RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 MSANTD3Q96H12 275 aa16.12■□□□□ 0.17
CCDC90B-201ENST00000260054 RPL10LQ96L21 214 aaKnown RBP16.12■□□□□ 0.17
CCDC90B-201ENST00000260054 CARD6Q9BX69 1037 aa16.12■□□□□ 0.17
CCDC90B-201ENST00000260054 USP29Q9HBJ7 922 aa16.12■□□□□ 0.17
CCDC90B-201ENST00000260054 ELOVL2Q9NXB9 296 aa16.12■□□□□ 0.17
CCDC90B-201ENST00000260054 CA14Q9ULX7 337 aa16.12■□□□□ 0.17
CCDC90B-201ENST00000260054 ZNF148Q9UQR1 794 aa16.12■□□□□ 0.17
CCDC90B-201ENST00000260054 SHROOM3Q8TF72 1996 aa16.12■□□□□ 0.17
CCDC90B-201ENST00000260054 ITGAVP06756 1048 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 CD72P21854 359 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 FNTAP49354 379 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 STK19P49842 368 aaPredicted RBP16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 CLCN6P51797 869 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 ECT2LQ008S8 904 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 SLC10A7Q0GE19 358 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 ZBTB17Q13105 803 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 TMEM196Q5HYL7 178 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 HEATR6Q6AI08 1181 aaKnown RBP16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 FSTL4Q6MZW2 842 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 RETSATQ6NUM9 610 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 CYB5D2Q8WUJ1 264 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 FAM3CQ92520 227 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 MAML1Q92585 1016 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 CEP41Q9BYV8 373 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 ARHGEF3Q9NR81 526 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 SEPT10Q9P0V9 454 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 UBA2Q9UBT2 640 aaPredicted RBP16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 WNT16Q9UBV4 365 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 HCN2Q9UL51 889 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 DRG1Q9Y295 367 aaKnown RBP16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 KRBA1A5PL33 1030 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 ZSCAN5CA6NGD5 496 aaPredicted RBP16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 K7EQS6 105 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 K7ERQ8 282 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 KCNN4O15554 427 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 DLDP09622 509 aaKnown RBP16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 CHRNA3P32297 505 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 SULT2A1Q06520 285 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 WASHC5Q12768 1159 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 EIF4HQ15056 248 aaKnown RBP16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 PTPRNQ16849 979 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 UBALD2Q8IYN6 164 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 CEP112Q8N8E3 955 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 FAM71DQ8N9W8 422 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 USP33Q8TEY7 942 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 FATE1Q969F0 183 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 MRGPRX3Q96LB0 322 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 CCDC114Q96M63 670 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 ZNF599Q96NL3 588 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 ERVW-1Q9UQF0 538 aa16.11■□□□□ 0.17
CCDC90B-201ENST00000260054 CTAGE15A4D2H0 777 aa16.1■□□□□ 0.17
CCDC90B-201ENST00000260054 EGFP01133 1207 aa16.1■□□□□ 0.17
CCDC90B-201ENST00000260054 ATP5BP06576 529 aaKnown RBP16.1■□□□□ 0.17
CCDC90B-201ENST00000260054 CTAGE8P0CG41 777 aa16.1■□□□□ 0.17
CCDC90B-201ENST00000260054 CCNB1P14635 433 aa16.1■□□□□ 0.17
CCDC90B-201ENST00000260054 PTPN3P26045 913 aa16.1■□□□□ 0.17
CCDC90B-201ENST00000260054 SERPINH1P50454 418 aaKnown RBP16.1■□□□□ 0.17
CCDC90B-201ENST00000260054 IFI35P80217 286 aaPredicted RBP16.1■□□□□ 0.17
CCDC90B-201ENST00000260054 HNRNPDQ14103 355 aaKnown RBP16.1■□□□□ 0.17
CCDC90B-201ENST00000260054 LBRQ14739 615 aaKnown RBP16.1■□□□□ 0.17
CCDC90B-201ENST00000260054 TMCO4Q5TGY1 634 aa16.1■□□□□ 0.17
CCDC90B-201ENST00000260054 EMC10Q5UCC4 262 aa16.1■□□□□ 0.17
CCDC90B-201ENST00000260054 CTAGE6Q86UF2 777 aa16.1■□□□□ 0.17
CCDC90B-201ENST00000260054 CTAGE4Q8IX94 777 aa16.1■□□□□ 0.17
CCDC90B-201ENST00000260054 CCDC105Q8IYK2 499 aa16.1■□□□□ 0.17
CCDC90B-201ENST00000260054 LRRN4CLQ8ND94 238 aa16.1■□□□□ 0.17
CCDC90B-201ENST00000260054 MNS1Q8NEH6 495 aa16.1■□□□□ 0.17
CCDC90B-201ENST00000260054 ATL2Q8NHH9 583 aa16.1■□□□□ 0.17
CCDC90B-201ENST00000260054 MYO19Q96H55 970 aa16.1■□□□□ 0.17
CCDC90B-201ENST00000260054 KRT12Q99456 494 aa16.1■□□□□ 0.17
CCDC90B-201ENST00000260054 AMACRQ9UHK6 382 aa16.1■□□□□ 0.17
CCDC90B-201ENST00000260054 SLCO3A1Q9UIG8 710 aa16.1■□□□□ 0.17
CCDC90B-201ENST00000260054 SLC25A13Q9UJS0 675 aa16.1■□□□□ 0.17
CCDC90B-201ENST00000260054 FBXL21Q9UKT6 434 aa16.1■□□□□ 0.17
CCDC90B-201ENST00000260054 HS3ST2Q9Y278 367 aa16.1■□□□□ 0.17
CCDC90B-201ENST00000260054 FCF1Q9Y324 198 aaKnown RBP16.1■□□□□ 0.17
CCDC90B-201ENST00000260054 CXorf51AA0A1B0GTR3 108 aa16.09■□□□□ 0.17
CCDC90B-201ENST00000260054 CFAP69A5D8W1 941 aa16.09■□□□□ 0.17
CCDC90B-201ENST00000260054 SGK1O00141 431 aa16.09■□□□□ 0.17
CCDC90B-201ENST00000260054 RNF103O00237 685 aa16.09■□□□□ 0.17
CCDC90B-201ENST00000260054 MTSS1O43312 755 aa16.09■□□□□ 0.17
CCDC90B-201ENST00000260054 SMAD6O43541 496 aaKnown RBP16.09■□□□□ 0.17
CCDC90B-201ENST00000260054 TIMM44O43615 452 aa16.09■□□□□ 0.17
CCDC90B-201ENST00000260054 TMCC1O94876 653 aa16.09■□□□□ 0.17
CCDC90B-201ENST00000260054 JCHAINP01591 159 aa16.09■□□□□ 0.17
CCDC90B-201ENST00000260054 ASLP04424 464 aa16.09■□□□□ 0.17
CCDC90B-201ENST00000260054 SRCP12931 536 aa16.09■□□□□ 0.17
CCDC90B-201ENST00000260054 STIP1P31948 543 aaKnown RBP16.09■□□□□ 0.17
CCDC90B-201ENST00000260054 PRKCQQ04759 706 aa16.09■□□□□ 0.17
CCDC90B-201ENST00000260054 GRSF1Q12849 480 aaKnown RBP eCLIP16.09■□□□□ 0.17
CCDC90B-201ENST00000260054 CYTH1Q15438 398 aa16.09■□□□□ 0.17
CCDC90B-201ENST00000260054 INO80DQ53TQ3 878 aaPredicted RBP16.09■□□□□ 0.17
CCDC90B-201ENST00000260054 MARC1Q5VT66 337 aa16.09■□□□□ 0.17
CCDC90B-201ENST00000260054 NUDT18Q6ZVK8 323 aa16.09■□□□□ 0.17
CCDC90B-201ENST00000260054 PRUNE1Q86TP1 453 aa16.09■□□□□ 0.17
CCDC90B-201ENST00000260054 TEX26Q8N6G2 289 aa16.09■□□□□ 0.17
CCDC90B-201ENST00000260054 ALLCQ8N6M5 410 aa16.09■□□□□ 0.17
CCDC90B-201ENST00000260054 CNTD1Q8N815 330 aa16.09■□□□□ 0.17
CCDC90B-201ENST00000260054 ATP11CQ8NB49 1132 aa16.09■□□□□ 0.17
CCDC90B-201ENST00000260054 GLIS1Q8NBF1 620 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms