RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 RMND5BQ96G75 393 aaPredicted RBP11.72□□□□□ -0.53
CCND1-201ENST00000227507 BTBD9Q96Q07 612 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 NDEL1Q9GZM8 345 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 DRC3Q9H069 523 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 USP18Q9UMW8 372 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 HES2Q9Y543 173 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 WDR27A2RRH5 827 aa11.71□□□□□ -0.53
CCND1-201ENST00000227507 GPC4O75487 556 aa11.71□□□□□ -0.53
CCND1-201ENST00000227507 CPA3P15088 417 aa11.71□□□□□ -0.53
CCND1-201ENST00000227507 ARL1P40616 181 aaPredicted RBP11.71□□□□□ -0.53
CCND1-201ENST00000227507 IDH3AP50213 366 aa11.71□□□□□ -0.53
CCND1-201ENST00000227507 SLC18A2Q05940 514 aa11.71□□□□□ -0.53
CCND1-201ENST00000227507 ANO4Q32M45 955 aa11.71□□□□□ -0.53
CCND1-201ENST00000227507 OVOS1Q6IE37 1185 aa11.71□□□□□ -0.53
CCND1-201ENST00000227507 RNF111Q6ZNA4 994 aa11.71□□□□□ -0.53
CCND1-201ENST00000227507 CMC1Q7Z7K0 106 aa11.71□□□□□ -0.53
CCND1-201ENST00000227507 ZNF276Q8N554 614 aa11.71□□□□□ -0.53
CCND1-201ENST00000227507 METTL25Q8N6Q8 603 aa11.71□□□□□ -0.53
CCND1-201ENST00000227507 SIK2Q9H0K1 926 aa11.71□□□□□ -0.53
CCND1-201ENST00000227507 PLEKHA5Q9HAU0 1116 aa11.71□□□□□ -0.53
CCND1-201ENST00000227507 IL1RL2Q9HB29 575 aa11.71□□□□□ -0.53
CCND1-201ENST00000227507 HSFX1Q9UBD0 423 aa11.71□□□□□ -0.53
CCND1-201ENST00000227507 PGAP2Q9UHJ9 254 aa11.71□□□□□ -0.53
CCND1-201ENST00000227507 SPTLC1O15269 473 aa11.71□□□□□ -0.53
CCND1-201ENST00000227507 B4GALT5O43286 388 aa11.71□□□□□ -0.53
CCND1-201ENST00000227507 SLC5A2P31639 672 aa11.71□□□□□ -0.53
CCND1-201ENST00000227507 ACLYP53396 1101 aa11.71□□□□□ -0.53
CCND1-201ENST00000227507 CACNB2Q08289 660 aaPredicted RBP11.71□□□□□ -0.53
CCND1-201ENST00000227507 KLF10Q13118 480 aa11.71□□□□□ -0.53
CCND1-201ENST00000227507 GEN1Q17RS7 908 aa11.71□□□□□ -0.53
CCND1-201ENST00000227507 C16orf89Q6UX73 402 aa11.71□□□□□ -0.53
CCND1-201ENST00000227507 UNC5AQ6ZN44 842 aa11.71□□□□□ -0.53
CCND1-201ENST00000227507 BBS12Q6ZW61 710 aa11.71□□□□□ -0.53
CCND1-201ENST00000227507 CTU1Q7Z7A3 348 aaKnown RBP11.71□□□□□ -0.53
CCND1-201ENST00000227507 PHF13Q86YI8 300 aaPredicted RBP11.71□□□□□ -0.53
CCND1-201ENST00000227507 GAB3Q8WWW8 586 aa11.71□□□□□ -0.53
CCND1-201ENST00000227507 SGF29Q96ES7 293 aa11.71□□□□□ -0.53
CCND1-201ENST00000227507 VCPIP1Q96JH7 1222 aa11.71□□□□□ -0.53
CCND1-201ENST00000227507 SEZ6LQ9BYH1 1024 aa11.71□□□□□ -0.53
CCND1-201ENST00000227507 COG4Q9H9E3 785 aa11.71□□□□□ -0.53
CCND1-201ENST00000227507 SDR42E2A6NKP2 422 aa11.71□□□□□ -0.54
CCND1-201ENST00000227507 LRCH4O75427 683 aa11.71□□□□□ -0.54
CCND1-201ENST00000227507 THRAP10827 490 aa11.71□□□□□ -0.54
CCND1-201ENST00000227507 GJA5P36382 358 aa11.71□□□□□ -0.54
CCND1-201ENST00000227507 GRIA1P42261 906 aa11.71□□□□□ -0.54
CCND1-201ENST00000227507 SCNN1GP51170 649 aa11.71□□□□□ -0.54
CCND1-201ENST00000227507 THOP1P52888 689 aa11.71□□□□□ -0.54
CCND1-201ENST00000227507 CDH8P55286 799 aa11.71□□□□□ -0.54
CCND1-201ENST00000227507 YWHAZP63104 245 aaKnown RBP11.71□□□□□ -0.54
CCND1-201ENST00000227507 MRPS5P82675 430 aaKnown RBP11.71□□□□□ -0.54
CCND1-201ENST00000227507 YWHAHQ04917 246 aaPredicted RBP11.71□□□□□ -0.54
CCND1-201ENST00000227507 PDAP1Q13442 181 aaKnown RBP11.71□□□□□ -0.54
CCND1-201ENST00000227507 PDZD8Q8NEN9 1154 aa11.71□□□□□ -0.54
CCND1-201ENST00000227507 CIB1Q99828 191 aa11.71□□□□□ -0.54
CCND1-201ENST00000227507 MRPL46Q9H2W6 279 aaKnown RBP11.71□□□□□ -0.54
CCND1-201ENST00000227507 FARP1Q9Y4F1 1045 aaPredicted RBP11.71□□□□□ -0.54
CCND1-201ENST00000227507 C1orf232A0A0U1RR37 186 aa11.7□□□□□ -0.54
CCND1-201ENST00000227507 ATP9BO43861 1147 aa11.7□□□□□ -0.54
CCND1-201ENST00000227507 SELPP16109 830 aa11.7□□□□□ -0.54
CCND1-201ENST00000227507 RPL10P27635 214 aaKnown RBP11.7□□□□□ -0.54
CCND1-201ENST00000227507 TPD52P55327 224 aaPredicted RBP11.7□□□□□ -0.54
CCND1-201ENST00000227507 PTPN11Q06124 597 aaPredicted RBP11.7□□□□□ -0.54
CCND1-201ENST00000227507 C15orf59Q2T9L4 293 aaPredicted RBP11.7□□□□□ -0.54
CCND1-201ENST00000227507 ZBTB49Q6ZSB9 765 aa11.7□□□□□ -0.54
CCND1-201ENST00000227507 PDCD6IPQ8WUM4 868 aaKnown RBP11.7□□□□□ -0.54
CCND1-201ENST00000227507 SLC4A5Q9BY07 1137 aa11.7□□□□□ -0.54
CCND1-201ENST00000227507 CHST12Q9NRB3 414 aa11.7□□□□□ -0.54
CCND1-201ENST00000227507 MRGBPQ9NV56 204 aa11.7□□□□□ -0.54
CCND1-201ENST00000227507 TRNAU1APQ9NX07 287 aaKnown RBP11.7□□□□□ -0.54
CCND1-201ENST00000227507 WARS2Q9UGM6 360 aaKnown RBP11.7□□□□□ -0.54
CCND1-201ENST00000227507 MYRFQ9Y2G1 1151 aa11.7□□□□□ -0.54
CCND1-201ENST00000227507 CARNS1A5YM72 827 aa11.7□□□□□ -0.54
CCND1-201ENST00000227507 APOC4-APOC2K7ER74 178 aa11.7□□□□□ -0.54
CCND1-201ENST00000227507 DHX15O43143 795 aaKnown RBP11.7□□□□□ -0.54
CCND1-201ENST00000227507 APOC2P02655 101 aa11.7□□□□□ -0.54
CCND1-201ENST00000227507 MAP4P27816 1152 aaKnown RBP11.7□□□□□ -0.54
CCND1-201ENST00000227507 C21orf59P57076 290 aa11.7□□□□□ -0.54
CCND1-201ENST00000227507 NEDD8Q15843 81 aa11.7□□□□□ -0.54
CCND1-201ENST00000227507 ZACNQ401N2 412 aa11.7□□□□□ -0.54
CCND1-201ENST00000227507 THOC7Q6I9Y2 204 aaKnown RBP11.7□□□□□ -0.54
CCND1-201ENST00000227507 DENND1BQ6P3S1 775 aa11.7□□□□□ -0.54
CCND1-201ENST00000227507 XKR5Q6UX68 686 aa11.7□□□□□ -0.54
CCND1-201ENST00000227507 ZNF296Q8WUU4 475 aaPredicted RBP11.7□□□□□ -0.54
CCND1-201ENST00000227507 TFB1MQ8WVM0 346 aaKnown RBP11.7□□□□□ -0.54
CCND1-201ENST00000227507 CRYGNQ8WXF5 182 aa11.7□□□□□ -0.54
CCND1-201ENST00000227507 PKP2Q99959 881 aa11.7□□□□□ -0.54
CCND1-201ENST00000227507 WDR83Q9BRX9 315 aaKnown RBP11.7□□□□□ -0.54
CCND1-201ENST00000227507 ENTPD7Q9NQZ7 604 aa11.7□□□□□ -0.54
CCND1-201ENST00000227507 GTSE1Q9NYZ3 720 aa11.7□□□□□ -0.54
CCND1-201ENST00000227507 C6orf203Q9P0P8 240 aaPredicted RBP11.7□□□□□ -0.54
CCND1-201ENST00000227507 COQ4Q9Y3A0 265 aa11.7□□□□□ -0.54
CCND1-201ENST00000227507 PARNO95453 639 aaKnown RBP11.7□□□□□ -0.54
CCND1-201ENST00000227507 LRG1P02750 347 aa11.7□□□□□ -0.54
CCND1-201ENST00000227507 DHRS4L1P0CG22 281 aa11.7□□□□□ -0.54
CCND1-201ENST00000227507 AOC1P19801 751 aa11.7□□□□□ -0.54
CCND1-201ENST00000227507 ACO1P21399 889 aaKnown RBP11.7□□□□□ -0.54
CCND1-201ENST00000227507 ARL2P36404 184 aa11.7□□□□□ -0.54
CCND1-201ENST00000227507 GARSP41250 739 aaKnown RBP11.7□□□□□ -0.54
CCND1-201ENST00000227507 PTK2BQ14289 1009 aa11.7□□□□□ -0.54
CCND1-201ENST00000227507 GPR107Q5VW38 600 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms