RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 MAB21L3Q8N8X9 362 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 DCAKDQ8WVC6 231 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 DACH2Q96NX9 599 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 POPDC2Q9HBU9 364 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 SLC7A8Q9UHI5 535 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 LRRC42Q9Y546 428 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 C2CD4BA6NLJ0 364 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 ABLIM1O14639 778 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 HDAC3O15379 428 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 PNPLA4P41247 253 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 NFYCQ13952 458 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 FRG1Q14331 258 aaKnown RBP4.68□□□□□ -1.66
VPS13C-201ENST00000249837 TCEAL1Q15170 157 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 ADRM1Q16186 407 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 AASDHQ4L235 1098 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-201ENST00000249837 TREML2Q5T2D2 321 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 OVOS1Q6IE37 1185 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 LRRC8BQ6P9F7 803 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 DNERQ8NFT8 737 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 ZNF483Q8TF39 744 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-201ENST00000249837 RBBP8Q99708 897 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 TKTL2Q9H0I9 626 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 COG4Q9H9E3 785 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 PCDHGC3Q9UN70 934 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 A0A087WXM4 84 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 TMEM114B3SHH9 223 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 ZSCAN9O15535 394 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-201ENST00000249837 MFSD11O43934 449 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 PLA2G6O60733 806 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 NPR3P17342 541 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 GALK1P51570 392 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 MAPK11Q15759 364 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 MAP1SQ66K74 1059 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-201ENST00000249837 PLD3Q8IV08 490 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 FBXO32Q969P5 355 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 RPRD1AQ96P16 312 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-201ENST00000249837 ACOX2Q99424 681 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 CDH19Q9H159 772 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 SLC38A7Q9NVC3 462 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 POLR2AP24928 1970 aaKnown RBP4.68□□□□□ -1.66
VPS13C-201ENST00000249837 SLC12A8A0AV02 714 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 THP07101 528 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 ADCYAP1R1P41586 468 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 RPL5P46777 297 aaKnown RBP4.68□□□□□ -1.66
VPS13C-201ENST00000249837 SERPINB10P48595 397 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 PSEN2P49810 448 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 AQP4P55087 323 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 LSM3P62310 102 aaKnown RBP4.68□□□□□ -1.66
VPS13C-201ENST00000249837 VGLL4Q14135 290 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 TLDC1Q6P9B6 456 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 GLB1LQ6UWU2 654 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 LDB1Q86U70 411 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-201ENST00000249837 C7orf43Q8WVR3 580 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 FBXL18Q96ME1 805 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 IL22Q9GZX6 179 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 ARHGEF4Q9NR80 690 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 PTGES3LE9PB15 166 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 STX7O15400 261 aaKnown RBP4.68□□□□□ -1.66
VPS13C-201ENST00000249837 B4GALT4O60513 344 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 TIPRLO75663 272 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 BCL10O95999 233 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 NR6A1Q15406 480 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 GNASQ5JWF2 1037 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 SPATA22Q8NHS9 363 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 BHMTQ93088 406 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 MUC3BQ9H195 1237 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 ATXN10Q9UBB4 475 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 TUBGCP4Q9UGJ1 667 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 CPB1P15086 417 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 ATP6V1B2P21281 511 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 FMO4P31512 558 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 TBX4P57082 545 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 OLIG2Q13516 323 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 CCDC92Q53HC0 331 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-201ENST00000249837 TMEM198Q66K66 360 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 CMASQ8NFW8 434 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-201ENST00000249837 RGS18Q9NS28 235 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 CACNG4Q9UBN1 327 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 EGFL7Q9UHF1 273 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 ZBTB24O43167 697 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-201ENST00000249837 GCATO75600 419 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 SOAT2O75908 522 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 AMHP03971 560 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 PYGLP06737 847 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 ADRA1BP35368 520 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 TRPC1P48995 793 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 CDC42EP1Q00587 391 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 DSELQ8IZU8 1212 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 FBXO27Q8NI29 283 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 RNF217Q8TC41 542 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 TRPC4APQ8TEL6 797 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 GIPC3Q8TF64 312 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 EMID1Q96A84 441 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-201ENST00000249837 APOL5Q9BWW9 433 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 POMKQ9H5K3 350 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 PDZD7Q9H5P4 517 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 SNX15Q9NRS6 342 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 CPA4Q9UI42 421 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 SLC30A1Q9Y6M5 507 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 TNPO2O14787 897 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms