RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 CUL2Q13617 745 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 CRTC3Q6UUV7 619 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 KCNMB4Q86W47 210 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 WDCPQ9H6R7 721 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 DPP3Q9NY33 737 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 AHSPQ9NZD4 102 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 ASB14A6NK59 587 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 MSH4O15457 936 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 RECQL5O94762 991 aaPredicted RBP11.31□□□□□ -0.6
CHFR-201ENST00000266880 METTL18O95568 372 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 ITGA4P13612 1032 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 FAAP100Q0VG06 881 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 SPOCD1Q6ZMY3 1216 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 NFKBIZQ9BYH8 718 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 TDRKHQ9Y2W6 561 aaKnown RBP11.31□□□□□ -0.6
CHFR-201ENST00000266880 STARD13Q9Y3M8 1113 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 THRBP10828 461 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 GPSM2P81274 684 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 PSMD5Q16401 504 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 MTX3Q5HYI7 312 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 NEK6Q9HC98 313 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 PPP1R3GB7ZBB8 358 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 WRBO00258 174 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 KIAA0391O15091 583 aaKnown RBP11.31□□□□□ -0.6
CHFR-201ENST00000266880 SDC2P34741 201 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 MAD2L1Q13257 205 aaPredicted RBP11.31□□□□□ -0.6
CHFR-201ENST00000266880 PAGE2BQ5JRK9 111 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 CIR1Q86X95 450 aaPredicted RBP11.31□□□□□ -0.6
CHFR-201ENST00000266880 C12orf56Q8IXR9 622 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 SCAIQ8N9R8 606 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 TRNT1Q96Q11 434 aaKnown RBP11.31□□□□□ -0.6
CHFR-201ENST00000266880 RPS6KA6Q9UK32 745 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 RBM7Q9Y580 266 aaKnown RBP11.31□□□□□ -0.6
CHFR-201ENST00000266880 MRPL42Q9Y6G3 142 aaKnown RBP11.31□□□□□ -0.6
CHFR-201ENST00000266880 JCHAINP01591 159 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 DLG4P78352 724 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 PYHIN1Q6K0P9 492 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 TMC7Q7Z402 723 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 OR56A4Q8NGH8 313 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 ELMO1Q92556 727 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 MGAT4AQ9UM21 535 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 DHFRP00374 187 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 CYP2E1P05181 493 aaPredicted RBP11.3□□□□□ -0.6
CHFR-201ENST00000266880 CYP20A1Q6UW02 462 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 FCRL4Q96PJ5 515 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 CHIAQ9BZP6 476 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 MAT2BQ9NZL9 334 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 ZNF232Q9UNY5 417 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 ZSCAN5CA6NGD5 496 aaPredicted RBP11.3□□□□□ -0.6
CHFR-201ENST00000266880 SGTAO43765 313 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 KCNA6P17658 529 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 CD151P48509 253 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 C6orf52Q5T4I8 152 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 GRTP1Q5TC63 336 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 HLA-DQA1Q5Y7H0 255 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 SPAG16Q8N0X2 631 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 ZSCAN5AQ9BUG6 496 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 PTPRTO14522 1441 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 CAMTA2O94983 1202 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 PON1P27169 355 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 POLNQ7Z5Q5 900 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 CPNE1Q99829 537 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 E7ENX8 843 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 F5H5T6 163 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 C2CD2LO14523 706 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 PSME3P61289 254 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 TTI2Q6NXR4 508 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 GALNT5Q7Z7M9 940 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 AMIGO2Q86SJ2 522 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 ZZZ3Q8IYH5 903 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 TBC1D21Q8IYX1 336 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 TEX47Q8TBZ9 253 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 ACTRT1Q8TDG2 376 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 CELF6Q96J87 481 aaKnown RBP11.3□□□□□ -0.6
CHFR-201ENST00000266880 AP2A2O94973 939 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 MGAT1P26572 445 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 FAUP35544 74 aaKnown RBP11.3□□□□□ -0.6
CHFR-201ENST00000266880 MED22Q15528 200 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 XPNPEP3Q9NQH7 507 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 POFUT2Q9Y2G5 429 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 SAMHD1Q9Y3Z3 626 aaKnown RBP11.3□□□□□ -0.6
CHFR-201ENST00000266880 PRAMEF33A0A0G2JMD5 474 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 C2orf74A8MZ97 194 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 SNAP91O60641 907 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 PRAMEF10O60809 474 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 CRTAMO95727 393 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 COX4I1P13073 169 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 CYP11B1P15538 503 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 TYMPP19971 482 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 RPL21P46778 160 aaKnown RBP11.3□□□□□ -0.6
CHFR-201ENST00000266880 BOLA3Q53S33 107 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 DEF8Q6ZN54 512 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 ATP6V0D2Q8N8Y2 350 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 GIT1Q9Y2X7 761 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 PGAM1P18669 254 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 TKTP29401 623 aaKnown RBP11.3□□□□□ -0.6
CHFR-201ENST00000266880 RPL4P36578 427 aaKnown RBP11.3□□□□□ -0.6
CHFR-201ENST00000266880 PDIA5Q14554 519 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 TNFAIP8L3Q5GJ75 292 aa11.3□□□□□ -0.6
CHFR-201ENST00000266880 LCN1P1Q5VSP4 162 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms