RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 RAET1EQ8TD07 263 aa22.05■■□□□ 1.12
CLN6-201ENST00000249806 ISL2Q96A47 359 aa22.05■■□□□ 1.12
CLN6-201ENST00000249806 FUBP3Q96I24 572 aaKnown RBP eCLIP22.05■■□□□ 1.12
CLN6-201ENST00000249806 GPR62Q9BZJ7 368 aa22.05■■□□□ 1.12
CLN6-201ENST00000249806 ATXN3LQ9H3M9 355 aa22.05■■□□□ 1.12
CLN6-201ENST00000249806 STARD7Q9NQZ5 370 aa22.05■■□□□ 1.12
CLN6-201ENST00000249806 ADAM28Q9UKQ2 775 aa22.05■■□□□ 1.12
CLN6-201ENST00000249806 TLR6Q9Y2C9 796 aa22.05■■□□□ 1.12
CLN6-201ENST00000249806 A0A096LPK6 155 aa22.04■■□□□ 1.12
CLN6-201ENST00000249806 PSMD3O43242 534 aa22.04■■□□□ 1.12
CLN6-201ENST00000249806 PMPCBO75439 489 aa22.04■■□□□ 1.12
CLN6-201ENST00000249806 ARRB2P32121 409 aa22.04■■□□□ 1.12
CLN6-201ENST00000249806 GATMP50440 423 aa22.04■■□□□ 1.12
CLN6-201ENST00000249806 SERPINB8P50452 374 aa22.04■■□□□ 1.12
CLN6-201ENST00000249806 LHX8Q68G74 356 aa22.04■■□□□ 1.12
CLN6-201ENST00000249806 TFAP2DQ7Z6R9 452 aa22.04■■□□□ 1.12
CLN6-201ENST00000249806 SLC39A13Q96H72 371 aa22.04■■□□□ 1.12
CLN6-201ENST00000249806 C8orf48Q96LL4 319 aa22.04■■□□□ 1.12
CLN6-201ENST00000249806 MCMBPQ9BTE3 642 aa22.04■■□□□ 1.12
CLN6-201ENST00000249806 FICDQ9BVA6 458 aa22.04■■□□□ 1.12
CLN6-201ENST00000249806 NOL6Q9H6R4 1146 aaKnown RBP22.04■■□□□ 1.12
CLN6-201ENST00000249806 PPARGC1AQ9UBK2 798 aaKnown RBP22.04■■□□□ 1.12
CLN6-201ENST00000249806 HCSTQ9UBK5 93 aa22.04■■□□□ 1.12
CLN6-201ENST00000249806 SLC27A5Q9Y2P5 690 aa22.04■■□□□ 1.12
CLN6-201ENST00000249806 PCDHB5Q9Y5E4 795 aa22.04■■□□□ 1.12
CLN6-201ENST00000249806 ANXA9O76027 345 aa22.04■■□□□ 1.12
CLN6-201ENST00000249806 HTR7P34969 479 aa22.04■■□□□ 1.12
CLN6-201ENST00000249806 EFEMP1Q12805 493 aa22.04■■□□□ 1.12
CLN6-201ENST00000249806 NOGQ13253 232 aa22.04■■□□□ 1.12
CLN6-201ENST00000249806 AFMIDQ63HM1 303 aa22.04■■□□□ 1.12
CLN6-201ENST00000249806 VPS39Q96JC1 886 aa22.04■■□□□ 1.12
CLN6-201ENST00000249806 CADM1Q9BY67 442 aaKnown RBP22.04■■□□□ 1.12
CLN6-201ENST00000249806 FBXO44Q9H4M3 255 aa22.04■■□□□ 1.12
CLN6-201ENST00000249806 DNAJC16Q9Y2G8 782 aa22.04■■□□□ 1.12
CLN6-201ENST00000249806 CCDC22O60826 627 aa22.03■■□□□ 1.12
CLN6-201ENST00000249806 TRPA1O75762 1119 aa22.03■■□□□ 1.12
CLN6-201ENST00000249806 C2P06681 752 aa22.03■■□□□ 1.12
CLN6-201ENST00000249806 DBN1Q16643 649 aa22.03■■□□□ 1.12
CLN6-201ENST00000249806 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.03■■□□□ 1.12
CLN6-201ENST00000249806 PIWIL2Q8TC59 973 aaKnown RBP22.03■■□□□ 1.12
CLN6-201ENST00000249806 BTBD10Q9BSF8 475 aa22.03■■□□□ 1.12
CLN6-201ENST00000249806 WWP1Q9H0M0 922 aa22.03■■□□□ 1.12
CLN6-201ENST00000249806 TLE6Q9H808 572 aa22.03■■□□□ 1.12
CLN6-201ENST00000249806 IPO11Q9UI26 975 aaKnown RBP22.03■■□□□ 1.12
CLN6-201ENST00000249806 TBX4P57082 545 aa22.03■■□□□ 1.12
CLN6-201ENST00000249806 ITGA9Q13797 1035 aa22.03■■□□□ 1.12
CLN6-201ENST00000249806 GRM3Q14832 879 aa22.03■■□□□ 1.12
CLN6-201ENST00000249806 KRT72Q14CN4 511 aa22.03■■□□□ 1.12
CLN6-201ENST00000249806 PCID2Q5JVF3 399 aa22.03■■□□□ 1.12
CLN6-201ENST00000249806 PKN3Q6P5Z2 889 aa22.03■■□□□ 1.12
CLN6-201ENST00000249806 RINLQ6ZS11 566 aa22.03■■□□□ 1.12
CLN6-201ENST00000249806 TREML1Q86YW5 311 aa22.03■■□□□ 1.12
CLN6-201ENST00000249806 C1orf74Q96LT6 269 aa22.03■■□□□ 1.12
CLN6-201ENST00000249806 RILPQ96NA2 401 aa22.03■■□□□ 1.12
CLN6-201ENST00000249806 TUBB6Q9BUF5 446 aa22.03■■□□□ 1.12
CLN6-201ENST00000249806 MYLKQ15746 1914 aa22.02■■□□□ 1.12
CLN6-201ENST00000249806 DOCK4Q8N1I0 1966 aa22.02■■□□□ 1.12
CLN6-201ENST00000249806 AP3B1O00203 1094 aa22.02■■□□□ 1.12
CLN6-201ENST00000249806 HNRNPCL1O60812 293 aaKnown RBP22.02■■□□□ 1.12
CLN6-201ENST00000249806 CNTN5O94779 1100 aa22.02■■□□□ 1.12
CLN6-201ENST00000249806 SERPINE1P05121 402 aa22.02■■□□□ 1.12
CLN6-201ENST00000249806 ESRRAP11474 423 aaPredicted RBP22.02■■□□□ 1.12
CLN6-201ENST00000249806 CPA3P15088 417 aa22.02■■□□□ 1.12
CLN6-201ENST00000249806 GM2AP17900 193 aa22.02■■□□□ 1.12
CLN6-201ENST00000249806 SAT1P21673 171 aa22.02■■□□□ 1.12
CLN6-201ENST00000249806 CALB2P22676 271 aa22.02■■□□□ 1.12
CLN6-201ENST00000249806 CCND1P24385 295 aa22.02■■□□□ 1.12
CLN6-201ENST00000249806 PSMD5Q16401 504 aa22.02■■□□□ 1.12
CLN6-201ENST00000249806 WLSQ5T9L3 541 aa22.02■■□□□ 1.12
CLN6-201ENST00000249806 ESRP1Q6NXG1 681 aaKnown RBP22.02■■□□□ 1.12
CLN6-201ENST00000249806 SLC43A3Q8NBI5 491 aa22.02■■□□□ 1.12
CLN6-201ENST00000249806 TMEM161AQ9NX61 479 aa22.02■■□□□ 1.12
CLN6-201ENST00000249806 SLC39A10Q9ULF5 831 aa22.02■■□□□ 1.12
CLN6-201ENST00000249806 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.02■■□□□ 1.11
CLN6-201ENST00000249806 VGLL3A8MV65 326 aa22.02■■□□□ 1.11
CLN6-201ENST00000249806 SYN3O14994 580 aa22.02■■□□□ 1.11
CLN6-201ENST00000249806 RALBP11234 206 aa22.02■■□□□ 1.11
CLN6-201ENST00000249806 GABRB3P28472 473 aa22.02■■□□□ 1.11
CLN6-201ENST00000249806 ADRA1AP35348 466 aa22.02■■□□□ 1.11
CLN6-201ENST00000249806 CHRNA4P43681 627 aa22.02■■□□□ 1.11
CLN6-201ENST00000249806 ALDH18A1P54886 795 aaKnown RBP22.02■■□□□ 1.11
CLN6-201ENST00000249806 CSE1LP55060 971 aaKnown RBP22.02■■□□□ 1.11
CLN6-201ENST00000249806 CCDC153Q494R4 210 aa22.02■■□□□ 1.11
CLN6-201ENST00000249806 ALFQ53S48 1182 aa22.02■■□□□ 1.11
CLN6-201ENST00000249806 MS4A13Q5J8X5 152 aa22.02■■□□□ 1.11
CLN6-201ENST00000249806 PDPK2PQ6A1A2 396 aa22.02■■□□□ 1.11
CLN6-201ENST00000249806 TIGD7Q6NT04 549 aaPredicted RBP22.02■■□□□ 1.11
CLN6-201ENST00000249806 MSANTD2Q6P1R3 559 aa22.02■■□□□ 1.11
CLN6-201ENST00000249806 MIB1Q86YT6 1006 aa22.02■■□□□ 1.11
CLN6-201ENST00000249806 DBF4BQ8NFT6 615 aa22.02■■□□□ 1.11
CLN6-201ENST00000249806 MRGPRX2Q96LB1 330 aa22.02■■□□□ 1.11
CLN6-201ENST00000249806 SORT1Q99523 831 aa22.02■■□□□ 1.11
CLN6-201ENST00000249806 CRISPLD1Q9H336 500 aa22.02■■□□□ 1.11
CLN6-201ENST00000249806 PNPOQ9NVS9 261 aa22.02■■□□□ 1.11
CLN6-201ENST00000249806 TAS2R1Q9NYW7 299 aa22.02■■□□□ 1.11
CLN6-201ENST00000249806 SLC2A6Q9UGQ3 507 aa22.02■■□□□ 1.11
CLN6-201ENST00000249806 TET1Q8NFU7 2136 aa22.01■■□□□ 1.11
CLN6-201ENST00000249806 CAPN14A8MX76 684 aa22.01■■□□□ 1.11
CLN6-201ENST00000249806 ENPP3O14638 875 aa22.01■■□□□ 1.11
CLN6-201ENST00000249806 TIMM44O43615 452 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms