RNA–Protein interactions for RNA: ENST00000256362.4

VRTN-201, Transcript of vertebrae development associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRTN, Length 3,466 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-201ENST00000256362 WDR70Q9NW82 654 aa11.86□□□□□ -0.51
VRTN-201ENST00000256362 SFMBT1Q9UHJ3 866 aa11.86□□□□□ -0.51
VRTN-201ENST00000256362 AP4S1Q9Y587 144 aa11.86□□□□□ -0.51
VRTN-201ENST00000256362 TMEM233B4DJY2 109 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 GLRA3O75311 464 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 TEX44Q53QW1 395 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 PACS1Q6VY07 963 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 CCDC185Q8N715 623 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 CATSPER1Q8NEC5 780 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 BPIFB6Q8NFQ5 453 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 C12orf43Q96C57 262 aaKnown RBP11.85□□□□□ -0.51
VRTN-201ENST00000256362 MCRS1Q96EZ8 462 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 BTBD9Q96Q07 612 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 MRPL45Q9BRJ2 306 aaKnown RBP11.85□□□□□ -0.51
VRTN-201ENST00000256362 ZBTB7AO95365 584 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 PARNO95453 639 aaKnown RBP11.85□□□□□ -0.51
VRTN-201ENST00000256362 AOC1P19801 751 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 HMOX2P30519 316 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 ARRB2P32121 409 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 GRIA3P42263 894 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 AP3M2P53677 418 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 KIF19Q2TAC6 998 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 DCAF6Q58WW2 860 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 FAM47CQ5HY64 1035 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 FAM219BQ5XKK7 198 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 RNF19BQ6ZMZ0 732 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 LILRA2Q8N149 483 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 RYBPQ8N488 228 aaPredicted RBP11.85□□□□□ -0.51
VRTN-201ENST00000256362 RPL10LQ96L21 214 aaKnown RBP11.85□□□□□ -0.51
VRTN-201ENST00000256362 SIGLEC10Q96LC7 697 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 EBNA1BP2Q99848 306 aaKnown RBP11.85□□□□□ -0.51
VRTN-201ENST00000256362 ING2Q9H160 280 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 LHX5Q9H2C1 402 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 C6orf203Q9P0P8 240 aaPredicted RBP11.85□□□□□ -0.51
VRTN-201ENST00000256362 TUBGCP4Q9UGJ1 667 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 CDY2AQ9Y6F7 541 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 CDY1Q9Y6F8 540 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 COL11A1P12107 1806 aaPredicted RBP11.85□□□□□ -0.51
VRTN-201ENST00000256362 KCNU1A8MYU2 1149 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 PLOD2O00469 737 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 ACKR2O00590 384 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 CCNT2O60583 730 aaKnown RBP11.85□□□□□ -0.51
VRTN-201ENST00000256362 ALDOAP04075 364 aaKnown RBP11.85□□□□□ -0.51
VRTN-201ENST00000256362 ZNF182P17025 639 aaPredicted RBP11.85□□□□□ -0.51
VRTN-201ENST00000256362 GARSP41250 739 aaKnown RBP11.85□□□□□ -0.51
VRTN-201ENST00000256362 IRF9Q00978 393 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 SLC12A1Q13621 1099 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 SPIDRQ14159 915 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 TMEM132DQ14C87 1099 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 AGKQ53H12 422 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 GALNT18Q6P9A2 607 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 DEFB132Q7Z7B7 95 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 TTC30AQ86WT1 665 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 KIAA2013Q8IYS2 634 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 COX4I2Q96KJ9 171 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 CCDC138Q96M89 665 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 DGCR6LQ9BY27 220 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 DRC3Q9H069 523 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 HOXC10Q9NYD6 342 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 SIRPGQ9P1W8 387 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 ITGA11Q9UKX5 1188 aa11.85□□□□□ -0.51
VRTN-201ENST00000256362 AP3B1O00203 1094 aa11.84□□□□□ -0.51
VRTN-201ENST00000256362 PAPSS1O43252 624 aaPredicted RBP11.84□□□□□ -0.51
VRTN-201ENST00000256362 VAPBO95292 243 aa11.84□□□□□ -0.51
VRTN-201ENST00000256362 C1QAP02745 245 aa11.84□□□□□ -0.51
VRTN-201ENST00000256362 PITX1P78337 314 aaPredicted RBP11.84□□□□□ -0.51
VRTN-201ENST00000256362 CEACAM7Q14002 265 aa11.84□□□□□ -0.51
VRTN-201ENST00000256362 MXD4Q14582 209 aaPredicted RBP11.84□□□□□ -0.51
VRTN-201ENST00000256362 DCAF15Q66K64 600 aa11.84□□□□□ -0.51
VRTN-201ENST00000256362 SEL1L3Q68CR1 1132 aa11.84□□□□□ -0.51
VRTN-201ENST00000256362 RPS27LQ71UM5 84 aaKnown RBP11.84□□□□□ -0.51
VRTN-201ENST00000256362 ZNF534Q76KX8 674 aa11.84□□□□□ -0.51
VRTN-201ENST00000256362 STRA8Q7Z7C7 330 aa11.84□□□□□ -0.51
VRTN-201ENST00000256362 EFHD1Q9BUP0 239 aa11.84□□□□□ -0.51
VRTN-201ENST00000256362 NAA50Q9GZZ1 169 aaKnown RBP11.84□□□□□ -0.51
VRTN-201ENST00000256362 ILKAPQ9H0C8 392 aaPredicted RBP11.84□□□□□ -0.51
VRTN-201ENST00000256362 TRPC7Q9HCX4 862 aa11.84□□□□□ -0.51
VRTN-201ENST00000256362 GID8Q9NWU2 228 aa11.84□□□□□ -0.51
VRTN-201ENST00000256362 GGA3Q9NZ52 723 aa11.84□□□□□ -0.51
VRTN-201ENST00000256362 FETUBQ9UGM5 382 aa11.84□□□□□ -0.51
VRTN-201ENST00000256362 CIDEBQ9UHD4 219 aa11.84□□□□□ -0.51
VRTN-201ENST00000256362 EFR3BQ9Y2G0 817 aa11.84□□□□□ -0.51
VRTN-201ENST00000256362 ST14Q9Y5Y6 855 aa11.84□□□□□ -0.51
VRTN-201ENST00000256362 PLIN3O60664 434 aa11.84□□□□□ -0.51
VRTN-201ENST00000256362 ZNF286BP0CG31 522 aa11.84□□□□□ -0.51
VRTN-201ENST00000256362 HOXD12P35452 270 aa11.84□□□□□ -0.51
VRTN-201ENST00000256362 MCCD1P59942 119 aaPredicted RBP11.84□□□□□ -0.51
VRTN-201ENST00000256362 CYP2A13Q16696 494 aa11.84□□□□□ -0.51
VRTN-201ENST00000256362 SLC10A6Q3KNW5 377 aa11.84□□□□□ -0.51
VRTN-201ENST00000256362 FGD3Q5JSP0 725 aa11.84□□□□□ -0.51
VRTN-201ENST00000256362 PID1Q7Z2X4 250 aa11.84□□□□□ -0.51
VRTN-201ENST00000256362 SETD3Q86TU7 594 aaPredicted RBP11.84□□□□□ -0.51
VRTN-201ENST00000256362 SIX6OS1Q8N1H7 587 aa11.84□□□□□ -0.51
VRTN-201ENST00000256362 COLGALT1Q8NBJ5 622 aa11.84□□□□□ -0.51
VRTN-201ENST00000256362 FNIP1Q8TF40 1166 aa11.84□□□□□ -0.51
VRTN-201ENST00000256362 NT5C1AQ9BXI3 368 aa11.84□□□□□ -0.51
VRTN-201ENST00000256362 UPF3AQ9H1J1 476 aaKnown RBP11.84□□□□□ -0.51
VRTN-201ENST00000256362 SNX25Q9H3E2 840 aa11.84□□□□□ -0.51
VRTN-201ENST00000256362 EFCAB1Q9HAE3 211 aa11.84□□□□□ -0.51
VRTN-201ENST00000256362 GMPR2Q9P2T1 348 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms