RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 MMP13P45452 471 aa11.23□□□□□ -0.61
USP31-201ENST00000219689 RGS4P49798 205 aa11.23□□□□□ -0.61
USP31-201ENST00000219689 SKIV2LQ15477 1246 aaKnown RBP11.23□□□□□ -0.61
USP31-201ENST00000219689 ANO7Q6IWH7 933 aa11.23□□□□□ -0.61
USP31-201ENST00000219689 CENPSQ8N2Z9 138 aa11.23□□□□□ -0.61
USP31-201ENST00000219689 TMEM47Q9BQJ4 181 aa11.23□□□□□ -0.61
USP31-201ENST00000219689 GNG14A0A1W2PPG7 69 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 TRIM38O00635 465 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 ECDO95905 644 aaPredicted RBP11.22□□□□□ -0.61
USP31-201ENST00000219689 ING5Q8WYH8 240 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 C18orf25Q96B23 403 aaPredicted RBP11.22□□□□□ -0.61
USP31-201ENST00000219689 ERGIC3Q9Y282 383 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 XDHP47989 1333 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 DLGAP5Q15398 846 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 DOK7Q18PE1 504 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 GRTP1Q5TC63 336 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 NT5DC3Q86UY8 548 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 MOSPD2Q8NHP6 518 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 A0A0G2JLW4 131 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 SNRPB2P08579 225 aaKnown RBP11.22□□□□□ -0.61
USP31-201ENST00000219689 TIGD7Q6NT04 549 aaPredicted RBP11.22□□□□□ -0.61
USP31-201ENST00000219689 CLHC1Q8NHS4 586 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 PCDH9Q9HC56 1237 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 PCDH18Q9HCL0 1135 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 VANGL2Q9ULK5 521 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 VPS9D1Q9Y2B5 631 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 FOXO6A8MYZ6 492 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 CYP11B1P15538 503 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 CCNG2Q16589 344 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 HPS6Q86YV9 775 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 TTC39CQ8N584 583 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 TBC1D19Q8N5T2 526 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 SH3BP4Q9P0V3 963 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 SLAIN2Q9P270 581 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 INVSQ9Y283 1065 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 FADS3Q9Y5Q0 445 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 TNRQ92752 1358 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 PKDREJQ9NTG1 2253 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 ISPDA4D126 451 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 AURKAO14965 403 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 TRIM3O75382 744 aaPredicted RBP11.22□□□□□ -0.61
USP31-201ENST00000219689 EYA4O95677 639 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 SERPINA1P01009 418 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 CHRM3P20309 590 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 RBM15BQ8NDT2 890 aaKnown RBP11.22□□□□□ -0.61
USP31-201ENST00000219689 CAPN10Q9HC96 672 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 ANKRD6Q9Y2G4 727 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 DHRS7Q9Y394 339 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 NCOR1O75376 2440 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 BCKDKO14874 412 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 NFICP08651 508 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 GOLGA7BQ2TAP0 167 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 CLNKQ7Z7G1 428 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 DSELQ8IZU8 1212 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 ZNF614Q8N883 585 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 UBA3Q8TBC4 463 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 IGDCC4Q8TDY8 1250 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 RTKNQ9BST9 563 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 TMEM8AQ9HCN3 771 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 COQ3Q9NZJ6 369 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 SUZ12Q15022 739 aaKnown RBP11.22□□□□□ -0.61
USP31-201ENST00000219689 NKX1-1Q15270 411 aaPredicted RBP11.22□□□□□ -0.61
USP31-201ENST00000219689 RBM20Q5T481 1227 aaKnown RBP11.22□□□□□ -0.61
USP31-201ENST00000219689 ADCK2Q7Z695 626 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 MCOLN3Q8TDD5 553 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 KIF12Q96FN5 646 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 MRPL9Q9BYD2 267 aaKnown RBP11.22□□□□□ -0.61
USP31-201ENST00000219689 VPS45Q9NRW7 570 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 PLATP00750 562 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 GCP02774 474 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 EXD1Q8NHP7 514 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 DIRAS2Q96HU8 199 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 FRMD8P1Q9BZ68 369 aaPredicted RBP11.22□□□□□ -0.61
USP31-201ENST00000219689 USP18Q9UMW8 372 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 RPH3AQ9Y2J0 694 aaPredicted RBP11.22□□□□□ -0.61
USP31-201ENST00000219689 PCDHB2Q9Y5E7 798 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 PKN1Q16512 942 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 PABPC5Q96DU9 382 aaKnown RBP11.22□□□□□ -0.61
USP31-201ENST00000219689 FAXDC2Q96IV6 333 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 DSN1Q9H410 356 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 SACM1LQ9NTJ5 587 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 ERVK-11Q9UQG0 969 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 CSADQ9Y600 493 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 TAF6LQ9Y6J9 622 aa11.22□□□□□ -0.61
USP31-201ENST00000219689 AP2A2O94973 939 aa11.21□□□□□ -0.61
USP31-201ENST00000219689 CDH1P12830 882 aa11.21□□□□□ -0.61
USP31-201ENST00000219689 MZF1P28698 734 aaPredicted RBP11.21□□□□□ -0.61
USP31-201ENST00000219689 HOXD12P35452 270 aa11.21□□□□□ -0.61
USP31-201ENST00000219689 AP2S1P53680 142 aaPredicted RBP11.21□□□□□ -0.61
USP31-201ENST00000219689 GNG2P59768 71 aa11.21□□□□□ -0.61
USP31-201ENST00000219689 INO80DQ53TQ3 878 aaPredicted RBP11.21□□□□□ -0.61
USP31-201ENST00000219689 PADI4Q9UM07 663 aa11.21□□□□□ -0.61
USP31-201ENST00000219689 PLEKHG3A1L390 1219 aa11.21□□□□□ -0.61
USP31-201ENST00000219689 BCLAF3A2AJT9 711 aaKnown RBP11.21□□□□□ -0.61
USP31-201ENST00000219689 TCEA3O75764 348 aa11.21□□□□□ -0.61
USP31-201ENST00000219689 KCNH1O95259 989 aa11.21□□□□□ -0.61
USP31-201ENST00000219689 HS6ST3Q8IZP7 471 aa11.21□□□□□ -0.61
USP31-201ENST00000219689 APOL2Q9BQE5 337 aa11.21□□□□□ -0.61
USP31-201ENST00000219689 SLC6A15Q9H2J7 730 aa11.21□□□□□ -0.61
USP31-201ENST00000219689 FAM86B1E9PN63 330 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms