RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 LIPMQ5VYY2 423 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 ANKRD49Q8WVL7 239 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 PHF21BQ96EK2 531 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 NPM3O75607 178 aaKnown RBP8.33□□□□□ -1.08
APOB-201ENST00000233242 LRIG2O94898 1065 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 USP46P62068 366 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 DENND2DQ9H6A0 471 aaPredicted RBP8.33□□□□□ -1.08
APOB-201ENST00000233242 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.33□□□□□ -1.08
APOB-201ENST00000233242 CACNA1FO60840 1977 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.33□□□□□ -1.08
APOB-201ENST00000233242 FSCN2O14926 492 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 DBTP11182 482 aaKnown RBP8.33□□□□□ -1.08
APOB-201ENST00000233242 IDH2P48735 452 aaKnown RBP8.33□□□□□ -1.08
APOB-201ENST00000233242 PLIN5Q00G26 463 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 CDH18Q13634 790 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 MPZL3Q6UWV2 235 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 NT5DC4Q86YG4 428 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 SLC38A2Q96QD8 506 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 TDRD3Q9H7E2 651 aaKnown RBP8.33□□□□□ -1.08
APOB-201ENST00000233242 CDHR5Q9HBB8 845 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 MORF4L1Q9UBU8 362 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 NCF1BA6NI72 391 aaPredicted RBP8.33□□□□□ -1.08
APOB-201ENST00000233242 NCF1CA8MVU1 366 aaPredicted RBP8.33□□□□□ -1.08
APOB-201ENST00000233242 NCF1P14598 390 aaPredicted RBP8.33□□□□□ -1.08
APOB-201ENST00000233242 C12orf56Q8IXR9 622 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 NKAPQ8N5F7 415 aaKnown RBP8.33□□□□□ -1.08
APOB-201ENST00000233242 OR2T34Q8NGX1 318 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 OR2T3Q8NH03 318 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 TMCO6Q96DC7 493 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 RBM4BQ9BQ04 359 aaKnown RBP8.33□□□□□ -1.08
APOB-201ENST00000233242 RBM4Q9BWF3 364 aaKnown RBP8.33□□□□□ -1.08
APOB-201ENST00000233242 KLHL1Q9NR64 748 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 TBC1D30Q9Y2I9 924 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 MDM4O15151 490 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 GRK3P35626 688 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 SPP2Q13103 211 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 HIPK1Q86Z02 1210 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 HM13Q8TCT9 377 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 ACOX2Q99424 681 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 LNPEPQ9UIQ6 1025 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 SNAP23O00161 211 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 CPSF4O95639 269 aaKnown RBP8.33□□□□□ -1.08
APOB-201ENST00000233242 FYNP06241 537 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 NOS3P29474 1203 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 TLCD1Q96CP7 247 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 CHST7Q9NS84 486 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 IRAK3Q9Y616 596 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 GUCA1AP43080 201 aaPredicted RBP8.33□□□□□ -1.08
APOB-201ENST00000233242 MAMLD1Q13495 774 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 SEPT12Q8IYM1 358 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 ZNF34Q8IZ26 560 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 MNTQ99583 582 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 SENP6Q9GZR1 1112 aaPredicted RBP8.33□□□□□ -1.08
APOB-201ENST00000233242 RIOX1Q9H6W3 641 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 SYNPO2Q9UMS6 1093 aa8.33□□□□□ -1.08
APOB-201ENST00000233242 TMEM94Q12767 1356 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.32□□□□□ -1.08
APOB-201ENST00000233242 A0A0B4J269 797 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 ITGB3P05106 788 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 ICAM1P05362 532 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 MGAT1P26572 445 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 SDC2P34741 201 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 ABATP80404 500 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 ZNF177Q13360 481 aaPredicted RBP8.32□□□□□ -1.08
APOB-201ENST00000233242 GNA13Q14344 377 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 PSMD5Q16401 504 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 C10orf120Q5SQS8 335 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 CXXC5Q7LFL8 322 aaKnown RBP8.32□□□□□ -1.08
APOB-201ENST00000233242 TDRPQ86YL5 185 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 DQX1Q8TE96 717 aaKnown RBP8.32□□□□□ -1.08
APOB-201ENST00000233242 MAGEE1Q9HCI5 957 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 SCUBE2Q9NQ36 999 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 TMED5Q9Y3A6 229 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 HNMTP50135 292 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 CLCN5P51795 746 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 DDX39BQ13838 428 aaKnown RBP8.32□□□□□ -1.08
APOB-201ENST00000233242 BAATQ14032 418 aaPredicted RBP8.32□□□□□ -1.08
APOB-201ENST00000233242 GALNT18Q6P9A2 607 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 SPESP1Q6UW49 350 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 PGAM4Q8N0Y7 254 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 STAG3L4Q8TBR4 150 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 EPS8L1Q8TE68 723 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 YTHDF1Q9BYJ9 559 aaKnown RBP8.32□□□□□ -1.08
APOB-201ENST00000233242 SRP68Q9UHB9 627 aaKnown RBP8.32□□□□□ -1.08
APOB-201ENST00000233242 CDH22Q9UJ99 828 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 PLLPQ9Y342 182 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 FSCN1Q16658 493 aaKnown RBP8.32□□□□□ -1.08
APOB-201ENST00000233242 STRIP1Q5VSL9 837 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 NEPROQ6NW34 567 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 ZCCHC23Q6ZST2 131 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 GPSM1Q86YR5 675 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 IFRD1O00458 451 aaPredicted RBP8.32□□□□□ -1.08
APOB-201ENST00000233242 GH1P01241 217 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 SERPINF2P08697 491 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 PPIBP23284 216 aaKnown RBP8.32□□□□□ -1.08
APOB-201ENST00000233242 UBAP2LQ14157 1087 aaKnown RBP8.32□□□□□ -1.08
APOB-201ENST00000233242 MTX3Q5HYI7 312 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 TPD52L3Q96J77 140 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 ANKHQ9HCJ1 492 aa8.32□□□□□ -1.08
APOB-201ENST00000233242 SMPD3Q9NY59 655 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms