RNA–Protein interactions for RNA: ENST00000264638.8

CNTNAP1-201, Transcript of contactin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP1, Length 5,276 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-201ENST00000264638 KCNK4Q9NYG8 393 aa13.52□□□□□ -0.24
CNTNAP1-201ENST00000264638 SIGLEC16A6NMB1 481 aa13.52□□□□□ -0.24
CNTNAP1-201ENST00000264638 PCDH8O95206 1070 aa13.52□□□□□ -0.24
CNTNAP1-201ENST00000264638 USP17L7P0C7H9 530 aa13.52□□□□□ -0.24
CNTNAP1-201ENST00000264638 DDX39BQ13838 428 aaKnown RBP13.52□□□□□ -0.24
CNTNAP1-201ENST00000264638 RRP1BQ14684 758 aaKnown RBP13.52□□□□□ -0.24
CNTNAP1-201ENST00000264638 NR1D2Q14995 579 aa13.52□□□□□ -0.24
CNTNAP1-201ENST00000264638 MFSD7Q6UXD7 560 aa13.52□□□□□ -0.24
CNTNAP1-201ENST00000264638 CASP12Q6UXS9 341 aa13.52□□□□□ -0.24
CNTNAP1-201ENST00000264638 KIAA0408Q6ZU52 694 aa13.52□□□□□ -0.24
CNTNAP1-201ENST00000264638 MOB2Q70IA6 237 aa13.52□□□□□ -0.24
CNTNAP1-201ENST00000264638 KATNAL2Q8IYT4 538 aa13.52□□□□□ -0.24
CNTNAP1-201ENST00000264638 PHACTR4Q8IZ21 702 aa13.52□□□□□ -0.24
CNTNAP1-201ENST00000264638 AMER2Q8N7J2 671 aa13.52□□□□□ -0.24
CNTNAP1-201ENST00000264638 TKTL2Q9H0I9 626 aa13.52□□□□□ -0.24
CNTNAP1-201ENST00000264638 MSRAQ9UJ68 235 aa13.52□□□□□ -0.24
CNTNAP1-201ENST00000264638 TSPAN3O60637 253 aa13.52□□□□□ -0.25
CNTNAP1-201ENST00000264638 ANXA6P08133 673 aa13.52□□□□□ -0.25
CNTNAP1-201ENST00000264638 MSH3P20585 1137 aa13.52□□□□□ -0.25
CNTNAP1-201ENST00000264638 GP5P40197 560 aa13.52□□□□□ -0.25
CNTNAP1-201ENST00000264638 HK2P52789 917 aa13.52□□□□□ -0.25
CNTNAP1-201ENST00000264638 SGCGQ13326 291 aa13.52□□□□□ -0.25
CNTNAP1-201ENST00000264638 PHKG1Q16816 387 aa13.52□□□□□ -0.25
CNTNAP1-201ENST00000264638 IL31RAQ8NI17 732 aa13.52□□□□□ -0.25
CNTNAP1-201ENST00000264638 UTP15Q8TED0 518 aaKnown RBP13.52□□□□□ -0.25
CNTNAP1-201ENST00000264638 GDF3Q9NR23 364 aa13.52□□□□□ -0.25
CNTNAP1-201ENST00000264638 NDUFAF1Q9Y375 327 aa13.52□□□□□ -0.25
CNTNAP1-201ENST00000264638 TMEM88BA6NKF7 163 aa13.52□□□□□ -0.25
CNTNAP1-201ENST00000264638 RGS20O76081 388 aa13.52□□□□□ -0.25
CNTNAP1-201ENST00000264638 FYNP06241 537 aa13.52□□□□□ -0.25
CNTNAP1-201ENST00000264638 EPB42P16452 691 aa13.52□□□□□ -0.25
CNTNAP1-201ENST00000264638 CCNA2P20248 432 aa13.52□□□□□ -0.25
CNTNAP1-201ENST00000264638 PPM1AP35813 382 aa13.52□□□□□ -0.25
CNTNAP1-201ENST00000264638 GRM5P41594 1212 aa13.52□□□□□ -0.25
CNTNAP1-201ENST00000264638 TBX2Q13207 712 aaPredicted RBP13.52□□□□□ -0.25
CNTNAP1-201ENST00000264638 SPANXN3Q5MJ09 141 aa13.52□□□□□ -0.25
CNTNAP1-201ENST00000264638 C11orf74Q86VG3 221 aa13.52□□□□□ -0.25
CNTNAP1-201ENST00000264638 DENND6AQ8IWF6 608 aa13.52□□□□□ -0.25
CNTNAP1-201ENST00000264638 MTMR14Q8NCE2 650 aa13.52□□□□□ -0.25
CNTNAP1-201ENST00000264638 EPS8L1Q8TE68 723 aa13.52□□□□□ -0.25
CNTNAP1-201ENST00000264638 AGAP11Q8TF27 550 aa13.52□□□□□ -0.25
CNTNAP1-201ENST00000264638 CENPIQ92674 756 aaPredicted RBP13.52□□□□□ -0.25
CNTNAP1-201ENST00000264638 INPP4BO15327 924 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 VPS4BO75351 444 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 CSH1P0DML2 217 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 CSH2P0DML3 217 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 ZBTB48P10074 688 aaPredicted RBP13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 SKIV2L2P42285 1042 aaKnown RBP13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 CDK7P50613 346 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 OTUD3Q5T2D3 398 aaPredicted RBP13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 LRRC38Q5VT99 294 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 CDC73Q6P1J9 531 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 ZNF554Q86TJ5 538 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 LRRC52Q8N7C0 313 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 CSGALNACT1Q8TDX6 532 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 CHKBQ9Y259 395 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 SIK3Q9Y2K2 1263 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 BAZ2BQ9UIF8 2168 aaKnown RBP13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 UBR1Q8IWV7 1749 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 ERI2A8K979 691 aaKnown RBP13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 MRASO14807 208 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 HECTD3Q5T447 861 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 GRTP1Q5TC63 336 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 STK32CQ86UX6 486 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 TSPAN14Q8NG11 270 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 SEPHS2Q99611 448 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 SLC25A23Q9BV35 468 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 UBP1Q9NZI7 540 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 PTCH2Q9Y6C5 1203 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 SMIM22K7EJ46 135 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 NFICP08651 508 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 SNHG28P0DPA3 235 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 PGAM1P18669 254 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 MTTPP55157 894 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 BCL2L1Q07817 233 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 MZT2AQ6P582 158 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 DCLRE1AQ6PJP8 1040 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 LBX2Q6XYB7 198 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 PTAR1Q7Z6K3 402 aaPredicted RBP13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 C8orf59Q8N0T1 100 aaPredicted RBP13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 OR7A2PQ8NGA2 310 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 ANKRD49Q8WVL7 239 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 ST3GAL5Q9UNP4 418 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 SMIM35A0A1B0GVV1 85 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 MYL12BO14950 172 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 MYL12AP19105 171 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 GRIK3Q13003 919 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 POU6F1Q14863 301 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 BMT2Q1RMZ1 405 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 CES5AQ6NT32 575 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 FAM228AQ86W67 206 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 ZDHHC13Q8IUH4 622 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 FIBCD1Q8N539 461 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 NKX2-3Q8TAU0 364 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 TCP10LQ8TDR4 215 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 ZNF75CPQ92670 426 aaPredicted RBP13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 KAT2BQ92831 832 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 CCDC28BQ9BUN5 200 aa13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 C2orf49Q9BVC5 232 aaPredicted RBP13.51□□□□□ -0.25
CNTNAP1-201ENST00000264638 SPG21Q9NZD8 308 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms