RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 FZD10Q9ULW2 581 aa19.29■□□□□ 0.68
SNX4-201ENST00000251775 PCDHB12Q9Y5F1 795 aa19.29■□□□□ 0.68
SNX4-201ENST00000251775 A0A1B0GTW7 788 aa19.28■□□□□ 0.68
SNX4-201ENST00000251775 MATKP42679 507 aa19.28■□□□□ 0.68
SNX4-201ENST00000251775 NUMBP49757 651 aa19.28■□□□□ 0.68
SNX4-201ENST00000251775 TAF6P49848 677 aa19.28■□□□□ 0.68
SNX4-201ENST00000251775 SERPINB8P50452 374 aa19.28■□□□□ 0.68
SNX4-201ENST00000251775 ZNF423Q2M1K9 1284 aa19.28■□□□□ 0.68
SNX4-201ENST00000251775 XKR4Q5GH76 650 aa19.28■□□□□ 0.68
SNX4-201ENST00000251775 ZFP1Q6P2D0 407 aa19.28■□□□□ 0.68
SNX4-201ENST00000251775 AMIGO2Q86SJ2 522 aa19.28■□□□□ 0.68
SNX4-201ENST00000251775 ABTB1Q969K4 478 aaPredicted RBP19.28■□□□□ 0.68
SNX4-201ENST00000251775 PHF12Q96QT6 1004 aa19.28■□□□□ 0.68
SNX4-201ENST00000251775 OR52B2Q96RD2 323 aa19.28■□□□□ 0.68
SNX4-201ENST00000251775 LGMNQ99538 433 aa19.28■□□□□ 0.68
SNX4-201ENST00000251775 SLC2A11Q9BYW1 496 aa19.28■□□□□ 0.68
SNX4-201ENST00000251775 CDH19Q9H159 772 aa19.28■□□□□ 0.68
SNX4-201ENST00000251775 SUDS3Q9H7L9 328 aaPredicted RBP19.28■□□□□ 0.68
SNX4-201ENST00000251775 SPON1Q9HCB6 807 aa19.28■□□□□ 0.68
SNX4-201ENST00000251775 ZNF358Q9NW07 568 aa19.28■□□□□ 0.68
SNX4-201ENST00000251775 CAPNS1P04632 268 aa19.28■□□□□ 0.68
SNX4-201ENST00000251775 GLDCP23378 1020 aa19.28■□□□□ 0.68
SNX4-201ENST00000251775 TPP2P29144 1249 aaPredicted RBP19.28■□□□□ 0.68
SNX4-201ENST00000251775 MSX2P35548 267 aaPredicted RBP19.28■□□□□ 0.68
SNX4-201ENST00000251775 SERPINB5P36952 375 aa19.28■□□□□ 0.68
SNX4-201ENST00000251775 SULT1E1P49888 294 aa19.28■□□□□ 0.68
SNX4-201ENST00000251775 CRADDP78560 199 aa19.28■□□□□ 0.68
SNX4-201ENST00000251775 ADIGQ0VDE8 80 aa19.28■□□□□ 0.68
SNX4-201ENST00000251775 INSCQ1MX18 579 aa19.28■□□□□ 0.68
SNX4-201ENST00000251775 OTUD1Q5VV17 481 aaPredicted RBP19.28■□□□□ 0.68
SNX4-201ENST00000251775 ARRDC4Q8NCT1 418 aa19.28■□□□□ 0.68
SNX4-201ENST00000251775 HTR3CQ8WXA8 447 aa19.28■□□□□ 0.68
SNX4-201ENST00000251775 SERPINI1Q99574 410 aa19.28■□□□□ 0.68
SNX4-201ENST00000251775 PKP2Q99959 881 aa19.28■□□□□ 0.68
SNX4-201ENST00000251775 CLDN5O00501 218 aa19.27■□□□□ 0.68
SNX4-201ENST00000251775 KCNE1P15382 129 aa19.27■□□□□ 0.68
SNX4-201ENST00000251775 ADAM17P78536 824 aa19.27■□□□□ 0.68
SNX4-201ENST00000251775 TMED1Q13445 227 aa19.27■□□□□ 0.68
SNX4-201ENST00000251775 PCBP1Q15365 356 aaKnown RBP eCLIP19.27■□□□□ 0.68
SNX4-201ENST00000251775 PIGGQ5H8A4 983 aa19.27■□□□□ 0.68
SNX4-201ENST00000251775 PPM1LQ5SGD2 360 aa19.27■□□□□ 0.68
SNX4-201ENST00000251775 DSELQ8IZU8 1212 aa19.27■□□□□ 0.68
SNX4-201ENST00000251775 NUP93Q8N1F7 819 aa19.27■□□□□ 0.68
SNX4-201ENST00000251775 GALNT4Q8N4A0 578 aa19.27■□□□□ 0.68
SNX4-201ENST00000251775 FAM149B1Q96BN6 582 aa19.27■□□□□ 0.68
SNX4-201ENST00000251775 CDRT15Q96T59 188 aa19.27■□□□□ 0.68
SNX4-201ENST00000251775 PADI4Q9UM07 663 aa19.27■□□□□ 0.68
SNX4-201ENST00000251775 CDY2AQ9Y6F7 541 aa19.27■□□□□ 0.68
SNX4-201ENST00000251775 CDY1Q9Y6F8 540 aa19.27■□□□□ 0.68
SNX4-201ENST00000251775 E2F8A0AVK6 867 aa19.27■□□□□ 0.68
SNX4-201ENST00000251775 XPO1O14980 1071 aaKnown RBP19.27■□□□□ 0.68
SNX4-201ENST00000251775 MAGEB3O15480 346 aa19.27■□□□□ 0.68
SNX4-201ENST00000251775 TREHO43280 583 aa19.27■□□□□ 0.68
SNX4-201ENST00000251775 MFSD11O43934 449 aa19.27■□□□□ 0.68
SNX4-201ENST00000251775 BEST1O76090 585 aa19.27■□□□□ 0.68
SNX4-201ENST00000251775 TOMM70O94826 608 aa19.27■□□□□ 0.68
SNX4-201ENST00000251775 AXLP30530 894 aa19.27■□□□□ 0.68
SNX4-201ENST00000251775 ARL4AP40617 200 aa19.27■□□□□ 0.68
SNX4-201ENST00000251775 MS4A2Q01362 244 aa19.27■□□□□ 0.68
SNX4-201ENST00000251775 MFSD10Q14728 455 aa19.27■□□□□ 0.68
SNX4-201ENST00000251775 SLC25A52Q3SY17 297 aa19.27■□□□□ 0.68
SNX4-201ENST00000251775 NAPRTQ6XQN6 538 aa19.27■□□□□ 0.68
SNX4-201ENST00000251775 AK5Q9Y6K8 562 aa19.27■□□□□ 0.68
SNX4-201ENST00000251775 COQ9O75208 318 aa19.26■□□□□ 0.67
SNX4-201ENST00000251775 CPA3P15088 417 aa19.26■□□□□ 0.67
SNX4-201ENST00000251775 IGFBP6P24592 240 aaPredicted RBP19.26■□□□□ 0.67
SNX4-201ENST00000251775 PIK3R1P27986 724 aa19.26■□□□□ 0.67
SNX4-201ENST00000251775 PNPLA4P41247 253 aa19.26■□□□□ 0.67
SNX4-201ENST00000251775 PPIDQ08752 370 aaKnown RBP19.26■□□□□ 0.67
SNX4-201ENST00000251775 SMAD1Q15797 465 aaKnown RBP19.26■□□□□ 0.67
SNX4-201ENST00000251775 DCAF6Q58WW2 860 aa19.26■□□□□ 0.67
SNX4-201ENST00000251775 METTL21CQ5VZV1 264 aa19.26■□□□□ 0.67
SNX4-201ENST00000251775 C16orf89Q6UX73 402 aa19.26■□□□□ 0.67
SNX4-201ENST00000251775 SNX32Q86XE0 403 aa19.26■□□□□ 0.67
SNX4-201ENST00000251775 KYQ8NBH2 561 aa19.26■□□□□ 0.67
SNX4-201ENST00000251775 B3GALNT2Q8NCR0 500 aa19.26■□□□□ 0.67
SNX4-201ENST00000251775 PCNTO95613 3336 aa19.26■□□□□ 0.67
SNX4-201ENST00000251775 A0A0A0MRY4 1105 aa19.26■□□□□ 0.67
SNX4-201ENST00000251775 PRSS51A0A1B0GVH4 220 aa19.26■□□□□ 0.67
SNX4-201ENST00000251775 HUS1O60921 280 aa19.26■□□□□ 0.67
SNX4-201ENST00000251775 TRPA1O75762 1119 aa19.26■□□□□ 0.67
SNX4-201ENST00000251775 THRAP10827 490 aa19.26■□□□□ 0.67
SNX4-201ENST00000251775 NDUFV1P49821 464 aa19.26■□□□□ 0.67
SNX4-201ENST00000251775 LILRA4P59901 499 aa19.26■□□□□ 0.67
SNX4-201ENST00000251775 SV2CQ496J9 727 aa19.26■□□□□ 0.67
SNX4-201ENST00000251775 CASC4Q6P4E1 433 aa19.26■□□□□ 0.67
SNX4-201ENST00000251775 BNC2Q6ZN30 1099 aaPredicted RBP19.26■□□□□ 0.67
SNX4-201ENST00000251775 CDKL2Q92772 493 aa19.26■□□□□ 0.67
SNX4-201ENST00000251775 SPATA13Q96N96 652 aa19.26■□□□□ 0.67
SNX4-201ENST00000251775 PTPN18Q99952 460 aa19.26■□□□□ 0.67
SNX4-201ENST00000251775 THEGQ9P2T0 379 aa19.26■□□□□ 0.67
SNX4-201ENST00000251775 SYNJ2BP-COX16A0A087WUM0 186 aa19.25■□□□□ 0.67
SNX4-201ENST00000251775 ATP6V1G1O75348 118 aa19.25■□□□□ 0.67
SNX4-201ENST00000251775 HSPA4LO95757 839 aa19.25■□□□□ 0.67
SNX4-201ENST00000251775 MX2P20592 715 aa19.25■□□□□ 0.67
SNX4-201ENST00000251775 HSPA13P48723 471 aa19.25■□□□□ 0.67
SNX4-201ENST00000251775 PDK1Q15118 436 aa19.25■□□□□ 0.67
SNX4-201ENST00000251775 PAQR9Q6ZVX9 377 aa19.25■□□□□ 0.67
SNX4-201ENST00000251775 TNS4Q8IZW8 715 aa19.25■□□□□ 0.67
SNX4-201ENST00000251775 SMG8Q8ND04 991 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms