RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 CUL2Q13617 745 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 ERI1Q8IV48 349 aaKnown RBP13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 GANCQ8TET4 914 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 NACC2Q96BF6 587 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 TPD52L3Q96J77 140 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 CRISPLD1Q9H336 500 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 DNAJC18Q9H819 358 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 NUP50Q9UKX7 468 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 HDAC3O15379 428 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 FDX1P10109 184 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 MZF1P28698 734 aaPredicted RBP13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 KPNA1P52294 538 aaPredicted RBP13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 PPIL2Q13356 520 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 SQLEQ14534 574 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 LDLRAP1Q5SW96 308 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 NT5DC1Q5TFE4 455 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 KLHL24Q6TFL4 600 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 MYO1HQ8N1T3 1032 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 PNPT1Q8TCS8 783 aaKnown RBP13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 RAB2BQ8WUD1 216 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 PI4K2AQ9BTU6 479 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 GPR63Q9BZJ6 419 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 AKAP7Q9P0M2 348 aaPredicted RBP13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 NCF1BA6NI72 391 aaPredicted RBP13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 NCF1CA8MVU1 366 aaPredicted RBP13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 KPNA5O15131 536 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 PGK1P00558 417 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 PRKCBP05771 671 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 NCF1P14598 390 aaPredicted RBP13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 TSHRP16473 764 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 IFNGR2P38484 337 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 GSTM5P46439 218 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 BAATQ14032 418 aaPredicted RBP13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 FGD3Q5JSP0 725 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 FITM2Q8N6M3 262 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 CCDC185Q8N715 623 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 PRMT6Q96LA8 375 aaPredicted RBP13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 CHCHD6Q9BRQ6 235 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 ELP3Q9H9T3 547 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 MID1IP1Q9NPA3 183 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 AASDHPPTQ9NRN7 309 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 GGA3Q9NZ52 723 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 SNX7Q9UNH6 387 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 PEX16Q9Y5Y5 336 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 M0QX08 132 aa13.33□□□□□ -0.27
PCDHGA3-201ENST00000253812 ZMPSTE24O75844 475 aa13.33□□□□□ -0.27
PCDHGA3-201ENST00000253812 HOXB6P17509 224 aaKnown RBP13.33□□□□□ -0.27
PCDHGA3-201ENST00000253812 LBPP18428 481 aa13.33□□□□□ -0.27
PCDHGA3-201ENST00000253812 MUTP22033 750 aa13.33□□□□□ -0.27
PCDHGA3-201ENST00000253812 PLA2G4FQ68DD2 849 aa13.33□□□□□ -0.27
PCDHGA3-201ENST00000253812 FASTKD5Q7L8L6 764 aaKnown RBP13.33□□□□□ -0.27
PCDHGA3-201ENST00000253812 NXNL1Q96CM4 212 aa13.33□□□□□ -0.27
PCDHGA3-201ENST00000253812 VPS4AQ9UN37 437 aa13.33□□□□□ -0.27
PCDHGA3-201ENST00000253812 PCDHB8Q9UN66 801 aa13.33□□□□□ -0.27
PCDHGA3-201ENST00000253812 IRAK3Q9Y616 596 aa13.33□□□□□ -0.27
PCDHGA3-201ENST00000253812 ZMYM2Q9UBW7 1377 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 RBM47A0AV96 593 aaKnown RBP13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 NPM3O75607 178 aaKnown RBP13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 ACVR2BQ13705 512 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 TBC1D21Q8IYX1 336 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 CCDC115Q96NT0 180 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 ACTR8Q9H981 624 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 CHMP1AQ9HD42 196 aaPredicted RBP13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 OGDHLQ9ULD0 1010 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 VANGL2Q9ULK5 521 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 GABBR2O75899 941 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 UPP2O95045 317 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 MAGEA2P43356 314 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 USF2Q15853 346 aaPredicted RBP13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 OLFML2AQ68BL7 652 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 DNAJC14Q6Y2X3 702 aaPredicted RBP13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 CCDC28AQ8IWP9 274 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 OFCC1Q8IZS5 231 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 HAVCR1Q96D42 359 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 DNAJC1Q96KC8 554 aaKnown RBP13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 MBOAT7Q96N66 472 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 MYOZ2Q9NPC6 264 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 GNPTGQ9UJJ9 305 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 DGKBQ9Y6T7 804 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 ERI2A8K979 691 aaKnown RBP13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 PSMD11O00231 422 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 PGRMC2O15173 223 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 KPNA6O60684 536 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 MAP3K6O95382 1288 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 ERCC2P18074 760 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 PGAM1P18669 254 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 POU5F1Q01860 360 aaKnown RBP13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 CLHC1Q8NHS4 586 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 SLC7A14Q8TBB6 771 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 BAP1Q92560 729 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 RCN3Q96D15 328 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 RNF38Q9H0F5 515 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 DEFB129Q9H1M3 183 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 GPN1Q9HCN4 374 aaPredicted RBP13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 ITGA11Q9UKX5 1188 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 PLA2G4CQ9UP65 541 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 TBC1D30Q9Y2I9 924 aa13.33□□□□□ -0.28
PCDHGA3-201ENST00000253812 CYP1A1P04798 512 aaPredicted RBP13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 NR2F6P10588 404 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 SLC9A3P48764 834 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms