RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 IREB2P48200 963 aaKnown RBP9.29□□□□□ -0.92
MSH4-201ENST00000263187 RALGDSQ12967 914 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 CYTH1Q15438 398 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 TBCCQ15814 346 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 FAM187BQ17R55 369 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 GRTP1Q5TC63 336 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 MAMDC4Q6UXC1 1216 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 TMC7Q7Z402 723 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 ARPINQ7Z6K5 226 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 LDB1Q86U70 411 aaPredicted RBP9.29□□□□□ -0.92
MSH4-201ENST00000263187 PSTKQ8IV42 348 aaKnown RBP9.29□□□□□ -0.92
MSH4-201ENST00000263187 OR6J1Q8NGC5 347 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 EXT2Q93063 718 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 NXNL1Q96CM4 212 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 SLC45A3Q96JT2 553 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 LRGUKQ96M69 825 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 NR1H4Q96RI1 486 aaPredicted RBP9.29□□□□□ -0.92
MSH4-201ENST00000263187 GPAMQ9HCL2 828 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 DNAJC28Q9NX36 388 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 DDX43Q9NXZ2 648 aaKnown RBP9.29□□□□□ -0.92
MSH4-201ENST00000263187 PCDHB12Q9Y5F1 795 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 CDY2AQ9Y6F7 541 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 CDY1Q9Y6F8 540 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 MYBPHLA2RUH7 354 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 DNAJA2O60884 412 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 CYP2C9P11712 490 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 RPL10P27635 214 aaKnown RBP9.29□□□□□ -0.92
MSH4-201ENST00000263187 CHRNA4P43681 627 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 LIMK2P53671 638 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 SNX16P57768 344 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 ART3Q13508 389 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 GPR162Q16538 588 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 SEL1L3Q68CR1 1132 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 PGM2L1Q6PCE3 622 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 GK5Q6ZS86 529 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 NT5DC4Q86YG4 428 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 CEP97Q8IW35 865 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 LPPQ93052 612 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 DCUN1D1Q96GG9 259 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 CENPKQ9BS16 269 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 IL1RL2Q9HB29 575 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.29□□□□□ -0.92
MSH4-201ENST00000263187 XPR1Q9UBH6 696 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 SHROOM3Q8TF72 1996 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 MOCS2O96007 188 aaPredicted RBP9.28□□□□□ -0.92
MSH4-201ENST00000263187 FYNP06241 537 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 ADRA1BP35368 520 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 HARS2P49590 506 aaKnown RBP9.28□□□□□ -0.92
MSH4-201ENST00000263187 LILRA4P59901 499 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 CACNB2Q08289 660 aaPredicted RBP9.28□□□□□ -0.92
MSH4-201ENST00000263187 CEACAM7Q14002 265 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 FSCBQ5H9T9 825 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 TWF2Q6IBS0 349 aaKnown RBP9.28□□□□□ -0.92
MSH4-201ENST00000263187 ESRP1Q6NXG1 681 aaKnown RBP9.28□□□□□ -0.92
MSH4-201ENST00000263187 CLEC20AQ6ZU45 233 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 PAQR9Q6ZVX9 377 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 ERO1BQ86YB8 467 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 FSTL5Q8N475 847 aaPredicted RBP9.28□□□□□ -0.92
MSH4-201ENST00000263187 RAB3IL1Q8TBN0 382 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 ACMSDQ8TDX5 336 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 PHF21BQ96EK2 531 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 PRPF18Q99633 342 aaKnown RBP9.28□□□□□ -0.92
MSH4-201ENST00000263187 SLC39A3Q9BRY0 314 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 TKTL2Q9H0I9 626 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 KCNU1A8MYU2 1149 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 AHSGP02765 367 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 SETSIPP0DME0 302 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 PTPN1P18031 435 aaKnown RBP9.28□□□□□ -0.92
MSH4-201ENST00000263187 CALRP27797 417 aaKnown RBP9.28□□□□□ -0.92
MSH4-201ENST00000263187 GABRB3P28472 473 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 TAF6P49848 677 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 MTTPP55157 894 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 CYLC2Q14093 348 aaPredicted RBP9.28□□□□□ -0.92
MSH4-201ENST00000263187 DGKDQ16760 1214 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 GSTA3Q16772 222 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 PPP1R3AQ16821 1122 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 FBXO48Q5FWF7 155 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 SPANXN3Q5MJ09 141 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 SH2D4BQ5SQS7 431 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 NOTUMQ6P988 496 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 ACAD11Q709F0 780 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 LILRA2Q8N149 483 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 KYQ8NBH2 561 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 WNT8BQ93098 351 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 PAAF1Q9BRP4 392 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 NFKBIZQ9BYH8 718 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 UBE2OQ9C0C9 1292 aaKnown RBP9.28□□□□□ -0.92
MSH4-201ENST00000263187 PLEKHA5Q9HAU0 1116 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 OR12D3Q9UGF7 316 aa9.28□□□□□ -0.92
MSH4-201ENST00000263187 TREHO43280 583 aa9.27□□□□□ -0.92
MSH4-201ENST00000263187 AP2A1O95782 977 aa9.27□□□□□ -0.92
MSH4-201ENST00000263187 MLNP12872 115 aa9.27□□□□□ -0.92
MSH4-201ENST00000263187 NPR3P17342 541 aa9.27□□□□□ -0.92
MSH4-201ENST00000263187 RPL14P50914 215 aaKnown RBP9.27□□□□□ -0.92
MSH4-201ENST00000263187 BEX3Q00994 111 aa9.27□□□□□ -0.92
MSH4-201ENST00000263187 ARHGAP17Q68EM7 881 aa9.27□□□□□ -0.92
MSH4-201ENST00000263187 RBM44Q6ZP01 1051 aaKnown RBP9.27□□□□□ -0.92
MSH4-201ENST00000263187 STRADAQ7RTN6 431 aa9.27□□□□□ -0.92
MSH4-201ENST00000263187 KBTBD6Q86V97 674 aa9.27□□□□□ -0.92
MSH4-201ENST00000263187 ZDHHC17Q8IUH5 632 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms