RNA–Protein interactions for RNA: ENST00000262963.10

PTPRS-201, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 5 BASIC

Gene PTPRS, Length 4,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-201ENST00000262963 HPS4Q9NQG7 708 aa12.29□□□□□ -0.44
PTPRS-201ENST00000262963 VPS51Q9UID3 782 aa12.29□□□□□ -0.44
PTPRS-201ENST00000262963 ADAM28Q9UKQ2 775 aa12.29□□□□□ -0.44
PTPRS-201ENST00000262963 TNPO3Q9Y5L0 923 aaKnown RBP12.29□□□□□ -0.44
PTPRS-201ENST00000262963 C5P01031 1676 aa12.29□□□□□ -0.44
PTPRS-201ENST00000262963 ZNF142P52746 1687 aaPredicted RBP12.29□□□□□ -0.44
PTPRS-201ENST00000262963 AGPSO00116 658 aa12.29□□□□□ -0.44
PTPRS-201ENST00000262963 PHGDHO43175 533 aaKnown RBP12.29□□□□□ -0.44
PTPRS-201ENST00000262963 DCXO43602 365 aa12.29□□□□□ -0.44
PTPRS-201ENST00000262963 ERVK-10P10266 1014 aa12.29□□□□□ -0.44
PTPRS-201ENST00000262963 DARSP14868 501 aaKnown RBP12.29□□□□□ -0.44
PTPRS-201ENST00000262963 MAPK8P45983 427 aa12.29□□□□□ -0.44
PTPRS-201ENST00000262963 HIRAP54198 1017 aaPredicted RBP12.29□□□□□ -0.44
PTPRS-201ENST00000262963 PREPLQ4J6C6 727 aaPredicted RBP12.29□□□□□ -0.44
PTPRS-201ENST00000262963 ATG16L2Q8NAA4 619 aa12.29□□□□□ -0.44
PTPRS-201ENST00000262963 LRRN4Q8WUT4 740 aa12.29□□□□□ -0.44
PTPRS-201ENST00000262963 SH3BP4Q9P0V3 963 aa12.29□□□□□ -0.44
PTPRS-201ENST00000262963 SORCS3Q9UPU3 1222 aa12.29□□□□□ -0.44
PTPRS-201ENST00000262963 ADCY6O43306 1168 aa12.29□□□□□ -0.44
PTPRS-201ENST00000262963 ZFP1Q6P2D0 407 aa12.29□□□□□ -0.44
PTPRS-201ENST00000262963 ZCCHC23Q6ZST2 131 aa12.29□□□□□ -0.44
PTPRS-201ENST00000262963 MIER2Q8N344 545 aa12.29□□□□□ -0.44
PTPRS-201ENST00000262963 PIWIL2Q8TC59 973 aaKnown RBP12.29□□□□□ -0.44
PTPRS-201ENST00000262963 BDH2Q9BUT1 245 aa12.29□□□□□ -0.44
PTPRS-201ENST00000262963 EPS8L2Q9H6S3 715 aa12.29□□□□□ -0.44
PTPRS-201ENST00000262963 CATSPERZQ9NTU4 200 aa12.29□□□□□ -0.44
PTPRS-201ENST00000262963 KLHL28Q9NXS3 571 aa12.29□□□□□ -0.44
PTPRS-201ENST00000262963 BTBD7Q9P203 1132 aa12.29□□□□□ -0.44
PTPRS-201ENST00000262963 NOCTQ9UK39 431 aaKnown RBP12.29□□□□□ -0.44
PTPRS-201ENST00000262963 LZTS1Q9Y250 596 aa12.29□□□□□ -0.44
PTPRS-201ENST00000262963 LRP6O75581 1613 aa12.29□□□□□ -0.44
PTPRS-201ENST00000262963 KPNA3O00505 521 aaPredicted RBP12.28□□□□□ -0.44
PTPRS-201ENST00000262963 SNX3O60493 162 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 PGK1P00558 417 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 ZCCHC18P0CG32 403 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 RPA3P35244 121 aaPredicted RBP12.28□□□□□ -0.44
PTPRS-201ENST00000262963 SLC16A1P53985 500 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 ALDH6A1Q02252 535 aaKnown RBP12.28□□□□□ -0.44
PTPRS-201ENST00000262963 TRAF2Q12933 501 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 PLCL1Q15111 1095 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 DHFR2Q86XF0 187 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 ACMSDQ8TDX5 336 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 CNGB3Q9NQW8 809 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 STK39Q9UEW8 545 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 ZNF541Q9H0D2 1346 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 ZBTB14O43829 449 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 ATP6V1G2O95670 118 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 MATKP42679 507 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 PLK1P53350 603 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 UBE3AQ05086 875 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 SGCGQ13326 291 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 NOMO2Q5JPE7 1267 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 SAMD4BQ5PRF9 694 aaKnown RBP12.28□□□□□ -0.44
PTPRS-201ENST00000262963 PLEKHA7Q6IQ23 1121 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 TTC27Q6P3X3 843 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 MTSS1LQ765P7 747 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 SNX32Q86XE0 403 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 GPSM1Q86YR5 675 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 NKAPQ8N5F7 415 aaKnown RBP12.28□□□□□ -0.44
PTPRS-201ENST00000262963 POU5F2Q8N7G0 328 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 STAG3L4Q8TBR4 150 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 ZNF558Q96NG5 402 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 MAF1Q9H063 256 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 CAPN10Q9HC96 672 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 GIT1Q9Y2X7 761 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 MAP3K13O43283 966 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 SEC22BO75396 215 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 CATP04040 527 aaKnown RBP12.28□□□□□ -0.44
PTPRS-201ENST00000262963 RPN2P04844 631 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 CSH1P0DML2 217 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 CSH2P0DML3 217 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 RFX3P48380 749 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 RPL14P50914 215 aaKnown RBP12.28□□□□□ -0.44
PTPRS-201ENST00000262963 SLC34A1Q06495 639 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 MRPL28Q13084 256 aaKnown RBP12.28□□□□□ -0.44
PTPRS-201ENST00000262963 PWP1Q13610 501 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 FRG1Q14331 258 aaKnown RBP12.28□□□□□ -0.44
PTPRS-201ENST00000262963 UNC5AQ6ZN44 842 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 ZNF438Q7Z4V0 828 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 ZNF614Q8N883 585 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 USP6NLQ92738 828 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 SERAC1Q96JX3 654 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 NTPCRQ9BSD7 190 aaKnown RBP12.28□□□□□ -0.44
PTPRS-201ENST00000262963 ZYG11BQ9C0D3 744 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.28□□□□□ -0.441e-6■■■■□ 20.5
PTPRS-201ENST00000262963 OPTCQ9UBM4 332 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 CRYL1Q9Y2S2 319 aa12.28□□□□□ -0.44
PTPRS-201ENST00000262963 CLPTM1O96005 669 aa12.27□□□□□ -0.44
PTPRS-201ENST00000262963 ACADMP11310 421 aa12.27□□□□□ -0.44
PTPRS-201ENST00000262963 CCNB1P14635 433 aa12.27□□□□□ -0.44
PTPRS-201ENST00000262963 CHRNB2P17787 502 aa12.27□□□□□ -0.44
PTPRS-201ENST00000262963 ERCC2P18074 760 aa12.27□□□□□ -0.44
PTPRS-201ENST00000262963 NFKB1P19838 968 aa12.27□□□□□ -0.44
PTPRS-201ENST00000262963 PSMA3P25788 255 aa12.27□□□□□ -0.44
PTPRS-201ENST00000262963 POU1F1P28069 291 aa12.27□□□□□ -0.44
PTPRS-201ENST00000262963 FMO4P31512 558 aa12.27□□□□□ -0.44
PTPRS-201ENST00000262963 CLCN5P51795 746 aa12.27□□□□□ -0.44
PTPRS-201ENST00000262963 NAGLUP54802 743 aa12.27□□□□□ -0.44
PTPRS-201ENST00000262963 CCDC149Q6ZUS6 474 aa12.27□□□□□ -0.44
PTPRS-201ENST00000262963 USP45Q70EL2 814 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms