RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 ESCO2Q56NI9 601 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 DACT2Q5SW24 774 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 GJB7Q6PEY0 223 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 RNF111Q6ZNA4 994 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 LHFPL2Q6ZUX7 228 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 ZNF354CQ86Y25 554 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 CAMK1DQ8IU85 385 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 HERC6Q8IVU3 1022 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 SRRM1Q8IYB3 904 aaKnown RBP5.8□□□□□ -1.48
RFX4-201ENST00000229387 JPH3Q8WXH2 748 aaPredicted RBP5.8□□□□□ -1.48
RFX4-201ENST00000229387 LPGAT1Q92604 370 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 ZDHHC16Q969W1 377 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 MARC2Q969Z3 335 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 TTC25Q96NG3 672 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 SLC6A17Q9H1V8 727 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 RPF2Q9H7B2 306 aaKnown RBP5.8□□□□□ -1.48
RFX4-201ENST00000229387 NPAP1Q9NZP6 1156 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 CEP72Q9P209 647 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 CHORDC1Q9UHD1 332 aaPredicted RBP5.8□□□□□ -1.48
RFX4-201ENST00000229387 ADAMTS1Q9UHI8 967 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 PCOLCE2Q9UKZ9 415 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 STRIP2Q9ULQ0 834 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 HCN4Q9Y3Q4 1203 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 CORINQ9Y5Q5 1042 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 BTAF1O14981 1849 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 NRAPQ86VF7 1730 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 CYP3A7-CYP3A51PA0A087WV96 503 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 SSU72P8A0A1W2PR75 194 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 ZNF98A6NK75 572 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 EML1O00423 815 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 TXNDC9O14530 226 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 MEIS2O14770 477 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 TBX3O15119 743 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 AXIN1O15169 862 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 DYNC1LI2O43237 492 aaPredicted RBP5.8□□□□□ -1.48
RFX4-201ENST00000229387 ZBTB7AO95365 584 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 VNN1O95497 513 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 CRTAMO95727 393 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 ITGB1P05556 798 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 CYP3A7P24462 503 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 NMT1P30419 496 aaKnown RBP5.8□□□□□ -1.48
RFX4-201ENST00000229387 HOXA6P31267 233 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 HTR7P34969 479 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 AP1S2P56377 157 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 MYL6P60660 151 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 ESRRGP62508 458 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 LRRC74AQ0VAA2 488 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 NFX1Q12986 1120 aaKnown RBP5.8□□□□□ -1.48
RFX4-201ENST00000229387 BAMBIQ13145 260 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 SPARCL1Q14515 664 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 RFTN1Q14699 578 aaPredicted RBP5.8□□□□□ -1.48
RFX4-201ENST00000229387 PDK4Q16654 411 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 FAM26FQ5R3K3 315 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 VARS2Q5ST30 1063 aaKnown RBP5.8□□□□□ -1.48
RFX4-201ENST00000229387 ZNF618Q5T7W0 954 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 UBE2UQ5VVX9 321 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 LPCAT4Q643R3 524 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 CNNM4Q6P4Q7 775 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 CYP20A1Q6UW02 462 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 TRMT10CQ7L0Y3 403 aaKnown RBP5.8□□□□□ -1.48
RFX4-201ENST00000229387 CATSPER3Q86XQ3 398 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 ULK2Q8IYT8 1036 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 LRRC71Q8N4P6 559 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 DAGLBQ8NCG7 672 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 MGARPQ8TDB4 240 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 TANKQ92844 425 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 NKD2Q969F2 451 aaPredicted RBP5.8□□□□□ -1.48
RFX4-201ENST00000229387 ZSCAN5AQ9BUG6 496 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 TRIM31Q9BZY9 425 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 ACAD9Q9H845 621 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 FAM105AQ9NUU6 356 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 PARVAQ9NVD7 372 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 ARHGAP20Q9P2F6 1191 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 EBF1Q9UH73 591 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 DBR1Q9UK59 544 aaKnown RBP5.8□□□□□ -1.48
RFX4-201ENST00000229387 CNOT11Q9UKZ1 510 aaKnown RBP5.8□□□□□ -1.48
RFX4-201ENST00000229387 DTNAQ9Y4J8 743 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 ASTN2O75129 1339 aaPredicted RBP5.8□□□□□ -1.48
RFX4-201ENST00000229387 ROBO3Q96MS0 1386 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 TIAM2Q8IVF5 1701 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 WDR91A4D1P6 747 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 TISP43B9A030 160 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 PLK4O00444 970 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 E2F3O00716 465 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 RAD51BO15315 384 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 LRRN2O75325 713 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 PTP4A3O75365 173 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 PALMO75781 387 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 KRT13P13646 458 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 SELLP14151 372 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 BRAFP15056 766 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 PEX2P28328 305 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 CASP4P49662 377 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 NLRP11P59045 1033 aaKnown RBP5.8□□□□□ -1.48
RFX4-201ENST00000229387 ERVK-21P61565 698 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 RAC1P63000 192 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 CSTF3Q12996 717 aaKnown RBP5.8□□□□□ -1.48
RFX4-201ENST00000229387 VWA5B1Q5TIE3 1220 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 UGT3A1Q6NUS8 523 aa5.8□□□□□ -1.48
RFX4-201ENST00000229387 FOXJ1Q92949 421 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms