RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 LRRC34Q8IZ02 419 aa19.27■□□□□ 0.68
TRIM47-201ENST00000254816 MAB21L3Q8N8X9 362 aa19.27■□□□□ 0.68
TRIM47-201ENST00000254816 EBNA1BP2Q99848 306 aaKnown RBP19.27■□□□□ 0.68
TRIM47-201ENST00000254816 CORO1BQ9BR76 489 aa19.27■□□□□ 0.68
TRIM47-201ENST00000254816 MTIF3Q9H2K0 278 aaKnown RBP19.27■□□□□ 0.68
TRIM47-201ENST00000254816 HCFC1R1Q9NWW0 138 aa19.27■□□□□ 0.68
TRIM47-201ENST00000254816 LGALS13Q9UHV8 139 aa19.27■□□□□ 0.68
TRIM47-201ENST00000254816 GGA2Q9UJY4 613 aa19.27■□□□□ 0.68
TRIM47-201ENST00000254816 ASB3Q9Y575 518 aa19.27■□□□□ 0.68
TRIM47-201ENST00000254816 CAPN7Q9Y6W3 813 aa19.27■□□□□ 0.68
TRIM47-201ENST00000254816 MYLKQ15746 1914 aa19.27■□□□□ 0.67
TRIM47-201ENST00000254816 PEX11BO96011 259 aa19.26■□□□□ 0.67
TRIM47-201ENST00000254816 CAMK1Q14012 370 aa19.26■□□□□ 0.67
TRIM47-201ENST00000254816 SPRED3Q2MJR0 410 aa19.26■□□□□ 0.67
TRIM47-201ENST00000254816 ACBD5Q5T8D3 534 aaPredicted RBP19.26■□□□□ 0.67
TRIM47-201ENST00000254816 CASC4Q6P4E1 433 aa19.26■□□□□ 0.67
TRIM47-201ENST00000254816 UNC5AQ6ZN44 842 aa19.26■□□□□ 0.67
TRIM47-201ENST00000254816 OR52K2Q8NGK3 314 aa19.26■□□□□ 0.67
TRIM47-201ENST00000254816 PABPC5Q96DU9 382 aaKnown RBP19.26■□□□□ 0.67
TRIM47-201ENST00000254816 HTATIP2Q9BUP3 242 aa19.26■□□□□ 0.67
TRIM47-201ENST00000254816 SP110Q9HB58 689 aa19.26■□□□□ 0.67
TRIM47-201ENST00000254816 MLXIPLQ9NP71 852 aa19.26■□□□□ 0.67
TRIM47-201ENST00000254816 SYBUQ9NX95 663 aa19.26■□□□□ 0.67
TRIM47-201ENST00000254816 CPQQ9Y646 472 aa19.26■□□□□ 0.67
TRIM47-201ENST00000254816 A0A1W2PRU2 124 aa19.26■□□□□ 0.67
TRIM47-201ENST00000254816 RFPL2O75678 378 aa19.26■□□□□ 0.67
TRIM47-201ENST00000254816 MYL4P12829 197 aa19.26■□□□□ 0.67
TRIM47-201ENST00000254816 MLNP12872 115 aa19.26■□□□□ 0.67
TRIM47-201ENST00000254816 TSHRP16473 764 aa19.26■□□□□ 0.67
TRIM47-201ENST00000254816 CLCN4P51793 760 aa19.26■□□□□ 0.67
TRIM47-201ENST00000254816 GEMIN4P57678 1058 aaKnown RBP19.26■□□□□ 0.67
TRIM47-201ENST00000254816 MTA1Q13330 715 aa19.26■□□□□ 0.67
TRIM47-201ENST00000254816 KBTBD12Q3ZCT8 623 aa19.26■□□□□ 0.67
TRIM47-201ENST00000254816 C5orf22Q49AR2 442 aa19.26■□□□□ 0.67
TRIM47-201ENST00000254816 PABPC1LQ4VXU2 614 aaKnown RBP19.26■□□□□ 0.67
TRIM47-201ENST00000254816 FBXW10Q5XX13 1052 aa19.26■□□□□ 0.67
TRIM47-201ENST00000254816 ADAMTS19Q8TE59 1207 aa19.26■□□□□ 0.67
TRIM47-201ENST00000254816 LRRC39Q96DD0 335 aa19.26■□□□□ 0.67
TRIM47-201ENST00000254816 PAFAH2Q99487 392 aa19.26■□□□□ 0.67
TRIM47-201ENST00000254816 ATXN3LQ9H3M9 355 aa19.26■□□□□ 0.67
TRIM47-201ENST00000254816 GLOD4Q9HC38 313 aa19.26■□□□□ 0.67
TRIM47-201ENST00000254816 A0A0D9SEW6 157 aa19.25■□□□□ 0.67
TRIM47-201ENST00000254816 CA3P07451 260 aa19.25■□□□□ 0.67
TRIM47-201ENST00000254816 SLC10A7Q0GE19 358 aa19.25■□□□□ 0.67
TRIM47-201ENST00000254816 CCDC121Q6ZUS5 278 aa19.25■□□□□ 0.67
TRIM47-201ENST00000254816 ARNTL2Q8WYA1 636 aa19.25■□□□□ 0.67
TRIM47-201ENST00000254816 DONSONQ9NYP3 566 aa19.25■□□□□ 0.67
TRIM47-201ENST00000254816 TMEM120BA0PK00 339 aa19.25■□□□□ 0.67
TRIM47-201ENST00000254816 SDR42E2A6NKP2 422 aa19.25■□□□□ 0.67
TRIM47-201ENST00000254816 NEBLO76041 1014 aa19.25■□□□□ 0.67
TRIM47-201ENST00000254816 SUN1O94901 812 aa19.25■□□□□ 0.67
TRIM47-201ENST00000254816 MAPKAPK2P49137 400 aa19.25■□□□□ 0.67
TRIM47-201ENST00000254816 MAXP61244 160 aa19.25■□□□□ 0.67
TRIM47-201ENST00000254816 PRPSAP1Q14558 356 aa19.25■□□□□ 0.67
TRIM47-201ENST00000254816 KLHL38Q2WGJ6 581 aa19.25■□□□□ 0.67
TRIM47-201ENST00000254816 PPM1LQ5SGD2 360 aa19.25■□□□□ 0.67
TRIM47-201ENST00000254816 ADGRF1Q5T601 910 aa19.25■□□□□ 0.67
TRIM47-201ENST00000254816 LRRC49Q8IUZ0 686 aa19.25■□□□□ 0.67
TRIM47-201ENST00000254816 ANKRD42Q8N9B4 389 aa19.25■□□□□ 0.67
TRIM47-201ENST00000254816 MAML1Q92585 1016 aa19.25■□□□□ 0.67
TRIM47-201ENST00000254816 STAMBPL1Q96FJ0 436 aa19.25■□□□□ 0.67
TRIM47-201ENST00000254816 RANBP2P49792 3224 aaKnown RBP19.24■□□□□ 0.67
TRIM47-201ENST00000254816 CACNG3O60359 315 aa19.24■□□□□ 0.67
TRIM47-201ENST00000254816 VIMP08670 466 aaKnown RBP19.24■□□□□ 0.67
TRIM47-201ENST00000254816 ANO4Q32M45 955 aa19.24■□□□□ 0.67
TRIM47-201ENST00000254816 RABGAP1LQ5R372 815 aa19.24■□□□□ 0.67
TRIM47-201ENST00000254816 TRMT10BQ6PF06 316 aaKnown RBP19.24■□□□□ 0.67
TRIM47-201ENST00000254816 TDRPQ86YL5 185 aa19.24■□□□□ 0.67
TRIM47-201ENST00000254816 SRRM1Q8IYB3 904 aaKnown RBP19.24■□□□□ 0.67
TRIM47-201ENST00000254816 UNC5BQ8IZJ1 945 aa19.24■□□□□ 0.67
TRIM47-201ENST00000254816 ELMOD1Q8N336 334 aa19.24■□□□□ 0.67
TRIM47-201ENST00000254816 DNAAF3Q8N9W5 541 aa19.24■□□□□ 0.67
TRIM47-201ENST00000254816 OR7D4Q8NG98 312 aa19.24■□□□□ 0.67
TRIM47-201ENST00000254816 MRPS31Q92665 395 aaKnown RBP19.24■□□□□ 0.67
TRIM47-201ENST00000254816 AZIN2Q96A70 460 aa19.24■□□□□ 0.67
TRIM47-201ENST00000254816 NT5MQ9NPB1 228 aa19.24■□□□□ 0.67
TRIM47-201ENST00000254816 KCNK9Q9NPC2 374 aa19.24■□□□□ 0.67
TRIM47-201ENST00000254816 SLC24A2Q9UI40 661 aa19.24■□□□□ 0.67
TRIM47-201ENST00000254816 PCDHA11Q9Y5I1 949 aa19.24■□□□□ 0.67
TRIM47-201ENST00000254816 HELZP42694 1942 aaKnown RBP19.24■□□□□ 0.67
TRIM47-201ENST00000254816 TTC24A2A3L6 582 aaPredicted RBP19.23■□□□□ 0.67
TRIM47-201ENST00000254816 CXorf49A8MYA2 514 aaPredicted RBP19.23■□□□□ 0.67
TRIM47-201ENST00000254816 H3BNC9 293 aa19.23■□□□□ 0.67
TRIM47-201ENST00000254816 OLFM2O95897 454 aa19.23■□□□□ 0.67
TRIM47-201ENST00000254816 C1QAP02745 245 aa19.23■□□□□ 0.67
TRIM47-201ENST00000254816 ETFBP38117 255 aa19.23■□□□□ 0.67
TRIM47-201ENST00000254816 CCR2P41597 374 aa19.23■□□□□ 0.67
TRIM47-201ENST00000254816 SERINC3Q13530 473 aa19.23■□□□□ 0.67
TRIM47-201ENST00000254816 SMAD1Q15797 465 aaKnown RBP19.23■□□□□ 0.67
TRIM47-201ENST00000254816 PARP15Q460N3 678 aa19.23■□□□□ 0.67
TRIM47-201ENST00000254816 CES3Q6UWW8 571 aa19.23■□□□□ 0.67
TRIM47-201ENST00000254816 TAX1BP1Q86VP1 789 aa19.23■□□□□ 0.67
TRIM47-201ENST00000254816 RIBC1Q8N443 379 aaPredicted RBP19.23■□□□□ 0.67
TRIM47-201ENST00000254816 FCRL5Q96RD9 977 aa19.23■□□□□ 0.67
TRIM47-201ENST00000254816 CYTH2Q99418 400 aa19.23■□□□□ 0.67
TRIM47-201ENST00000254816 CASS4Q9NQ75 786 aa19.23■□□□□ 0.67
TRIM47-201ENST00000254816 MAN1C1Q9NR34 630 aa19.23■□□□□ 0.67
TRIM47-201ENST00000254816 SMYD2Q9NRG4 433 aa19.23■□□□□ 0.67
TRIM47-201ENST00000254816 PSMC3IPQ9P2W1 217 aaPredicted RBP19.23■□□□□ 0.67
TRIM47-201ENST00000254816 RWDD3Q9Y3V2 267 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms