RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 AGAP3Q96P47 875 aa22.62■■□□□ 1.21
CCDC9-201ENST00000221922 GORASP1Q9BQQ3 440 aa22.62■■□□□ 1.21
CCDC9-201ENST00000221922 OSBPL2Q9H1P3 480 aa22.62■■□□□ 1.21
CCDC9-201ENST00000221922 SLC24A3Q9HC58 644 aa22.62■■□□□ 1.21
CCDC9-201ENST00000221922 MAGEB16A2A368 324 aa22.61■■□□□ 1.21
CCDC9-201ENST00000221922 ZBTB24O43167 697 aaPredicted RBP22.61■■□□□ 1.21
CCDC9-201ENST00000221922 USP1O94782 785 aa22.61■■□□□ 1.21
CCDC9-201ENST00000221922 MYL4P12829 197 aa22.61■■□□□ 1.21
CCDC9-201ENST00000221922 MXRA7P84157 204 aa22.61■■□□□ 1.21
CCDC9-201ENST00000221922 TSPY1Q01534 308 aa22.61■■□□□ 1.21
CCDC9-201ENST00000221922 C1orf146Q5VVC0 180 aa22.61■■□□□ 1.21
CCDC9-201ENST00000221922 OR52E8Q6IFG1 317 aa22.61■■□□□ 1.21
CCDC9-201ENST00000221922 MAVSQ7Z434 540 aa22.61■■□□□ 1.21
CCDC9-201ENST00000221922 LRRTM3Q86VH5 581 aa22.61■■□□□ 1.21
CCDC9-201ENST00000221922 DNAAF3Q8N9W5 541 aa22.61■■□□□ 1.21
CCDC9-201ENST00000221922 GATA6Q92908 595 aa22.61■■□□□ 1.21
CCDC9-201ENST00000221922 ASB3Q9Y575 518 aa22.61■■□□□ 1.21
CCDC9-201ENST00000221922 MOXD2PA6NHM9 499 aa22.61■■□□□ 1.21
CCDC9-201ENST00000221922 UPP2O95045 317 aa22.61■■□□□ 1.21
CCDC9-201ENST00000221922 EOMESO95936 686 aa22.61■■□□□ 1.21
CCDC9-201ENST00000221922 ITGB1P05556 798 aa22.61■■□□□ 1.21
CCDC9-201ENST00000221922 CKBP12277 381 aa22.61■■□□□ 1.21
CCDC9-201ENST00000221922 NPY2RP49146 381 aa22.61■■□□□ 1.21
CCDC9-201ENST00000221922 IRX1P78414 480 aaPredicted RBP22.61■■□□□ 1.21
CCDC9-201ENST00000221922 PRPSAP1Q14558 356 aa22.61■■□□□ 1.21
CCDC9-201ENST00000221922 ATG14Q6ZNE5 492 aa22.61■■□□□ 1.21
CCDC9-201ENST00000221922 TMEM135Q86UB9 458 aa22.61■■□□□ 1.21
CCDC9-201ENST00000221922 C10orf107Q8IVU9 208 aa22.61■■□□□ 1.21
CCDC9-201ENST00000221922 DQX1Q8TE96 717 aaKnown RBP22.61■■□□□ 1.21
CCDC9-201ENST00000221922 ISL2Q96A47 359 aa22.61■■□□□ 1.21
CCDC9-201ENST00000221922 ZNF669Q96BR6 464 aaPredicted RBP22.61■■□□□ 1.21
CCDC9-201ENST00000221922 YIPF3Q9GZM5 350 aa22.61■■□□□ 1.21
CCDC9-201ENST00000221922 DLGAP2Q9P1A6 1054 aa22.61■■□□□ 1.21
CCDC9-201ENST00000221922 COPG2Q9UBF2 871 aa22.61■■□□□ 1.21
CCDC9-201ENST00000221922 SCOCQ9UIL1 159 aa22.61■■□□□ 1.21
CCDC9-201ENST00000221922 PCDHB8Q9UN66 801 aa22.61■■□□□ 1.21
CCDC9-201ENST00000221922 ZNF195O14628 629 aa22.6■■□□□ 1.21
CCDC9-201ENST00000221922 PSMD3O43242 534 aa22.6■■□□□ 1.21
CCDC9-201ENST00000221922 SIN3BO75182 1162 aa22.6■■□□□ 1.21
CCDC9-201ENST00000221922 FKBP6O75344 327 aa22.6■■□□□ 1.21
CCDC9-201ENST00000221922 ERVK-10P10266 1014 aa22.6■■□□□ 1.21
CCDC9-201ENST00000221922 CD68P34810 354 aaPredicted RBP22.6■■□□□ 1.21
CCDC9-201ENST00000221922 HARS2P49590 506 aaKnown RBP22.6■■□□□ 1.21
CCDC9-201ENST00000221922 IDH3AP50213 366 aa22.6■■□□□ 1.21
CCDC9-201ENST00000221922 GSTA3Q16772 222 aa22.6■■□□□ 1.21
CCDC9-201ENST00000221922 AAGABQ6PD74 315 aa22.6■■□□□ 1.21
CCDC9-201ENST00000221922 TRAF7Q6Q0C0 670 aa22.6■■□□□ 1.21
CCDC9-201ENST00000221922 GLB1LQ6UWU2 654 aa22.6■■□□□ 1.21
CCDC9-201ENST00000221922 ADGRG6Q86SQ4 1221 aa22.6■■□□□ 1.21
CCDC9-201ENST00000221922 OR6Y1Q8NGX8 325 aa22.6■■□□□ 1.21
CCDC9-201ENST00000221922 PPP4R1Q8TF05 950 aa22.6■■□□□ 1.21
CCDC9-201ENST00000221922 GLT1D1Q96MS3 346 aa22.6■■□□□ 1.21
CCDC9-201ENST00000221922 TMEM209Q96SK2 561 aa22.6■■□□□ 1.21
CCDC9-201ENST00000221922 YY1P25490 414 aa22.59■■□□□ 1.21
CCDC9-201ENST00000221922 DNAJB2P25686 324 aa22.59■■□□□ 1.21
CCDC9-201ENST00000221922 HOXD10P28358 340 aa22.59■■□□□ 1.21
CCDC9-201ENST00000221922 SPRP35270 261 aaPredicted RBP22.59■■□□□ 1.21
CCDC9-201ENST00000221922 MAGEA12P43365 314 aa22.59■■□□□ 1.21
CCDC9-201ENST00000221922 ZBTB17Q13105 803 aa22.59■■□□□ 1.21
CCDC9-201ENST00000221922 REM2Q8IYK8 340 aaPredicted RBP22.59■■□□□ 1.21
CCDC9-201ENST00000221922 IFT43Q96FT9 208 aa22.59■■□□□ 1.21
CCDC9-201ENST00000221922 TEKT5Q96M29 485 aa22.59■■□□□ 1.21
CCDC9-201ENST00000221922 TMEM216Q9P0N5 145 aa22.59■■□□□ 1.21
CCDC9-201ENST00000221922 ARHGAP42A6NI28 874 aa22.59■■□□□ 1.21
CCDC9-201ENST00000221922 AOC2O75106 756 aa22.59■■□□□ 1.21
CCDC9-201ENST00000221922 IGLV3-25P01717 112 aa22.59■■□□□ 1.21
CCDC9-201ENST00000221922 NFKB1P19838 968 aa22.59■■□□□ 1.21
CCDC9-201ENST00000221922 TYK2P29597 1187 aa22.59■■□□□ 1.21
CCDC9-201ENST00000221922 ARRB2P32121 409 aa22.59■■□□□ 1.21
CCDC9-201ENST00000221922 HTR7P34969 479 aa22.59■■□□□ 1.21
CCDC9-201ENST00000221922 PPM1JQ5JR12 505 aa22.59■■□□□ 1.21
CCDC9-201ENST00000221922 BRMS1LQ5PSV4 323 aa22.59■■□□□ 1.21
CCDC9-201ENST00000221922 CES3Q6UWW8 571 aa22.59■■□□□ 1.21
CCDC9-201ENST00000221922 SLC24A5Q71RS6 500 aa22.59■■□□□ 1.21
CCDC9-201ENST00000221922 FCRL3Q96P31 734 aaPredicted RBP22.59■■□□□ 1.21
CCDC9-201ENST00000221922 RBBP8Q99708 897 aa22.59■■□□□ 1.21
CCDC9-201ENST00000221922 MLPHQ9BV36 600 aaPredicted RBP22.59■■□□□ 1.21
CCDC9-201ENST00000221922 IL22Q9GZX6 179 aa22.59■■□□□ 1.21
CCDC9-201ENST00000221922 PNPOQ9NVS9 261 aa22.59■■□□□ 1.21
CCDC9-201ENST00000221922 NDE1Q9NXR1 346 aa22.59■■□□□ 1.21
CCDC9-201ENST00000221922 SNX10Q9Y5X0 201 aa22.59■■□□□ 1.21
CCDC9-201ENST00000221922 CENPFP49454 3210 aa22.59■■□□□ 1.21
CCDC9-201ENST00000221922 MAGEA13PA6NCF6 341 aa22.58■■□□□ 1.21
CCDC9-201ENST00000221922 USP12O75317 370 aa22.58■■□□□ 1.21
CCDC9-201ENST00000221922 CRABP2P29373 138 aa22.58■■□□□ 1.21
CCDC9-201ENST00000221922 SERPINB8P50452 374 aa22.58■■□□□ 1.21
CCDC9-201ENST00000221922 ABCE1P61221 599 aaKnown RBP22.58■■□□□ 1.21
CCDC9-201ENST00000221922 DSC1Q08554 894 aa22.58■■□□□ 1.21
CCDC9-201ENST00000221922 ANKRD20A4Q4UJ75 823 aa22.58■■□□□ 1.21
CCDC9-201ENST00000221922 NAPEPLDQ6IQ20 393 aa22.58■■□□□ 1.21
CCDC9-201ENST00000221922 RTN4RL1Q86UN2 441 aaPredicted RBP22.58■■□□□ 1.21
CCDC9-201ENST00000221922 NR1H4Q96RI1 486 aaPredicted RBP22.58■■□□□ 1.21
CCDC9-201ENST00000221922 TSEN34Q9BSV6 310 aaKnown RBP22.58■■□□□ 1.21
CCDC9-201ENST00000221922 MEI4A8MW99 385 aa22.58■■□□□ 1.2
CCDC9-201ENST00000221922 CCNT2O60583 730 aaKnown RBP22.58■■□□□ 1.2
CCDC9-201ENST00000221922 RALBP11234 206 aa22.58■■□□□ 1.2
CCDC9-201ENST00000221922 COPAP53621 1224 aa22.58■■□□□ 1.2
CCDC9-201ENST00000221922 SLC25A3Q00325 362 aa22.58■■□□□ 1.2
CCDC9-201ENST00000221922 YWHAHQ04917 246 aaPredicted RBP22.58■■□□□ 1.2
CCDC9-201ENST00000221922 BTKQ06187 659 aa22.58■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms