RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 PLOD1Q02809 727 aaPredicted RBP7.95□□□□□ -1.14
USP3-201ENST00000268049 SIM2Q14190 667 aaPredicted RBP7.95□□□□□ -1.14
USP3-201ENST00000268049 CCDC142Q17RM4 750 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 PTCRAQ6ISU1 281 aaPredicted RBP7.95□□□□□ -1.14
USP3-201ENST00000268049 MFSD5Q6N075 450 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 ZCCHC8Q6NZY4 707 aaKnown RBP7.95□□□□□ -1.14
USP3-201ENST00000268049 CLEC4FQ8N1N0 589 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 POF1BQ8WVV4 589 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 ING5Q8WYH8 240 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 MCCC2Q9HCC0 563 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 RGS18Q9NS28 235 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 CORO1CQ9ULV4 474 aaPredicted RBP7.95□□□□□ -1.14
USP3-201ENST00000268049 CA14Q9ULX7 337 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 TDRKHQ9Y2W6 561 aaKnown RBP7.95□□□□□ -1.14
USP3-201ENST00000268049 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.95□□□□□ -1.14
USP3-201ENST00000268049 BAZ2BQ9UIF8 2168 aaKnown RBP7.95□□□□□ -1.14
USP3-201ENST00000268049 FOXN1O15353 648 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 CER1O95813 267 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 MLNP12872 115 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 CDH2P19022 906 aaPredicted RBP7.94□□□□□ -1.14
USP3-201ENST00000268049 CCND3P30281 292 aaPredicted RBP7.94□□□□□ -1.14
USP3-201ENST00000268049 CENPAP49450 140 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 PEX5P50542 639 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 CSTF1Q05048 431 aaKnown RBP7.94□□□□□ -1.14
USP3-201ENST00000268049 STK4Q13043 487 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 GSTA3Q16772 222 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 KCNT2Q6UVM3 1135 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 C16orf62Q7Z3J2 963 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 LRRC34Q8IZ02 419 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 ZCCHC7Q8N3Z6 543 aaKnown RBP7.94□□□□□ -1.14
USP3-201ENST00000268049 IL31RAQ8NI17 732 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 UBE2E3Q969T4 207 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 UHRF1Q96T88 793 aaPredicted RBP7.94□□□□□ -1.14
USP3-201ENST00000268049 IRX2Q9BZI1 471 aaPredicted RBP7.94□□□□□ -1.14
USP3-201ENST00000268049 BTBD1Q9H0C5 482 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 CLEC4MQ9H2X3 399 aaPredicted RBP7.94□□□□□ -1.14
USP3-201ENST00000268049 INTS10Q9NVR2 710 aaKnown RBP7.94□□□□□ -1.14
USP3-201ENST00000268049 FTSJ1Q9UET6 329 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 DUOX1Q9NRD9 1551 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 CBFA2T3O75081 653 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 KLHL2O95198 593 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 GPC1P35052 558 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 FNTAP49354 379 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 CREB5Q02930 508 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 FOXM1Q08050 763 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 FCHO2Q0JRZ9 810 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 GRB10Q13322 594 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 TMEM63BQ5T3F8 832 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 B3GNT6Q6ZMB0 384 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 USP49Q70CQ1 688 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 CHST9Q7L1S5 443 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 CAND1Q86VP6 1230 aaKnown RBP7.94□□□□□ -1.14
USP3-201ENST00000268049 KRT73Q86Y46 540 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 SLC25A41Q8N5S1 370 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 OR2W6PQ8NHA6 318 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 SIPA1Q96FS4 1042 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 MRPL1Q9BYD6 325 aaKnown RBP7.94□□□□□ -1.14
USP3-201ENST00000268049 PRDM12Q9H4Q4 367 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 TMEM134Q9H6X4 195 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 SCN3BQ9NY72 215 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 SUCOQ9UBS9 1254 aaKnown RBP7.94□□□□□ -1.14
USP3-201ENST00000268049 ZNF214Q9UL59 606 aaPredicted RBP7.94□□□□□ -1.14
USP3-201ENST00000268049 DERAQ9Y315 318 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 ADGRA3Q8IWK6 1321 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 NRAPQ86VF7 1730 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 NUP98P52948 1817 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 C1orf232A0A0U1RR37 186 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 TRIM24O15164 1050 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 ATP6V1G1O75348 118 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 CSDE1O75534 798 aaKnown RBP7.94□□□□□ -1.14
USP3-201ENST00000268049 ENDOD1O94919 500 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 SLC35G4P0C7Q5 338 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 RARRES1P49788 294 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 POU5F1BQ06416 359 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 PAOXQ6QHF9 649 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 UNC93AQ86WB7 457 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 TRAPPC5Q8IUR0 188 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 CCDC60Q8IWA6 550 aaPredicted RBP7.94□□□□□ -1.14
USP3-201ENST00000268049 SNF8Q96H20 258 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 OSBPL8Q9BZF1 889 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 KLHL4Q9C0H6 718 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 EXOSC4Q9NPD3 245 aaKnown RBP7.94□□□□□ -1.14
USP3-201ENST00000268049 TMEM120BA0PK00 339 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 GSAPA4D1B5 854 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 SLITRK3O94933 977 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 BCL10O95999 233 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 IGHEP01854 428 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 RARGP13631 454 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 ATAD3BQ5T9A4 648 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 BPIFB1Q8TDL5 484 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 PHF21AQ96BD5 680 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 MSANTD3Q96H12 275 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 SGIP1Q9BQI5 828 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 ZNF576Q9H609 170 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 CDC14AQ9UNH5 594 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 HEBP2Q9Y5Z4 205 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 CDY1Q9Y6F8 540 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 COMMD3-BMI1R4GMX3 469 aa7.94□□□□□ -1.14
USP3-201ENST00000268049 MARF1Q9Y4F3 1742 aaKnown RBP7.94□□□□□ -1.14
USP3-201ENST00000268049 A0A0B4J269 797 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms