RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 THEMIS2Q5TEJ8 643 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 C6orf163Q5TEZ5 329 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 TMEM135Q86UB9 458 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 CATSPER2Q96P56 530 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 BRD8Q9H0E9 1235 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 SPON1Q9HCB6 807 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 CYP4F12Q9HCS2 524 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 ZDHHC2Q9UIJ5 367 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 ADAMTS6Q9UKP5 1117 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 ZNF487B1APH4 448 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 BUD23O43709 281 aaKnown RBP9.31□□□□□ -0.92
SYDE2-201ENST00000234668 LUC7L3O95232 432 aaKnown RBP9.31□□□□□ -0.92
SYDE2-201ENST00000234668 PIGNO95427 931 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 SKIP12755 728 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 HNRNPLP14866 589 aaKnown RBP eCLIP9.31□□□□□ -0.92
SYDE2-201ENST00000234668 ACADSP16219 412 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 ITGAXP20702 1163 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 CNTFP26441 200 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 GRIA4P48058 902 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 PPIDQ08752 370 aaKnown RBP9.31□□□□□ -0.92
SYDE2-201ENST00000234668 ASPHQ12797 758 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 ZNF789Q5FWF6 425 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 AGMOQ6ZNB7 445 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 BHLHA9Q7RTU4 235 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 TFAP2DQ7Z6R9 452 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 CEP97Q8IW35 865 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 MFSD6LQ8IWD5 586 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 SCN4BQ8IWT1 228 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 FAM156AQ8NDB6 213 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 ZC3H15Q8WU90 426 aaKnown RBP9.31□□□□□ -0.92
SYDE2-201ENST00000234668 NXNL1Q96CM4 212 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 RTP3Q9BQQ7 232 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 FICDQ9BVA6 458 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 ACE2Q9BYF1 805 aaPredicted RBP9.31□□□□□ -0.92
SYDE2-201ENST00000234668 EBF3Q9H4W6 596 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 NDE1Q9NXR1 346 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 TLK1Q9UKI8 766 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 HDCP19113 662 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 AOC1P19801 751 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 SP100P23497 879 aaPredicted RBP9.3□□□□□ -0.92
SYDE2-201ENST00000234668 CD52P31358 61 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 SERPINB8P50452 374 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 ITKQ08881 620 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 TBL3Q12788 808 aaKnown RBP9.3□□□□□ -0.92
SYDE2-201ENST00000234668 SEMA3BQ13214 749 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 FSCN1Q16658 493 aaKnown RBP9.3□□□□□ -0.92
SYDE2-201ENST00000234668 XKR4Q5GH76 650 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 NET1Q7Z628 596 aaPredicted RBP9.3□□□□□ -0.92
SYDE2-201ENST00000234668 ZNF467Q7Z7K2 595 aaPredicted RBP9.3□□□□□ -0.92
SYDE2-201ENST00000234668 C14orf80Q86SX3 495 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 ZNF354CQ86Y25 554 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 MYLK4Q86YV6 388 aaPredicted RBP9.3□□□□□ -0.92
SYDE2-201ENST00000234668 ACMSDQ8TDX5 336 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 DQX1Q8TE96 717 aaKnown RBP9.3□□□□□ -0.92
SYDE2-201ENST00000234668 TEKT5Q96M29 485 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 ZNF184Q99676 751 aaPredicted RBP9.3□□□□□ -0.92
SYDE2-201ENST00000234668 CASS4Q9NQ75 786 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 CHST12Q9NRB3 414 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 CORO1CQ9ULV4 474 aaPredicted RBP9.3□□□□□ -0.92
SYDE2-201ENST00000234668 TLL2Q9Y6L7 1015 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 PLXNA1Q9UIW2 1896 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 HHLA1C9JL84 531 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 TXNDC9O14530 226 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 MGEA5O60502 916 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 TRIM13O60858 407 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 GJB3O75712 270 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 CHRNA1P02708 482 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 SBK3P0C264 359 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 NUDT2P50583 147 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 KLF10Q13118 480 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 MAP2K5Q13163 448 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 CCNIQ14094 377 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 ARL13BQ3SXY8 428 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 DNAL1Q4LDG9 190 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 SFT2D3Q587I9 215 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 KCTD11Q693B1 232 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 GDF6Q6KF10 455 aaPredicted RBP9.3□□□□□ -0.92
SYDE2-201ENST00000234668 LIMS2Q7Z4I7 341 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 OR10T2Q8NGX3 314 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 KCTD13Q8WZ19 329 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 KLHL5Q96PQ7 755 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 CDH19Q9H159 772 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 GBA3Q9H227 469 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 MMADHCQ9H3L0 296 aaPredicted RBP9.3□□□□□ -0.92
SYDE2-201ENST00000234668 EIF2B3Q9NR50 452 aaKnown RBP9.3□□□□□ -0.92
SYDE2-201ENST00000234668 RCOR3Q9P2K3 495 aaPredicted RBP9.3□□□□□ -0.92
SYDE2-201ENST00000234668 CDH22Q9UJ99 828 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 SSX2IPQ9Y2D8 614 aa9.3□□□□□ -0.92
SYDE2-201ENST00000234668 SMIM24O75264 130 aa9.29□□□□□ -0.92
SYDE2-201ENST00000234668 KLHL2O95198 593 aa9.29□□□□□ -0.92
SYDE2-201ENST00000234668 COX4I1P13073 169 aa9.29□□□□□ -0.92
SYDE2-201ENST00000234668 PEX2P28328 305 aa9.29□□□□□ -0.92
SYDE2-201ENST00000234668 AP2B1P63010 937 aa9.29□□□□□ -0.92
SYDE2-201ENST00000234668 DLG1Q12959 904 aa9.29□□□□□ -0.92
SYDE2-201ENST00000234668 FAM110CQ1W6H9 321 aa9.29□□□□□ -0.92
SYDE2-201ENST00000234668 TRMT5Q32P41 509 aaKnown RBP9.29□□□□□ -0.92
SYDE2-201ENST00000234668 LSM12Q3MHD2 195 aaKnown RBP9.29□□□□□ -0.92
SYDE2-201ENST00000234668 SPRYD7Q5W111 196 aa9.29□□□□□ -0.92
SYDE2-201ENST00000234668 CYS1Q717R9 158 aa9.29□□□□□ -0.92
SYDE2-201ENST00000234668 PDZD4Q76G19 769 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms