RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 PPCSQ9HAB8 311 aa15.51■□□□□ 0.07
HDHD3-201ENST00000238379 CASS4Q9NQ75 786 aa15.51■□□□□ 0.07
HDHD3-201ENST00000238379 PIH1D1Q9NWS0 290 aaKnown RBP15.51■□□□□ 0.07
HDHD3-201ENST00000238379 UBP1Q9NZI7 540 aa15.51■□□□□ 0.07
HDHD3-201ENST00000238379 DNMT3BQ9UBC3 853 aaKnown RBP15.51■□□□□ 0.07
HDHD3-201ENST00000238379 TBC1D30Q9Y2I9 924 aa15.51■□□□□ 0.07
HDHD3-201ENST00000238379 AAR2Q9Y312 384 aaKnown RBP15.51■□□□□ 0.07
HDHD3-201ENST00000238379 MAD1L1Q9Y6D9 718 aa15.51■□□□□ 0.07
HDHD3-201ENST00000238379 CHD5Q8TDI0 1954 aa15.51■□□□□ 0.07
HDHD3-201ENST00000238379 DOCK6Q96HP0 2047 aa15.51■□□□□ 0.07
HDHD3-201ENST00000238379 POC1B-GALNT4F8VUJ3 575 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 PER2O15055 1255 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 PSMD3O43242 534 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 PRAMEF11O60813 436 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 MOSPD3O75425 235 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 GSTA2P09210 222 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 HNRNPA1P09651 372 aaKnown RBP eCLIP15.5■□□□□ 0.07
HDHD3-201ENST00000238379 MGAT1P26572 445 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 HOXD9P28356 352 aaPredicted RBP15.5■□□□□ 0.07
HDHD3-201ENST00000238379 HPDP32754 393 aaPredicted RBP15.5■□□□□ 0.07
HDHD3-201ENST00000238379 SESN2P58004 480 aaPredicted RBP15.5■□□□□ 0.07
HDHD3-201ENST00000238379 SKOR1P84550 965 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 RASA2Q15283 850 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 MARC1Q5VT66 337 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 TTC39BQ5VTQ0 682 aaPredicted RBP15.5■□□□□ 0.07
HDHD3-201ENST00000238379 UNC5AQ6ZN44 842 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 HTR3DQ70Z44 454 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 ZNF354CQ86Y25 554 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 CYP4X1Q8N118 509 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 RIBC1Q8N443 379 aaPredicted RBP15.5■□□□□ 0.07
HDHD3-201ENST00000238379 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.5■□□□□ 0.07
HDHD3-201ENST00000238379 PABPC5Q96DU9 382 aaKnown RBP15.5■□□□□ 0.07
HDHD3-201ENST00000238379 TCEAL4Q96EI5 215 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 TRIM56Q9BRZ2 755 aaKnown RBP15.5■□□□□ 0.07
HDHD3-201ENST00000238379 DHRS4Q9BTZ2 278 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 LRRC40Q9H9A6 602 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 PDFQ9HBH1 243 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 SLC24A2Q9UI40 661 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.5■□□□□ 0.07
HDHD3-201ENST00000238379 ILVBLA1L0T0 632 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 PIAS1O75925 651 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 ANXA9O76027 345 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 FGF19O95750 216 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 MT-CYBP00156 380 aaPredicted RBP15.5■□□□□ 0.07
HDHD3-201ENST00000238379 GEMIN4P57678 1058 aaKnown RBP15.5■□□□□ 0.07
HDHD3-201ENST00000238379 CRADDP78560 199 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 ZNF177Q13360 481 aaPredicted RBP15.5■□□□□ 0.07
HDHD3-201ENST00000238379 EFTUD2Q15029 972 aaKnown RBP eCLIP15.5■□□□□ 0.077e-7■□□□□ 9.7
HDHD3-201ENST00000238379 KLHL38Q2WGJ6 581 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 SETD3Q86TU7 594 aaPredicted RBP15.5■□□□□ 0.07
HDHD3-201ENST00000238379 OR7D4Q8NG98 312 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 STAMBPL1Q96FJ0 436 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 ABHD8Q96I13 439 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 PPP1R2P1Q96PQ5 205 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 CYTH2Q99418 400 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 CFAP97Q9P2B7 532 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 TBK1Q9UHD2 729 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 TTLL3Q9Y4R7 772 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 HCFC2Q9Y5Z7 792 aa15.5■□□□□ 0.07
HDHD3-201ENST00000238379 NEBLO76041 1014 aa15.49■□□□□ 0.07
HDHD3-201ENST00000238379 RHOP08100 348 aa15.49■□□□□ 0.07
HDHD3-201ENST00000238379 ATP1A2P50993 1020 aa15.49■□□□□ 0.07
HDHD3-201ENST00000238379 PPP2R2AP63151 447 aa15.49■□□□□ 0.07
HDHD3-201ENST00000238379 TERF2Q15554 542 aa15.49■□□□□ 0.07
HDHD3-201ENST00000238379 CXorf57Q6NSI4 855 aaKnown RBP15.49■□□□□ 0.07
HDHD3-201ENST00000238379 RBM23Q86U06 439 aaKnown RBP15.49■□□□□ 0.07
HDHD3-201ENST00000238379 PRPF39Q86UA1 669 aaKnown RBP15.49■□□□□ 0.07
HDHD3-201ENST00000238379 EXOC3L1Q86VI1 746 aa15.49■□□□□ 0.07
HDHD3-201ENST00000238379 NSMCE1Q8WV22 266 aa15.49■□□□□ 0.07
HDHD3-201ENST00000238379 SLC25A51Q9H1U9 297 aa15.49■□□□□ 0.07
HDHD3-201ENST00000238379 CERS4Q9HA82 394 aa15.49■□□□□ 0.07
HDHD3-201ENST00000238379 NT5MQ9NPB1 228 aa15.49■□□□□ 0.07
HDHD3-201ENST00000238379 LSM7Q9UK45 103 aaKnown RBP15.49■□□□□ 0.07
HDHD3-201ENST00000238379 ARHGAP26Q9UNA1 814 aa15.49■□□□□ 0.07
HDHD3-201ENST00000238379 RANBP2P49792 3224 aaKnown RBP15.49■□□□□ 0.07
HDHD3-201ENST00000238379 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.48■□□□□ 0.07
HDHD3-201ENST00000238379 XYLBO75191 536 aa15.48■□□□□ 0.07
HDHD3-201ENST00000238379 PRKCHP24723 683 aa15.48■□□□□ 0.07
HDHD3-201ENST00000238379 STX2P32856 288 aa15.48■□□□□ 0.07
HDHD3-201ENST00000238379 GEMP55040 296 aa15.48■□□□□ 0.07
HDHD3-201ENST00000238379 LBRQ14739 615 aaKnown RBP15.48■□□□□ 0.07
HDHD3-201ENST00000238379 SLC5A9Q2M3M2 681 aa15.48■□□□□ 0.07
HDHD3-201ENST00000238379 KBTBD12Q3ZCT8 623 aa15.48■□□□□ 0.07
HDHD3-201ENST00000238379 GPR158Q5T848 1215 aa15.48■□□□□ 0.07
HDHD3-201ENST00000238379 TMCO4Q5TGY1 634 aa15.48■□□□□ 0.07
HDHD3-201ENST00000238379 STEAP4Q687X5 459 aa15.48■□□□□ 0.07
HDHD3-201ENST00000238379 NAPEPLDQ6IQ20 393 aa15.48■□□□□ 0.07
HDHD3-201ENST00000238379 ADGRD2Q7Z7M1 963 aa15.48■□□□□ 0.07
HDHD3-201ENST00000238379 LINC00523Q86TU6 105 aa15.48■□□□□ 0.07
HDHD3-201ENST00000238379 CCNJLQ8IV13 435 aa15.48■□□□□ 0.07
HDHD3-201ENST00000238379 ARFGAP2Q8N6H7 521 aa15.48■□□□□ 0.07
HDHD3-201ENST00000238379 HJURPQ8NCD3 748 aaPredicted RBP15.48■□□□□ 0.07
HDHD3-201ENST00000238379 GSDMBQ8TAX9 411 aa15.48■□□□□ 0.07
HDHD3-201ENST00000238379 TMA16Q96EY4 203 aaKnown RBP15.48■□□□□ 0.07
HDHD3-201ENST00000238379 IMP4Q96G21 291 aaKnown RBP15.48■□□□□ 0.07
HDHD3-201ENST00000238379 ZNF599Q96NL3 588 aa15.48■□□□□ 0.07
HDHD3-201ENST00000238379 APOL2Q9BQE5 337 aa15.48■□□□□ 0.07
HDHD3-201ENST00000238379 PBX4Q9BYU1 374 aa15.48■□□□□ 0.07
HDHD3-201ENST00000238379 SMG9Q9H0W8 520 aaKnown RBP15.48■□□□□ 0.07
HDHD3-201ENST00000238379 SYBUQ9NX95 663 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms