RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 SLC7A4O43246 635 aa16.45■□□□□ 0.22
USE1-201ENST00000263897 BNIP3LO60238 219 aa16.45■□□□□ 0.22
USE1-201ENST00000263897 ZMPSTE24O75844 475 aa16.45■□□□□ 0.22
USE1-201ENST00000263897 PLEKP08567 350 aaPredicted RBP16.45■□□□□ 0.22
USE1-201ENST00000263897 RHOQP17081 205 aa16.45■□□□□ 0.22
USE1-201ENST00000263897 GLDCP23378 1020 aa16.45■□□□□ 0.22
USE1-201ENST00000263897 RRM1P23921 792 aa16.45■□□□□ 0.22
USE1-201ENST00000263897 CLCN6P51797 869 aa16.45■□□□□ 0.22
USE1-201ENST00000263897 ADPRHP54922 357 aa16.45■□□□□ 0.22
USE1-201ENST00000263897 FAM193AP78312 1265 aa16.45■□□□□ 0.22
USE1-201ENST00000263897 SIM1P81133 766 aaPredicted RBP16.45■□□□□ 0.22
USE1-201ENST00000263897 GNA12Q03113 381 aa16.45■□□□□ 0.22
USE1-201ENST00000263897 FAM72AQ5TYM5 149 aa16.45■□□□□ 0.22
USE1-201ENST00000263897 FAM72DQ6L9T8 149 aa16.45■□□□□ 0.22
USE1-201ENST00000263897 LINGO4Q6UY18 593 aa16.45■□□□□ 0.22
USE1-201ENST00000263897 DBX2Q6ZNG2 339 aa16.45■□□□□ 0.22
USE1-201ENST00000263897 FAM72BQ86X60 149 aa16.45■□□□□ 0.22
USE1-201ENST00000263897 CCDC185Q8N715 623 aa16.45■□□□□ 0.22
USE1-201ENST00000263897 OR2A12Q8NGT7 310 aa16.45■□□□□ 0.22
USE1-201ENST00000263897 NTAN1Q96AB6 310 aa16.45■□□□□ 0.22
USE1-201ENST00000263897 VCPIP1Q96JH7 1222 aa16.45■□□□□ 0.22
USE1-201ENST00000263897 KDM4CQ9H3R0 1056 aa16.45■□□□□ 0.22
USE1-201ENST00000263897 TM7SF3Q9NS93 570 aa16.45■□□□□ 0.22
USE1-201ENST00000263897 TPX2Q9ULW0 747 aaKnown RBP16.45■□□□□ 0.22
USE1-201ENST00000263897 WASF3Q9UPY6 502 aa16.45■□□□□ 0.22
USE1-201ENST00000263897 SNX11Q9Y5W9 270 aa16.45■□□□□ 0.22
USE1-201ENST00000263897 MAP1BP46821 2468 aaKnown RBP16.45■□□□□ 0.22
USE1-201ENST00000263897 ANKRD62A6NC57 917 aa16.44■□□□□ 0.22
USE1-201ENST00000263897 LRRC53A6NM62 1247 aa16.44■□□□□ 0.22
USE1-201ENST00000263897 C1QTNF3-AMACRE9PGA6 284 aa16.44■□□□□ 0.22
USE1-201ENST00000263897 RTN2O75298 545 aa16.44■□□□□ 0.22
USE1-201ENST00000263897 CHRNA3P32297 505 aa16.44■□□□□ 0.22
USE1-201ENST00000263897 ZNF143P52747 638 aaPredicted RBP16.44■□□□□ 0.22
USE1-201ENST00000263897 RPL7AP62424 266 aaKnown RBP16.44■□□□□ 0.22
USE1-201ENST00000263897 CNTN1Q12860 1018 aa16.44■□□□□ 0.22
USE1-201ENST00000263897 FOXC1Q12948 553 aa16.44■□□□□ 0.22
USE1-201ENST00000263897 NR1I3Q14994 352 aa16.44■□□□□ 0.22
USE1-201ENST00000263897 KLHL40Q2TBA0 621 aa16.44■□□□□ 0.22
USE1-201ENST00000263897 KCNT1Q5JUK3 1230 aa16.44■□□□□ 0.22
USE1-201ENST00000263897 PPP1R15BQ5SWA1 713 aa16.44■□□□□ 0.22
USE1-201ENST00000263897 RETSATQ6NUM9 610 aa16.44■□□□□ 0.22
USE1-201ENST00000263897 RWDD4Q6NW29 188 aaKnown RBP16.44■□□□□ 0.22
USE1-201ENST00000263897 DNAJC24Q6P3W2 148 aa16.44■□□□□ 0.22
USE1-201ENST00000263897 SLFN11Q7Z7L1 901 aa16.44■□□□□ 0.22
USE1-201ENST00000263897 NLRP14Q86W24 1093 aa16.44■□□□□ 0.22
USE1-201ENST00000263897 NAXDQ8IW45 347 aa16.44■□□□□ 0.22
USE1-201ENST00000263897 DRC7Q8IY82 874 aa16.44■□□□□ 0.22
USE1-201ENST00000263897 TMIEQ8NEW7 156 aa16.44■□□□□ 0.22
USE1-201ENST00000263897 CCDC114Q96M63 670 aa16.44■□□□□ 0.22
USE1-201ENST00000263897 CAMK1GQ96NX5 476 aa16.44■□□□□ 0.22
USE1-201ENST00000263897 ATP13A1Q9HD20 1204 aa16.44■□□□□ 0.22
USE1-201ENST00000263897 TAS2R14Q9NYV8 317 aa16.44■□□□□ 0.22
USE1-201ENST00000263897 AIPL1Q9NZN9 384 aa16.44■□□□□ 0.22
USE1-201ENST00000263897 FNDC3AQ9Y2H6 1198 aaKnown RBP16.44■□□□□ 0.22
USE1-201ENST00000263897 PCDHGB2Q9Y5G2 931 aa16.44■□□□□ 0.22
USE1-201ENST00000263897 DOCK9Q9BZ29 2069 aa16.44■□□□□ 0.22
USE1-201ENST00000263897 SYCE3A1L190 88 aa16.43■□□□□ 0.22
USE1-201ENST00000263897 KCNK3O14649 394 aa16.43■□□□□ 0.22
USE1-201ENST00000263897 VILLO15195 856 aa16.43■□□□□ 0.22
USE1-201ENST00000263897 LATO43561 262 aa16.43■□□□□ 0.22
USE1-201ENST00000263897 PLRG1O43660 514 aaKnown RBP16.43■□□□□ 0.22
USE1-201ENST00000263897 LRIG2O94898 1065 aa16.43■□□□□ 0.22
USE1-201ENST00000263897 CTSLP07711 333 aa16.43■□□□□ 0.22
USE1-201ENST00000263897 CTSKP43235 329 aa16.43■□□□□ 0.22
USE1-201ENST00000263897 MAPKAPK2P49137 400 aa16.43■□□□□ 0.22
USE1-201ENST00000263897 SCAPQ12770 1279 aa16.43■□□□□ 0.22
USE1-201ENST00000263897 TRIP6Q15654 476 aaKnown RBP16.43■□□□□ 0.22
USE1-201ENST00000263897 POM121L1PQ3SYA9 428 aa16.43■□□□□ 0.22
USE1-201ENST00000263897 PPP1R2P3Q6NXS1 205 aa16.43■□□□□ 0.22
USE1-201ENST00000263897 SCYL2Q6P3W7 929 aa16.43■□□□□ 0.22
USE1-201ENST00000263897 LAYNQ6UX15 382 aa16.43■□□□□ 0.22
USE1-201ENST00000263897 ADAT2Q7Z6V5 191 aaKnown RBP16.43■□□□□ 0.22
USE1-201ENST00000263897 MCEEQ96PE7 176 aa16.43■□□□□ 0.22
USE1-201ENST00000263897 CNPY3Q9BT09 278 aa16.43■□□□□ 0.22
USE1-201ENST00000263897 ACE2Q9BYF1 805 aaPredicted RBP16.43■□□□□ 0.22
USE1-201ENST00000263897 EDEM3Q9BZQ6 932 aa16.43■□□□□ 0.22
USE1-201ENST00000263897 NDFIP2Q9NV92 336 aa16.43■□□□□ 0.22
USE1-201ENST00000263897 TMEM248Q9NWD8 314 aa16.43■□□□□ 0.22
USE1-201ENST00000263897 PCDHB9Q9Y5E1 797 aa16.43■□□□□ 0.22
USE1-201ENST00000263897 CHD5Q8TDI0 1954 aa16.43■□□□□ 0.22
USE1-201ENST00000263897 PLXNA2O75051 1894 aa16.43■□□□□ 0.22
USE1-201ENST00000263897 TMEM131Q92545 1883 aa16.42■□□□□ 0.22
USE1-201ENST00000263897 CXorf51AA0A1B0GTR3 108 aa16.42■□□□□ 0.22
USE1-201ENST00000263897 WNT9AO14904 365 aa16.42■□□□□ 0.22
USE1-201ENST00000263897 CCP110O43303 1012 aa16.42■□□□□ 0.22
USE1-201ENST00000263897 CBFA2T3O75081 653 aa16.42■□□□□ 0.22
USE1-201ENST00000263897 ZNF821O75541 412 aaPredicted RBP16.42■□□□□ 0.22
USE1-201ENST00000263897 SERPINC1P01008 464 aa16.42■□□□□ 0.22
USE1-201ENST00000263897 WNT1P04628 370 aa16.42■□□□□ 0.22
USE1-201ENST00000263897 CD38P28907 300 aa16.42■□□□□ 0.22
USE1-201ENST00000263897 L1CAMP32004 1257 aa16.42■□□□□ 0.22
USE1-201ENST00000263897 ETFBP38117 255 aa16.42■□□□□ 0.22
USE1-201ENST00000263897 C21orf59P57076 290 aa16.42■□□□□ 0.22
USE1-201ENST00000263897 ARF5P84085 180 aa16.42■□□□□ 0.22
USE1-201ENST00000263897 SUZ12Q15022 739 aaKnown RBP16.42■□□□□ 0.22
USE1-201ENST00000263897 ASIC2Q16515 512 aa16.42■□□□□ 0.22
USE1-201ENST00000263897 AGBL4Q5VU57 503 aa16.42■□□□□ 0.22
USE1-201ENST00000263897 SFMBT2Q5VUG0 894 aa16.42■□□□□ 0.22
USE1-201ENST00000263897 C22orf39Q6P5X5 142 aa16.42■□□□□ 0.22
USE1-201ENST00000263897 DCUN1D2Q6PH85 259 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms