RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 MAVSQ7Z434 540 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 PAF1Q8N7H5 531 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 FAM156AQ8NDB6 213 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 ZSCAN18Q8TBC5 510 aaPredicted RBP12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 SORCS3Q9UPU3 1222 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 CAPN8A6NHC0 703 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 TMEM233B4DJY2 109 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 GPR32O75388 356 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 ITGAXP20702 1163 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 PIK3R1P27986 724 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 DAOAP59103 153 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 CDC42EP1Q00587 391 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 CYLC2Q14093 348 aaPredicted RBP12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 AP1ARQ63HQ0 302 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 STEAP4Q687X5 459 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 ARHGAP36Q6ZRI8 547 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 TFAP2DQ7Z6R9 452 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 METTL23Q86XA0 190 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 LINC01465Q8N7H1 131 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 NPLOC4Q8TAT6 608 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 PPP2R3CQ969Q6 453 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 PPWD1Q96BP3 646 aaKnown RBP12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 MKS1Q9NXB0 559 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 IGSF9Q9P2J2 1179 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 RCOR3Q9P2K3 495 aaPredicted RBP12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 PCDHB12Q9Y5F1 795 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 C17orf102A2RUQ5 167 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 NEMP2A6NFY4 417 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 PGM3O95394 542 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 MPOP05164 745 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 THRAP10827 490 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 STMN1P16949 149 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 BRCC3P46736 316 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 PSEN1P49768 467 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 CDK7P50613 346 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 SH2D4BQ5SQS7 431 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 MYLK4Q86YV6 388 aaPredicted RBP12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 KYQ8NBH2 561 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 PPHLN1Q8NEY8 458 aaKnown RBP12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 CENPKQ9BS16 269 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 COPS7BQ9H9Q2 264 aaPredicted RBP12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 CRTAC1Q9NQ79 661 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 RBM22Q9NW64 420 aaKnown RBP eCLIP12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 SFMBT1Q9UHJ3 866 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 CCL22O00626 93 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 GRIK1P39086 918 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 RPL14P50914 215 aaKnown RBP12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 ARPP19P56211 112 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 NME5P56597 212 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 ZBTB6Q15916 424 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 IQSEC1Q6DN90 963 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 ZNF280DQ6N043 979 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 ESRP1Q6NXG1 681 aaKnown RBP12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 BNC2Q6ZN30 1099 aaPredicted RBP12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 RPS27LQ71UM5 84 aaKnown RBP12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 PCDH20Q8N6Y1 951 aaKnown RBP12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 CNBD2Q96M20 576 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 SIKE1Q9BRV8 207 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 IL22Q9GZX6 179 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 ZCWPW1Q9H0M4 648 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 ARHGEF38Q9NXL2 777 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 MPP6Q9NZW5 540 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 PDP2Q9P2J9 529 aa12.82□□□□□ -0.36
RAB3IP-201ENST00000247833 STX16-NPEPL1H3BU86 382 aa12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 MTSS1O43312 755 aa12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 ALDH1A2O94788 518 aa12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 STAMBPO95630 424 aa12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 IL1BP01584 269 aa12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 CHRNA4P43681 627 aa12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 NAB1Q13506 487 aa12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 INSCQ1MX18 579 aa12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 LSM12Q3MHD2 195 aaKnown RBP12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 SFT2D3Q587I9 215 aa12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 IYDQ6PHW0 289 aa12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 NXNL1Q96CM4 212 aa12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 SMOQ99835 787 aa12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 ANLNQ9NQW6 1124 aa12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 NOD1Q9Y239 953 aa12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 FAM95CA0A1B0GW59 222 aa12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 HDAC3O15379 428 aa12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 DDHD2O94830 711 aa12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 HMBSP08397 361 aa12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 ETFBP38117 255 aa12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 COG7P83436 770 aa12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 BTKQ06187 659 aa12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 NOMO2Q5JPE7 1267 aa12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 SCAMP5Q8TAC9 235 aa12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 MLPHQ9BV36 600 aaPredicted RBP12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 GBA3Q9H227 469 aa12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 EIF2B3Q9NR50 452 aaKnown RBP12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 DNAJC28Q9NX36 388 aa12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 APPL1Q9UKG1 709 aa12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 SMIM35A0A1B0GVV1 85 aa12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 BUD23O43709 281 aaKnown RBP12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 FBXO21O94952 628 aa12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 TFEBP19484 476 aa12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 MAXP61244 160 aa12.81□□□□□ -0.36
RAB3IP-201ENST00000247833 RBBP5Q15291 538 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms