RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 TAF4O00268 1085 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 LATO43561 262 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 ENDOD1O94919 500 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 CHRNB2P17787 502 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 OR1E1P30953 314 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 PRPF39Q86UA1 669 aaKnown RBP19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 OR2A12Q8NGT7 310 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 SLC30A5Q8TAD4 765 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 C1orf74Q96LT6 269 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 SPON2Q9BUD6 331 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 TNKS2Q9H2K2 1166 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 GDF3Q9NR23 364 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 CA5BQ9Y2D0 317 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 TLR4O00206 839 aa19.47■□□□□ 0.71
TM6SF1-201ENST00000258909 CBX4O00257 560 aa19.47■□□□□ 0.71
TM6SF1-201ENST00000258909 ALOX15BO15296 676 aa19.47■□□□□ 0.71
TM6SF1-201ENST00000258909 SLC7A4O43246 635 aa19.47■□□□□ 0.71
TM6SF1-201ENST00000258909 TNFSF14O43557 240 aa19.47■□□□□ 0.71
TM6SF1-201ENST00000258909 DFNA5O60443 496 aa19.47■□□□□ 0.71
TM6SF1-201ENST00000258909 GJB6O95452 261 aa19.47■□□□□ 0.71
TM6SF1-201ENST00000258909 NXPH1P58417 271 aa19.47■□□□□ 0.71
TM6SF1-201ENST00000258909 FMO1Q01740 532 aa19.47■□□□□ 0.71
TM6SF1-201ENST00000258909 CDO1Q16878 200 aa19.47■□□□□ 0.71
TM6SF1-201ENST00000258909 C6orf118Q5T5N4 469 aa19.47■□□□□ 0.71
TM6SF1-201ENST00000258909 NAPEPLDQ6IQ20 393 aa19.47■□□□□ 0.71
TM6SF1-201ENST00000258909 CLEC17AQ6ZS10 378 aa19.47■□□□□ 0.71
TM6SF1-201ENST00000258909 BNIPLQ7Z465 357 aa19.47■□□□□ 0.71
TM6SF1-201ENST00000258909 SETD3Q86TU7 594 aaPredicted RBP19.47■□□□□ 0.71
TM6SF1-201ENST00000258909 CHST14Q8NCH0 376 aa19.47■□□□□ 0.71
TM6SF1-201ENST00000258909 CELSR3Q9NYQ7 3312 aa19.46■□□□□ 0.71
TM6SF1-201ENST00000258909 IGLV3-10A0A075B6K4 115 aa19.46■□□□□ 0.71
TM6SF1-201ENST00000258909 KPNA3O00505 521 aaPredicted RBP19.46■□□□□ 0.71
TM6SF1-201ENST00000258909 CAPNS1P04632 268 aa19.46■□□□□ 0.71
TM6SF1-201ENST00000258909 CYP1A1P04798 512 aaPredicted RBP19.46■□□□□ 0.71
TM6SF1-201ENST00000258909 ITGAVP06756 1048 aa19.46■□□□□ 0.71
TM6SF1-201ENST00000258909 CHRNA3P32297 505 aa19.46■□□□□ 0.71
TM6SF1-201ENST00000258909 SOX5P35711 763 aa19.46■□□□□ 0.71
TM6SF1-201ENST00000258909 ANP32AP39687 249 aaKnown RBP19.46■□□□□ 0.71
TM6SF1-201ENST00000258909 TAS2R38P59533 333 aa19.46■□□□□ 0.71
TM6SF1-201ENST00000258909 CDR2Q01850 454 aa19.46■□□□□ 0.71
TM6SF1-201ENST00000258909 C15orf59Q2T9L4 293 aaPredicted RBP19.46■□□□□ 0.71
TM6SF1-201ENST00000258909 TMPRSS7Q7RTY8 843 aa19.46■□□□□ 0.71
TM6SF1-201ENST00000258909 DCAF4L2Q8NA75 395 aa19.46■□□□□ 0.71
TM6SF1-201ENST00000258909 KLK6Q92876 244 aa19.46■□□□□ 0.71
TM6SF1-201ENST00000258909 ARRDC3Q96B67 414 aa19.46■□□□□ 0.71
TM6SF1-201ENST00000258909 HAPLN3Q96S86 360 aa19.46■□□□□ 0.71
TM6SF1-201ENST00000258909 C11orf70Q9BRQ4 267 aa19.46■□□□□ 0.71
TM6SF1-201ENST00000258909 KDM4CQ9H3R0 1056 aa19.46■□□□□ 0.71
TM6SF1-201ENST00000258909 FTSJ1Q9UET6 329 aa19.46■□□□□ 0.71
TM6SF1-201ENST00000258909 NBEAQ8NFP9 2946 aa19.45■□□□□ 0.7
TM6SF1-201ENST00000258909 FAM149AA5PLN7 773 aa19.45■□□□□ 0.7
TM6SF1-201ENST00000258909 DKK1O94907 266 aa19.45■□□□□ 0.7
TM6SF1-201ENST00000258909 MMP8P22894 467 aa19.45■□□□□ 0.7
TM6SF1-201ENST00000258909 JAM2P57087 298 aa19.45■□□□□ 0.7
TM6SF1-201ENST00000258909 BNIP3Q12983 259 aa19.45■□□□□ 0.7
TM6SF1-201ENST00000258909 INAVAQ3KP66 663 aa19.45■□□□□ 0.7
TM6SF1-201ENST00000258909 SLC45A4Q5BKX6 768 aa19.45■□□□□ 0.7
TM6SF1-201ENST00000258909 FKBP15Q5T1M5 1219 aa19.45■□□□□ 0.7
TM6SF1-201ENST00000258909 PIP5KL1Q5T9C9 394 aa19.45■□□□□ 0.7
TM6SF1-201ENST00000258909 ZNF677Q86XU0 584 aa19.45■□□□□ 0.7
TM6SF1-201ENST00000258909 SPATS2Q86XZ4 545 aaKnown RBP19.45■□□□□ 0.7
TM6SF1-201ENST00000258909 DRC7Q8IY82 874 aa19.45■□□□□ 0.7
TM6SF1-201ENST00000258909 JOSD2Q8TAC2 188 aa19.45■□□□□ 0.7
TM6SF1-201ENST00000258909 GRIN3AQ8TCU5 1115 aa19.45■□□□□ 0.7
TM6SF1-201ENST00000258909 SAP25Q8TEE9 199 aa19.45■□□□□ 0.7
TM6SF1-201ENST00000258909 RXFP2Q8WXD0 754 aa19.45■□□□□ 0.7
TM6SF1-201ENST00000258909 MYOCQ99972 504 aa19.45■□□□□ 0.7
TM6SF1-201ENST00000258909 MAGEB5Q9BZ81 275 aa19.45■□□□□ 0.7
TM6SF1-201ENST00000258909 ZYG11BQ9C0D3 744 aa19.45■□□□□ 0.7
TM6SF1-201ENST00000258909 ZNF212Q9UDV6 495 aa19.45■□□□□ 0.7
TM6SF1-201ENST00000258909 FARP1Q9Y4F1 1045 aaPredicted RBP19.45■□□□□ 0.7
TM6SF1-201ENST00000258909 ITPR1Q14643 2758 aa19.44■□□□□ 0.7
TM6SF1-201ENST00000258909 RNGTTO60942 597 aaKnown RBP19.44■□□□□ 0.7
TM6SF1-201ENST00000258909 TPM2P07951 284 aa19.44■□□□□ 0.7
TM6SF1-201ENST00000258909 PRLRP16471 622 aa19.44■□□□□ 0.7
TM6SF1-201ENST00000258909 SYCP1Q15431 976 aa19.44■□□□□ 0.7
TM6SF1-201ENST00000258909 CCDC14Q49A88 953 aa19.44■□□□□ 0.7
TM6SF1-201ENST00000258909 ARSIQ5FYB1 569 aa19.44■□□□□ 0.7
TM6SF1-201ENST00000258909 C22orf39Q6P5X5 142 aa19.44■□□□□ 0.7
TM6SF1-201ENST00000258909 RBM43Q6ZSC3 357 aaKnown RBP19.44■□□□□ 0.7
TM6SF1-201ENST00000258909 TRIM69Q86WT6 500 aa19.44■□□□□ 0.7
TM6SF1-201ENST00000258909 EID2Q8N6I1 236 aa19.44■□□□□ 0.7
TM6SF1-201ENST00000258909 MFSD2AQ8NA29 543 aa19.44■□□□□ 0.7
TM6SF1-201ENST00000258909 MDM1Q8TC05 714 aa19.44■□□□□ 0.7
TM6SF1-201ENST00000258909 CCDC114Q96M63 670 aa19.44■□□□□ 0.7
TM6SF1-201ENST00000258909 PCMTD1Q96MG8 357 aaPredicted RBP19.44■□□□□ 0.7
TM6SF1-201ENST00000258909 PCDHB18PQ96TA0 734 aa19.44■□□□□ 0.7
TM6SF1-201ENST00000258909 ATP13A1Q9HD20 1204 aa19.44■□□□□ 0.7
TM6SF1-201ENST00000258909 TPX2Q9ULW0 747 aaKnown RBP19.44■□□□□ 0.7
TM6SF1-201ENST00000258909 SIK3Q9Y2K2 1263 aa19.44■□□□□ 0.7
TM6SF1-201ENST00000258909 ACTL7AQ9Y615 435 aa19.44■□□□□ 0.7
TM6SF1-201ENST00000258909 ACACAQ13085 2346 aa19.44■□□□□ 0.7
TM6SF1-201ENST00000258909 APC2O95996 2303 aa19.44■□□□□ 0.7
TM6SF1-201ENST00000258909 ARID1BQ8NFD5 2236 aaPredicted RBP19.43■□□□□ 0.7
TM6SF1-201ENST00000258909 A0A1W2PQU0 124 aa19.43■□□□□ 0.7
TM6SF1-201ENST00000258909 ILVBLA1L0T0 632 aa19.43■□□□□ 0.7
TM6SF1-201ENST00000258909 SLC31A1O15431 190 aa19.43■□□□□ 0.7
TM6SF1-201ENST00000258909 EPHA8P29322 1005 aaPredicted RBP19.43■□□□□ 0.7
TM6SF1-201ENST00000258909 ARRB1P49407 418 aaPredicted RBP19.43■□□□□ 0.7
TM6SF1-201ENST00000258909 DNA2P51530 1060 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms