RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 RSPH14Q9UHP6 348 aa10.9□□□□□ -0.66
CDCA3-201ENST00000229265 SSX2IPQ9Y2D8 614 aa10.9□□□□□ -0.66
CDCA3-201ENST00000229265 HBS1LQ9Y450 684 aaKnown RBP10.9□□□□□ -0.66
CDCA3-201ENST00000229265 COL4A2P08572 1712 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 IGLV3-10A0A075B6K4 115 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 CCDC195A0A1B0GUA6 201 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 GOLGA6L7A0A1B0GV03 622 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 TCRBV9S1A1TA0A576 114 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 TMEM221A6NGB7 291 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 FAM159BA6NKW6 160 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 GOLGA8MH3BSY2 632 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 M0R296 226 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 RNF103O00237 685 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 PI15O43692 258 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 TYROBPO43914 113 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 ASMTLO95671 621 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 AP2A1O95782 977 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 CPP00450 1065 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 SRGAP2BP0DMP2 458 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 RHOQP17081 205 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 PGAM1P18669 254 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 DRD4P21917 467 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 HADHAP40939 763 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 HNRNPDQ14103 355 aaKnown RBP10.89□□□□□ -0.67
CDCA3-201ENST00000229265 FASTKD3Q14CZ7 662 aaKnown RBP10.89□□□□□ -0.67
CDCA3-201ENST00000229265 TRIP4Q15650 581 aaPredicted RBP10.89□□□□□ -0.67
CDCA3-201ENST00000229265 SKIDA1Q1XH10 827 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 C5orf22Q49AR2 442 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 SPANXN3Q5MJ09 141 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 KCTD11Q693B1 232 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 NAPEPLDQ6IQ20 393 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 TRIM67Q6ZTA4 783 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 CEP57Q86XR8 500 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 ANKMY2Q8IV38 441 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 SCN4BQ8IWT1 228 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 TRIM42Q8IWZ5 723 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 CACNA2D3Q8IZS8 1091 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 ZNF567Q8N184 647 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 TTC9BQ8N6N2 239 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 GBP7Q8N8V2 638 aaPredicted RBP10.89□□□□□ -0.67
CDCA3-201ENST00000229265 KREMEN2Q8NCW0 462 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 SCAMP5Q8TAC9 235 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 ITFG1Q8TB96 612 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 ZSCAN18Q8TBC5 510 aaPredicted RBP10.89□□□□□ -0.67
CDCA3-201ENST00000229265 MDM1Q8TC05 714 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 PTCD2Q8WV60 388 aaKnown RBP10.89□□□□□ -0.67
CDCA3-201ENST00000229265 EDEM1Q92611 657 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 STAMBPL1Q96FJ0 436 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 CABS1Q96KC9 395 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 FCRL2Q96LA5 508 aaPredicted RBP10.89□□□□□ -0.67
CDCA3-201ENST00000229265 FCRL5Q96RD9 977 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 LGMNQ99538 433 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 IL12RB2Q99665 862 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 KDM4CQ9H3R0 1056 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 LRRC40Q9H9A6 602 aa10.89□□□□□ -0.67
CDCA3-201ENST00000229265 MRPL17Q9NRX2 175 aaKnown RBP10.89□□□□□ -0.67
CDCA3-201ENST00000229265 DNAJC17Q9NVM6 304 aaKnown RBP10.89□□□□□ -0.67
CDCA3-201ENST00000229265 ERICH4A6NGS2 130 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 SHISA7A6NL88 538 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 SMIM23A6NLE4 172 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 PRR33A8MZF0 331 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 FAM72CH0Y354 149 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 MFSD11O43934 449 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 PAGE1O75459 146 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 IL1BP01584 269 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 C1QAP02745 245 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 URODP06132 367 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 OR4Q2P0C623 313 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 PTPN3P26045 913 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 CCT5P48643 541 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 RENBPP51606 427 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 SEC24CP53992 1094 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 TBX4P57082 545 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 CREMQ03060 361 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 TCF15Q12870 199 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 LAMB3Q13751 1172 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 SEPT7Q16181 437 aaKnown RBP10.88□□□□□ -0.67
CDCA3-201ENST00000229265 INSCQ1MX18 579 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 SLC5A9Q2M3M2 681 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 FAM72AQ5TYM5 149 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 FAM72DQ6L9T8 149 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 TMEM135Q86UB9 458 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 LCA5Q86VQ0 697 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 FAM72BQ86X60 149 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 SRRM1Q8IYB3 904 aaKnown RBP10.88□□□□□ -0.67
CDCA3-201ENST00000229265 RTL3Q8N8U3 475 aaKnown RBP10.88□□□□□ -0.67
CDCA3-201ENST00000229265 BANPQ8N9N5 519 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 CCDC197Q8NCU1 140 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 GABPB2Q8TAK5 448 aaPredicted RBP10.88□□□□□ -0.67
CDCA3-201ENST00000229265 RAB3IL1Q8TBN0 382 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 ZNF398Q8TD17 642 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 MZB1Q8WU39 189 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 SEC16BQ96JE7 1060 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 MYRFLQ96LU7 910 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 PRMT1Q99873 361 aaKnown RBP10.88□□□□□ -0.67
CDCA3-201ENST00000229265 C1QTNF1Q9BXJ1 281 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 MAGEB5Q9BZ81 275 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 IL22Q9GZX6 179 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 GBA3Q9H227 469 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 CASS4Q9NQ75 786 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms