RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 ZDHHC5Q9C0B5 715 aa21.63■■□□□ 1.05
HCFC1R1-201ENST00000248089 TM9SF3Q9HD45 589 aa21.63■■□□□ 1.05
HCFC1R1-201ENST00000248089 FARP1Q9Y4F1 1045 aaPredicted RBP21.63■■□□□ 1.05
HCFC1R1-201ENST00000248089 MCF2LO15068 1137 aa21.62■■□□□ 1.05
HCFC1R1-201ENST00000248089 ALOX15BO15296 676 aa21.62■■□□□ 1.05
HCFC1R1-201ENST00000248089 CSRP1P21291 193 aaKnown RBP21.62■■□□□ 1.05
HCFC1R1-201ENST00000248089 DRD3P35462 400 aa21.62■■□□□ 1.05
HCFC1R1-201ENST00000248089 PRKCIP41743 596 aa21.62■■□□□ 1.05
HCFC1R1-201ENST00000248089 MAPKAPK2P49137 400 aa21.62■■□□□ 1.05
HCFC1R1-201ENST00000248089 CSNK1EP49674 416 aaKnown RBP21.62■■□□□ 1.05
HCFC1R1-201ENST00000248089 ZNF252P-AS1Q0IIN9 211 aa21.62■■□□□ 1.05
HCFC1R1-201ENST00000248089 TEAD4Q15561 434 aa21.62■■□□□ 1.05
HCFC1R1-201ENST00000248089 TDRD12Q587J7 1177 aaKnown RBP21.62■■□□□ 1.05
HCFC1R1-201ENST00000248089 RETSATQ6NUM9 610 aa21.62■■□□□ 1.05
HCFC1R1-201ENST00000248089 TMC6Q7Z403 805 aa21.62■■□□□ 1.05
HCFC1R1-201ENST00000248089 ADAT2Q7Z6V5 191 aaKnown RBP21.62■■□□□ 1.05
HCFC1R1-201ENST00000248089 PYROXD2Q8N2H3 581 aa21.62■■□□□ 1.05
HCFC1R1-201ENST00000248089 VCPIP1Q96JH7 1222 aa21.62■■□□□ 1.05
HCFC1R1-201ENST00000248089 EDEM3Q9BZQ6 932 aa21.62■■□□□ 1.05
HCFC1R1-201ENST00000248089 TNKS2Q9H2K2 1166 aa21.62■■□□□ 1.05
HCFC1R1-201ENST00000248089 SLC32A1Q9H598 525 aa21.62■■□□□ 1.05
HCFC1R1-201ENST00000248089 NDFIP2Q9NV92 336 aa21.62■■□□□ 1.05
HCFC1R1-201ENST00000248089 PARVAQ9NVD7 372 aa21.62■■□□□ 1.05
HCFC1R1-201ENST00000248089 DNAAF2Q9NVR5 837 aaKnown RBP21.62■■□□□ 1.05
HCFC1R1-201ENST00000248089 NEU3Q9UQ49 428 aa21.62■■□□□ 1.05
HCFC1R1-201ENST00000248089 RHOQP17081 205 aa21.61■■□□□ 1.05
HCFC1R1-201ENST00000248089 ACVRL1P37023 503 aa21.61■■□□□ 1.05
HCFC1R1-201ENST00000248089 SERPINH1P50454 418 aaKnown RBP21.61■■□□□ 1.05
HCFC1R1-201ENST00000248089 CLCN6P51797 869 aa21.61■■□□□ 1.05
HCFC1R1-201ENST00000248089 OGDHQ02218 1023 aa21.61■■□□□ 1.05
HCFC1R1-201ENST00000248089 SCAPQ12770 1279 aa21.61■■□□□ 1.05
HCFC1R1-201ENST00000248089 SEMA3BQ13214 749 aa21.61■■□□□ 1.05
HCFC1R1-201ENST00000248089 FIGNQ5HY92 759 aa21.61■■□□□ 1.05
HCFC1R1-201ENST00000248089 NLRP14Q86W24 1093 aa21.61■■□□□ 1.05
HCFC1R1-201ENST00000248089 OR2A12Q8NGT7 310 aa21.61■■□□□ 1.05
HCFC1R1-201ENST00000248089 GRIN3AQ8TCU5 1115 aa21.61■■□□□ 1.05
HCFC1R1-201ENST00000248089 GAREM1Q9H706 876 aa21.61■■□□□ 1.05
HCFC1R1-201ENST00000248089 TMEM248Q9NWD8 314 aa21.61■■□□□ 1.05
HCFC1R1-201ENST00000248089 PPM1HQ9ULR3 514 aa21.61■■□□□ 1.05
HCFC1R1-201ENST00000248089 DOCK9Q9BZ29 2069 aa21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 TBC1D3DA0A087WVF3 549 aa21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 TBC1D3IA0A087WXS9 549 aa21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 TBC1D3EA0A087X179 549 aa21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 TBC1D3KA0A087X1G2 549 aa21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 TBC1D3FA6NER0 549 aaPredicted RBP21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 TBC1D3LB9A6J9 549 aa21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 KPNA3O00505 521 aaPredicted RBP21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 DDX3XO00571 662 aaKnown RBP eCLIP21.6■■□□□ 1.054e-14■■■■■ 45.1
HCFC1R1-201ENST00000248089 CREB3O43889 395 aa21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 RTN2O75298 545 aa21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 CER1O95813 267 aa21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 FTLP02792 175 aaPredicted RBP21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 CTSLP07711 333 aa21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 TBC1D3HP0C7X1 549 aa21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 CEACAM1P13688 526 aa21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 PSMA2P25787 234 aa21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 CHRNA3P32297 505 aa21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 ETFBP38117 255 aa21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 RECQLP46063 649 aaPredicted RBP21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 DNA2P51530 1060 aa21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 ARF5P84085 180 aa21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 BNC1Q01954 994 aa21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 CNTN1Q12860 1018 aa21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 MAMLD1Q13495 774 aa21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 SKOR2Q2VWA4 1001 aaPredicted RBP21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 TBC1D3GQ6DHY5 549 aa21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 TBC1D3CQ6IPX1 549 aa21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 ZNF354CQ86Y25 554 aa21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 TBC1D3Q8IZP1 549 aaPredicted RBP21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 CPLX3Q8WVH0 158 aa21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 ZNF653Q96CK0 615 aa21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 SLC6A18Q96N87 628 aa21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 IL21RQ9HBE5 538 aa21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 IFNKQ9P0W0 207 aa21.6■■□□□ 1.05
HCFC1R1-201ENST00000248089 A0A1W2PPC4 97 aa21.59■■□□□ 1.05
HCFC1R1-201ENST00000248089 RAMP2O60895 175 aa21.59■■□□□ 1.05
HCFC1R1-201ENST00000248089 GJB3O75712 270 aa21.59■■□□□ 1.05
HCFC1R1-201ENST00000248089 ZMPSTE24O75844 475 aa21.59■■□□□ 1.05
HCFC1R1-201ENST00000248089 CD59P13987 128 aa21.59■■□□□ 1.05
HCFC1R1-201ENST00000248089 EPHB2P29323 1055 aa21.59■■□□□ 1.05
HCFC1R1-201ENST00000248089 PBX1P40424 430 aa21.59■■□□□ 1.05
HCFC1R1-201ENST00000248089 GRIA4P48058 902 aa21.59■■□□□ 1.05
HCFC1R1-201ENST00000248089 PPP2CBP62714 309 aa21.59■■□□□ 1.05
HCFC1R1-201ENST00000248089 PPP2CAP67775 309 aa21.59■■□□□ 1.05
HCFC1R1-201ENST00000248089 HLA-BQ31612 363 aa21.59■■□□□ 1.05
HCFC1R1-201ENST00000248089 AGBL4Q5VU57 503 aa21.59■■□□□ 1.05
HCFC1R1-201ENST00000248089 PLEKHA7Q6IQ23 1121 aa21.59■■□□□ 1.05
HCFC1R1-201ENST00000248089 IL27RAQ6UWB1 636 aa21.59■■□□□ 1.05
HCFC1R1-201ENST00000248089 CHST14Q8NCH0 376 aa21.59■■□□□ 1.05
HCFC1R1-201ENST00000248089 KNL1Q8NG31 2342 aa21.59■■□□□ 1.05
HCFC1R1-201ENST00000248089 ARHGEF2Q92974 986 aaKnown RBP21.59■■□□□ 1.05
HCFC1R1-201ENST00000248089 EPAS1Q99814 870 aa21.59■■□□□ 1.05
HCFC1R1-201ENST00000248089 ORAI3Q9BRQ5 295 aa21.59■■□□□ 1.05
HCFC1R1-201ENST00000248089 CNOT8Q9UFF9 292 aaKnown RBP21.59■■□□□ 1.05
HCFC1R1-201ENST00000248089 FZD10Q9ULW2 581 aa21.59■■□□□ 1.05
HCFC1R1-201ENST00000248089 ANKRD6Q9Y2G4 727 aa21.59■■□□□ 1.05
HCFC1R1-201ENST00000248089 FCF1Q9Y324 198 aaKnown RBP21.59■■□□□ 1.05
HCFC1R1-201ENST00000248089 ACTL7AQ9Y615 435 aa21.59■■□□□ 1.05
HCFC1R1-201ENST00000248089 PCNX2A6NKB5 2137 aa21.58■■□□□ 1.05
HCFC1R1-201ENST00000248089 A0A1W2PQJ5 194 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms