RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 DOLKQ9UPQ8 538 aa8.43□□□□□ -1.06
GTF3C3-201ENST00000263956 ILVBLA1L0T0 632 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 LCHNA4D1U4 455 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 RFXAPO00287 272 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 PDE2AO00408 941 aaPredicted RBP8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 ALDH1A2O94788 518 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 ZSCAN5DPP0CG00 497 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 TPH1P17752 444 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 MAXP61244 160 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 USP46P62068 366 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 NTHL1P78549 312 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 IL10RBQ08334 325 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 MYLK4Q86YV6 388 aaPredicted RBP8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 MCUQ8NE86 351 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 FBXO36Q8NEA4 188 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 LRRC8CQ8TDW0 803 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 SNX19Q92543 992 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 ATXN7L3BQ96GX2 97 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 PIWIL1Q96J94 861 aaKnown RBP8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 SMG9Q9H0W8 520 aaKnown RBP8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 C2orf78A6NCI8 922 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 HMGB1P1B2RPK0 211 aaPredicted RBP8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 SNX2O60749 519 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 SERPINH1P50454 418 aaKnown RBP8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 MPP3Q13368 585 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 PDAP1Q13442 181 aaKnown RBP8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 USP10Q14694 798 aaKnown RBP8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 MSANTD2Q6P1R3 559 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 ZMIZ2Q8NF64 920 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 NKD2Q969F2 451 aaPredicted RBP8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 HMCESQ96FZ2 354 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 FAM167BQ9BTA0 163 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 VPS45Q9NRW7 570 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 NDRG2Q9UN36 371 aaKnown RBP8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 BCLAF3A2AJT9 711 aaKnown RBP8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 MATN3O15232 486 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 CHADO15335 359 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 TIMM44O43615 452 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 CDH16O75309 829 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 TROVE2P10155 538 aaKnown RBP eCLIP8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 ATP1A2P50993 1020 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 CDK18Q07002 472 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 NSUN2Q08J23 767 aaKnown RBP eCLIP8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 SLC12A1Q13621 1099 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 HNRNPDQ14103 355 aaKnown RBP8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 MS4A13Q5J8X5 152 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 SRRM1Q8IYB3 904 aaKnown RBP8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 SCML4Q8N228 414 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 EXT2Q93063 718 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 SHDQ96IW2 340 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 FOPNLQ96NB1 174 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 PBX4Q9BYU1 374 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 LOXHD1Q8IVV2 1947 aa8.42□□□□□ -1.06
GTF3C3-201ENST00000263956 A0A1W2PQ67 120 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 USP12O75317 370 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 DNTTP04053 509 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 EPHX1P07099 455 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 RPL21P46778 160 aaKnown RBP8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 RGS4P49798 205 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 DMC1Q14565 340 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 SETDB1Q15047 1291 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 ACOX1Q15067 660 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 ITPRIPL2Q3MIP1 535 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 LY6G5CQ5SRR4 150 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 RNF187Q5TA31 235 aaPredicted RBP8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 GLT6D1Q7Z4J2 308 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 TRMT2BQ96GJ1 504 aaKnown RBP8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 ELMO2Q96JJ3 720 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 C1orf74Q96LT6 269 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 QKIQ96PU8 341 aaKnown RBP eCLIP8.41□□□□□ -1.064e-7■■□□□ 13.7
GTF3C3-201ENST00000263956 SLC39A8Q9C0K1 460 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 RAD18Q9NS91 495 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 PKD2L2Q9NZM6 624 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 CDH7Q9ULB5 785 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 ZNFX1Q9P2E3 1918 aaKnown RBP8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 HEPACAM2A8MVW5 462 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 RNF40O75150 1001 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 LATS1O95835 1130 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 GLP2RO95838 553 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 PECAM1P16284 738 aaPredicted RBP8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 PEX5P50542 639 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 IRX4P78413 519 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 LINGO4Q6UY18 593 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 LRRC6Q86X45 466 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 CPNE8Q86YQ8 564 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 RAB42Q8N4Z0 105 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 ALKBH8Q96BT7 664 aaKnown RBP8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 LRRC39Q96DD0 335 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 ADAM7Q9H2U9 754 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 GDE1Q9NZC3 331 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 SENP1Q9P0U3 644 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 H3BQ06 376 aaPredicted RBP8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 CTIFO43310 598 aaKnown RBP8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 PRNPP04156 253 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 ETS1P14921 441 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 CHRM3P20309 590 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 MGAT1P26572 445 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 HADHAP40939 763 aa8.41□□□□□ -1.06
GTF3C3-201ENST00000263956 CSKP41240 450 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms