RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 THEGQ9P2T0 379 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 IPO11Q9UI26 975 aaKnown RBP4.82□□□□□ -1.64
USP44-201ENST00000258499 FAM95CA0A1B0GW59 222 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 OR6B1O95007 311 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 MPOP05164 745 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 FAM58BPP0C7Q3 252 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 PTPN1P18031 435 aaKnown RBP4.82□□□□□ -1.64
USP44-201ENST00000258499 XRCC1P18887 633 aaPredicted RBP4.82□□□□□ -1.64
USP44-201ENST00000258499 AOC1P19801 751 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 NMBRP28336 390 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 ADRA1BP35368 520 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 THOP1P52888 689 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 MPP1Q00013 466 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 IL1RL1Q01638 556 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 FUT11Q495W5 492 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 GK5Q6ZS86 529 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 ZBTB49Q6ZSB9 765 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 HFE2Q6ZVN8 426 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 ARHGAP22Q7Z5H3 698 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 TMEM110Q86TL2 294 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 SETD3Q86TU7 594 aaPredicted RBP4.82□□□□□ -1.64
USP44-201ENST00000258499 UNC93AQ86WB7 457 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.82□□□□□ -1.64
USP44-201ENST00000258499 CATSPER1Q8NEC5 780 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 ATP6V1E2Q96A05 226 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 CDCA5Q96FF9 252 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 CNDP1Q96KN2 507 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 HSFY1Q96LI6 401 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 TMEM79Q9BSE2 394 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 DCUN1D5Q9BTE7 237 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 PNPLA8Q9NP80 782 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 ETAA1Q9NY74 926 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 ADAMTS6Q9UKP5 1117 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 LZTS1Q9Y250 596 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 PPME1Q9Y570 386 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 SMIM28A0A1B0GU29 152 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 NR5A2O00482 541 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 CCL22O00626 93 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 ANGPT2O15123 496 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 UBDO15205 165 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 MAP3K13O43283 966 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 MTSS1O43312 755 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 APOA4P06727 396 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 HNRNPCP07910 306 aaKnown RBP eCLIP4.82□□□□□ -1.64
USP44-201ENST00000258499 BDNFP23560 247 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 PTPN3P26045 913 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 PPARGP37231 505 aaPredicted RBP4.82□□□□□ -1.64
USP44-201ENST00000258499 GRIK1P39086 918 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 PNPLA4P41247 253 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 GRM5P41594 1212 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 PTPN9P43378 593 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 LIMK2P53671 638 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 CDH13P55290 713 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 MAP3K10Q02779 954 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 STX5Q13190 355 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 FASTKQ14296 549 aaKnown RBP4.82□□□□□ -1.64
USP44-201ENST00000258499 RPS27LQ71UM5 84 aaKnown RBP4.82□□□□□ -1.64
USP44-201ENST00000258499 CXorf38Q8TB03 319 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 PBXIP1Q96AQ6 731 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 NXNL1Q96CM4 212 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 GAD1Q99259 594 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 RBBP8Q99708 897 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 GORASP1Q9BQQ3 440 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 MROH8Q9H579 483 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 SP110Q9HB58 689 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 CNTN3Q9P232 1028 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 PSMD13Q9UNM6 376 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 CRYL1Q9Y2S2 319 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 RAP2CQ9Y3L5 183 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 ZNF711Q9Y462 761 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 PCDHB12Q9Y5F1 795 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 ARFGEF1Q9Y6D6 1849 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 IGKV6D-21A0A0A0MT36 114 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 NCF1BA6NI72 391 aaPredicted RBP4.81□□□□□ -1.64
USP44-201ENST00000258499 TRPC5OSA6NMA1 111 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 YJEFN3A6XGL0 299 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 NCF1CA8MVU1 366 aaPredicted RBP4.81□□□□□ -1.64
USP44-201ENST00000258499 CAPN14A8MX76 684 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 KCNU1A8MYU2 1149 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 ZBTB14O43829 449 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 TSPAN3O60637 253 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 SRP72O76094 671 aaKnown RBP4.81□□□□□ -1.64
USP44-201ENST00000258499 ATP5BP06576 529 aaKnown RBP4.81□□□□□ -1.64
USP44-201ENST00000258499 MLNP12872 115 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 NCF1P14598 390 aaPredicted RBP4.81□□□□□ -1.64
USP44-201ENST00000258499 CD151P48509 253 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 MAPK10P53779 464 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 MAXP61244 160 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 MAPRE2Q15555 327 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 TEX44Q53QW1 395 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 LIPMQ5VYY2 423 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 STRADAQ7RTN6 431 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 LINC00523Q86TU6 105 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 LDB1Q86U70 411 aaPredicted RBP4.81□□□□□ -1.64
USP44-201ENST00000258499 FSTL5Q8N475 847 aaPredicted RBP4.81□□□□□ -1.64
USP44-201ENST00000258499 PHC3Q8NDX5 983 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 BLOC1S5Q8TDH9 187 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 LENG1Q96BZ8 264 aaPredicted RBP4.81□□□□□ -1.64
USP44-201ENST00000258499 TUBGCP3Q96CW5 907 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 SENP8Q96LD8 212 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms