown RBP16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 HMX1Q9NP08 348 aaPredicted RBP16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 MCF2LO15068 1137 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 CCDC130P13994 396 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 CRHR1P34998 444 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 ATXN1P54253 815 aaKnown RBP16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 TGFBIQ15582 683 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 ADRM1Q16186 407 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 POTEHQ6S545 545 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 ARCQ7LC44 396 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 AHI1Q8N157 1196 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 TMIGD2Q96BF3 282 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 CMTM5Q96DZ9 223 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 ZNF696Q9H7X3 374 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 RAB6BQ9NRW1 208 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 RSL24D1Q9UHA3 163 aaKnown RBP16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 RAB26Q9ULW5 256 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 ADAM23O75077 832 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 CBFA2T3O75081 653 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 KRT38O76015 456 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 FBXO21O94952 628 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 GSTT2P0CG29 244 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 GSTT2BP0CG30 244 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 NR1H2P55055 460 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 CCDC14Q49A88 953 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 MBLAC2Q68D91 279 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 TRMT10BQ6PF06 316 aaKnown RBP16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 CYP4V2Q6ZWL3 525 aaPredicted RBP16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 RNF180Q86T96 592 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 GALNT4Q8N4A0 578 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 SNX27Q96L92 541 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 CNPY3Q9BT09 278 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 UPF3AQ9H1J1 476 aaKnown RBP16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 NRDE2Q9H7Z3 1164 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 PLGRKTQ9HBL7 147 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 POPDC2Q9HBU9 364 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 PLK2Q9NYY3 685 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 C6orf203Q9P0P8 240 aaPredicted RBP16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 TMED5Q9Y3A6 229 aa16.25■□□□□ 0.19
MAP1LC3B-201ENST00000268607 LSM1O15116 133 aaKnown RBP16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 DCXO43602 365 aa16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 PRPSAP2O60256 369 aa16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 GSRP00390 522 aa16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 FAM58BPP0C7Q3 252 aa16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 THRAP10827 490 aa16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 MSX2P35548 267 aaPredicted RBP16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 MRPS22P82650 360 aaKnown RBP16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 CDKL1Q00532 357 aa16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 IRF5Q13568 498 aa16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 PDK1Q15118 436 aa16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 CA9Q16790 459 aa16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 SOWAHAQ2M3V2 549 aa16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 NOTUMQ6P988 496 aa16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 BORAQ6PGQ7 559 aa16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 ELMSAN1Q6PJG2 1045 aa16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 LRGUKQ96M69 825 aa16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 BEGAINQ9BUH8 593 aa16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 THEGQ9P2T0 379 aa16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 APOC4-APOC2K7ER74 178 aa16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 SPTLC1O15269 473 aa16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 XPOTO43592 962 aaKnown RBP16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 FOXD2O60548 495 aaPredicted RBP16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 APOC2P02655 101 aa16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 FGF3P11487 239 aaPredicted RBP16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 CD1EP15812 388 aa16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 MRPS6P82932 125 aaKnown RBP16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 APOFQ13790 326 aa16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 KYAT1Q16773 422 aa16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 PPP6R3Q5H9R7 873 aaPredicted RBP16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 RARS2Q5T160 578 aaKnown RBP16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 NANOGNBQ7Z5D8 188 aa16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 NDRG1Q92597 394 aaKnown RBP16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 PPP1R10Q96QC0 940 aaKnown RBP16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 FRMD8P1Q9BZ68 369 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms