RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 FNDC3AQ9Y2H6 1198 aaKnown RBP11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 A0A0D9SEW6 157 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 DRGXA6NNA5 263 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 SNAP91O60641 907 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 SRFP11831 508 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 PECAM1P16284 738 aaPredicted RBP11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 MZF1P28698 734 aaPredicted RBP11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 SERPINA4P29622 427 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 SOX9P48436 509 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 HTR4Q13639 388 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 DLG2Q15700 870 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 FAM46CQ5VWP2 391 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 KIAA1324Q6UXG2 1013 aaKnown RBP11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 UMODL1-AS1Q8N2C9 162 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 CASKIN2Q8WXE0 1202 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 DNASE1L2Q92874 299 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 P2RY11Q96G91 374 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 EXOC2Q96KP1 924 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 TSPYL1Q9H0U9 437 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 PRM3Q9NNZ6 103 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 SPECC1L-ADORA2AF8WAN1 911 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 LIASO43766 372 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 SLC7A5Q01650 507 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 PAFAH1B3Q15102 231 aaKnown RBP11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 FBXO43Q4G163 708 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 NAPEPLDQ6IQ20 393 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 PALM2Q8IXS6 379 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 TRPV4Q9HBA0 871 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 PPANQ9NQ55 473 aaKnown RBP11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 AP3B1O00203 1094 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 MATN3O15232 486 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 TTI1O43156 1089 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 DRD1P21728 446 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 CES1P23141 567 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 KCNC3Q14003 757 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 HNRNPDQ14103 355 aaKnown RBP11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 TTC31Q49AM3 519 aaPredicted RBP11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 SYCP2LQ5T4T6 812 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 CREG2Q8IUH2 290 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 SLC25A41Q8N5S1 370 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 OLIG1Q8TAK6 271 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 SEMA3CQ99985 751 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 ADGRE3Q9BY15 652 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 POLMQ9NP87 494 aaPredicted RBP11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 COL4A6Q14031 1691 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 FAXCQ5TGI0 409 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 DENND2CQ68D51 928 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 SLC9A4Q6AI14 798 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 TERB1Q8NA31 727 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 OMDQ99983 421 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 RPP25Q9BUL9 199 aaKnown RBP11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 ATP13A3Q9H7F0 1226 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 ARHGEF3Q9NR81 526 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 UBP1Q9NZI7 540 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 DRG1Q9Y295 367 aaKnown RBP11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 FCF1Q9Y324 198 aaKnown RBP11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 MAP3K13O43283 966 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 KDELR3O43731 214 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 CD70P32970 193 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 PTPN7P35236 360 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 MAXP61244 160 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 POLR2LP62875 67 aaKnown RBP11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 IFFO1Q0D2I5 559 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 DPYSQ14117 519 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 RFTN1Q14699 578 aaPredicted RBP11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 OTUD1Q5VV17 481 aaPredicted RBP11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 IZUMO3Q5VZ72 239 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 JAMLQ86YT9 394 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 PQLC3Q8N755 202 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 KIAA1958Q8N8K9 716 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 ARHGEF2Q92974 986 aaKnown RBP11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 MSANTD3Q96H12 275 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 SNF8Q96H20 258 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 CCDC77Q9BR77 488 aa11.33□□□□□ -0.6
TNFAIP3-201ENST00000237289 BRWD1Q9NSI6 2320 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 A0A0A0MRY4 1105 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 PRR23AA6NEV1 266 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 FAM47DPA6NHR8 397 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 GOLGA8MH3BSY2 632 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 RRP9O43818 475 aaKnown RBP11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 CPP00450 1065 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 HOXD9P28356 352 aaPredicted RBP11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 GALK1P51570 392 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 GRM3Q14832 879 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 BBS9Q3SYG4 887 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 TEX44Q53QW1 395 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 EOGTQ5NDL2 527 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 ANKRD20A2Q5SQ80 823 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 ANKRD20A1Q5TYW2 823 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 ANKRD20A3Q5VUR7 823 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 FBXL19Q6PCT2 694 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 Q6ZNB5 142 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 LINC00523Q86TU6 105 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 SIX5Q8N196 739 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 RASGEF1CQ8N431 466 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 SPATA13Q96N96 652 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 TNKS2Q9H2K2 1166 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 CALCOCO1Q9P1Z2 691 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 FAM153AQ9UHL3 310 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms