RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 ALFQ53S48 1182 aa28.19■■■□□ 2.1
CCM2-201ENST00000258781 TFAP2DQ7Z6R9 452 aa28.19■■■□□ 2.1
CCM2-201ENST00000258781 GPR65Q8IYL9 337 aa28.19■■■□□ 2.1
CCM2-201ENST00000258781 RXFP1Q9HBX9 757 aa28.19■■■□□ 2.1
CCM2-201ENST00000258781 ZNF212Q9UDV6 495 aa28.19■■■□□ 2.1
CCM2-201ENST00000258781 PRDM4Q9UKN5 801 aa28.19■■■□□ 2.1
CCM2-201ENST00000258781 YIPF1Q9Y548 306 aa28.19■■■□□ 2.1
CCM2-201ENST00000258781 MAGEB16A2A368 324 aa28.19■■■□□ 2.1
CCM2-201ENST00000258781 CNPP09543 421 aaKnown RBP28.19■■■□□ 2.1
CCM2-201ENST00000258781 CDH17Q12864 832 aa28.19■■■□□ 2.1
CCM2-201ENST00000258781 SLC1A5Q15758 541 aa28.19■■■□□ 2.1
CCM2-201ENST00000258781 HECTD3Q5T447 861 aa28.19■■■□□ 2.1
CCM2-201ENST00000258781 HHATQ5VTY9 493 aa28.19■■■□□ 2.1
CCM2-201ENST00000258781 RGS9BPQ6ZS82 235 aa28.19■■■□□ 2.1
CCM2-201ENST00000258781 TMC7Q7Z402 723 aa28.19■■■□□ 2.1
CCM2-201ENST00000258781 CHSY1Q86X52 802 aa28.19■■■□□ 2.1
CCM2-201ENST00000258781 TRMT2BQ96GJ1 504 aaKnown RBP28.19■■■□□ 2.1
CCM2-201ENST00000258781 APOPT1Q96IL0 206 aa28.19■■■□□ 2.1
CCM2-201ENST00000258781 IL22Q9GZX6 179 aa28.19■■■□□ 2.1
CCM2-201ENST00000258781 CYP4F11Q9HBI6 524 aa28.19■■■□□ 2.1
CCM2-201ENST00000258781 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP28.19■■■□□ 2.1
CCM2-201ENST00000258781 UGT1A9O60656 530 aa28.18■■■□□ 2.1
CCM2-201ENST00000258781 ALDH1A3P47895 512 aa28.18■■■□□ 2.1
CCM2-201ENST00000258781 GEMP55040 296 aa28.18■■■□□ 2.1
CCM2-201ENST00000258781 NADSYN1Q6IA69 706 aa28.18■■■□□ 2.1
CCM2-201ENST00000258781 TNS4Q8IZW8 715 aa28.18■■■□□ 2.1
CCM2-201ENST00000258781 ZNF419Q96HQ0 510 aaPredicted RBP28.18■■■□□ 2.1
CCM2-201ENST00000258781 RPRD1AQ96P16 312 aaPredicted RBP28.18■■■□□ 2.1
CCM2-201ENST00000258781 PAIP2Q9BPZ3 127 aaKnown RBP28.18■■■□□ 2.1
CCM2-201ENST00000258781 TCF25Q9BQ70 676 aa28.18■■■□□ 2.1
CCM2-201ENST00000258781 UGT1A7Q9HAW7 530 aa28.18■■■□□ 2.1
CCM2-201ENST00000258781 UGT1A10Q9HAW8 530 aa28.18■■■□□ 2.1
CCM2-201ENST00000258781 UGT1A8Q9HAW9 530 aa28.18■■■□□ 2.1
CCM2-201ENST00000258781 RBM22Q9NW64 420 aaKnown RBP eCLIP28.18■■■□□ 2.1
CCM2-201ENST00000258781 RPS6KL1Q9Y6S9 549 aa28.18■■■□□ 2.1
CCM2-201ENST00000258781 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.17■■■□□ 2.1
CCM2-201ENST00000258781 HLA-DQB2P05538 268 aa28.17■■■□□ 2.1
CCM2-201ENST00000258781 TACR2P21452 398 aa28.17■■■□□ 2.1
CCM2-201ENST00000258781 MAPKAPK2P49137 400 aa28.17■■■□□ 2.1
CCM2-201ENST00000258781 MGAT5Q09328 741 aa28.17■■■□□ 2.1
CCM2-201ENST00000258781 HNRNPDQ14103 355 aaKnown RBP28.17■■■□□ 2.1
CCM2-201ENST00000258781 C5orf22Q49AR2 442 aa28.17■■■□□ 2.1
CCM2-201ENST00000258781 TMEM135Q86UB9 458 aa28.17■■■□□ 2.1
CCM2-201ENST00000258781 SPPL3Q8TCT6 385 aa28.17■■■□□ 2.1
CCM2-201ENST00000258781 HMCESQ96FZ2 354 aa28.17■■■□□ 2.1
CCM2-201ENST00000258781 RETREG1Q9H6L5 497 aa28.17■■■□□ 2.1
CCM2-201ENST00000258781 TRPM5Q9NZQ8 1165 aa28.17■■■□□ 2.1
CCM2-201ENST00000258781 RWDD3Q9Y3V2 267 aa28.17■■■□□ 2.1
CCM2-201ENST00000258781 FAM237BA0A1B0GVD1 139 aa28.17■■■□□ 2.1
CCM2-201ENST00000258781 GOLGA8RI6L899 631 aa28.17■■■□□ 2.1
CCM2-201ENST00000258781 USP1O94782 785 aa28.17■■■□□ 2.1
CCM2-201ENST00000258781 TAC1P20366 129 aa28.17■■■□□ 2.1
CCM2-201ENST00000258781 FOXN2P32314 431 aa28.17■■■□□ 2.1
CCM2-201ENST00000258781 PDK4Q16654 411 aa28.17■■■□□ 2.1
CCM2-201ENST00000258781 POF1BQ8WVV4 589 aa28.17■■■□□ 2.1
CCM2-201ENST00000258781 KLF6Q99612 283 aaPredicted RBP28.17■■■□□ 2.1
CCM2-201ENST00000258781 MAFFQ9ULX9 164 aa28.17■■■□□ 2.1
CCM2-201ENST00000258781 LZTS1Q9Y250 596 aa28.17■■■□□ 2.1
CCM2-201ENST00000258781 YBX2Q9Y2T7 364 aaKnown RBP28.17■■■□□ 2.1
CCM2-201ENST00000258781 C5orf67F2Z3F1 127 aa28.16■■■□□ 2.1
CCM2-201ENST00000258781 LPXNO60711 386 aa28.16■■■□□ 2.1
CCM2-201ENST00000258781 NEBLO76041 1014 aa28.16■■■□□ 2.1
CCM2-201ENST00000258781 CXCL14O95715 111 aa28.16■■■□□ 2.1
CCM2-201ENST00000258781 PEX11BO96011 259 aa28.16■■■□□ 2.1
CCM2-201ENST00000258781 PYGBP11216 843 aa28.16■■■□□ 2.1
CCM2-201ENST00000258781 PBX2P40425 430 aa28.16■■■□□ 2.1
CCM2-201ENST00000258781 CCNFP41002 786 aa28.16■■■□□ 2.1
CCM2-201ENST00000258781 KCNQ1P51787 676 aa28.16■■■□□ 2.1
CCM2-201ENST00000258781 NEK3P51956 506 aa28.16■■■□□ 2.1
CCM2-201ENST00000258781 VEPH1Q14D04 833 aa28.16■■■□□ 2.1
CCM2-201ENST00000258781 SEPT7Q16181 437 aaKnown RBP28.16■■■□□ 2.1
CCM2-201ENST00000258781 PARP15Q460N3 678 aa28.16■■■□□ 2.1
CCM2-201ENST00000258781 LVRNQ6Q4G3 990 aa28.16■■■□□ 2.1
CCM2-201ENST00000258781 C6orf89Q6UWU4 347 aa28.16■■■□□ 2.1
CCM2-201ENST00000258781 CCDC197Q8NCU1 140 aa28.16■■■□□ 2.1
CCM2-201ENST00000258781 TCP10LQ8TDR4 215 aa28.16■■■□□ 2.1
CCM2-201ENST00000258781 PLD4Q96BZ4 506 aa28.16■■■□□ 2.1
CCM2-201ENST00000258781 GDF15Q99988 308 aa28.16■■■□□ 2.1
CCM2-201ENST00000258781 TBL1YQ9BQ87 522 aa28.16■■■□□ 2.1
CCM2-201ENST00000258781 NACA2Q9H009 215 aa28.16■■■□□ 2.1
CCM2-201ENST00000258781 MKS1Q9NXB0 559 aa28.16■■■□□ 2.1
CCM2-201ENST00000258781 UBP1Q9NZI7 540 aa28.16■■■□□ 2.1
CCM2-201ENST00000258781 FAM169AQ9Y6X4 670 aa28.16■■■□□ 2.1
CCM2-201ENST00000258781 ANAPC1Q9H1A4 1944 aa28.16■■■□□ 2.1
CCM2-201ENST00000258781 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.15■■■□□ 2.1
CCM2-201ENST00000258781 HIDE1A8MVS5 230 aa28.15■■■□□ 2.1
CCM2-201ENST00000258781 ACSL4O60488 711 aa28.15■■■□□ 2.1
CCM2-201ENST00000258781 RENBPP51606 427 aa28.15■■■□□ 2.1
CCM2-201ENST00000258781 YBEYP58557 167 aaPredicted RBP28.15■■■□□ 2.1
CCM2-201ENST00000258781 DNAJC3Q13217 504 aa28.15■■■□□ 2.1
CCM2-201ENST00000258781 TIFABQ6ZNK6 161 aa28.15■■■□□ 2.1
CCM2-201ENST00000258781 UNC5BQ8IZJ1 945 aa28.15■■■□□ 2.1
CCM2-201ENST00000258781 SPATA22Q8NHS9 363 aa28.15■■■□□ 2.1
CCM2-201ENST00000258781 CERS2Q96G23 380 aa28.15■■■□□ 2.1
CCM2-201ENST00000258781 ENTPD7Q9NQZ7 604 aa28.15■■■□□ 2.1
CCM2-201ENST00000258781 FGFR1OP2Q9NVK5 253 aa28.15■■■□□ 2.1
CCM2-201ENST00000258781 CHD5Q8TDI0 1954 aa28.15■■■□□ 2.1
CCM2-201ENST00000258781 F5H5T6 163 aa28.15■■■□□ 2.1
CCM2-201ENST00000258781 ALADP13716 330 aa28.15■■■□□ 2.1
CCM2-201ENST00000258781 PPP3CCP48454 512 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms