RNA–Protein interactions for RNA: ENST00000173898.11

TRO-201, Transcript of trophinin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRO, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-201ENST00000173898 CAMKK2Q96RR4 588 aa12.19□□□□□ -0.46
TRO-201ENST00000173898 TBCDQ9BTW9 1192 aa12.19□□□□□ -0.46
TRO-201ENST00000173898 DNAJC5Q9H3Z4 198 aa12.19□□□□□ -0.46
TRO-201ENST00000173898 LRRC4CQ9HCJ2 640 aa12.19□□□□□ -0.46
TRO-201ENST00000173898 MYRFQ9Y2G1 1151 aa12.19□□□□□ -0.46
TRO-201ENST00000173898 TCRBV7S2A1N4TA0A589 114 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 MANSC4A6NHS7 340 aaPredicted RBP12.18□□□□□ -0.46
TRO-201ENST00000173898 PTGES3LE9PB15 166 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 HDAC3O15379 428 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 DDX3YO15523 660 aaKnown RBP12.18□□□□□ -0.46
TRO-201ENST00000173898 SH3BGRLO75368 114 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 TFEBP19484 476 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 MATKP42679 507 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 GRIA4P48058 902 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 GSSP48637 474 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 PTDSS1P48651 473 aaKnown RBP12.18□□□□□ -0.46
TRO-201ENST00000173898 HSDL1Q3SXM5 330 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 CRELD2Q6UXH1 353 aaPredicted RBP12.18□□□□□ -0.46
TRO-201ENST00000173898 CLVS1Q8IUQ0 354 aaPredicted RBP12.18□□□□□ -0.46
TRO-201ENST00000173898 EID3Q8N140 333 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 KRT78Q8N1N4 520 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 MTERF3Q96E29 417 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 CATSPERZQ9NTU4 200 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 OPTCQ9UBM4 332 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 ZNF112Q9UJU3 913 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 PEX1O43933 1283 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 EDF1O60869 148 aaKnown RBP12.18□□□□□ -0.46
TRO-201ENST00000173898 KRT36O76013 467 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 ATG7O95352 703 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 ATP5C1P36542 298 aaKnown RBP12.18□□□□□ -0.46
TRO-201ENST00000173898 NEK3P51956 506 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 ZDHHC13Q8IUH4 622 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 PTGR2Q8N8N7 351 aaPredicted RBP12.18□□□□□ -0.46
TRO-201ENST00000173898 KCTD4Q8WVF5 259 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 RNASEH1O60930 286 aaKnown RBP12.18□□□□□ -0.46
TRO-201ENST00000173898 PEX11AO75192 247 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 S100A3P33764 101 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 PPIDQ08752 370 aaKnown RBP12.18□□□□□ -0.46
TRO-201ENST00000173898 PPIL2Q13356 520 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 BTG3Q14201 252 aaPredicted RBP12.18□□□□□ -0.46
TRO-201ENST00000173898 QPCTQ16769 361 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 ITFG1Q8TB96 612 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 SOCS4Q8WXH5 440 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 C18orf25Q96B23 403 aaPredicted RBP12.18□□□□□ -0.46
TRO-201ENST00000173898 PANX3Q96QZ0 392 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 NDNQ99608 321 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 MECRQ9BV79 373 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 FBXO5Q9UKT4 447 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 TSC22D4Q9Y3Q8 395 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 SNX8Q9Y5X2 465 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 CLDN5O00501 218 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 SCAMP3O14828 347 aaKnown RBP12.18□□□□□ -0.46
TRO-201ENST00000173898 HS6ST1O60243 411 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 VPS4BO75351 444 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 FGFR1P11362 822 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 EML3Q32P44 896 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 FAM45BPQ6NSW5 357 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 ABHD15Q6UXT9 468 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 TMEM26Q6ZUK4 368 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 PIWIL4Q7Z3Z4 852 aaKnown RBP12.18□□□□□ -0.46
TRO-201ENST00000173898 CYP4Z1Q86W10 505 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 CPXM1Q96SM3 734 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 C9orf16Q9BUW7 83 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 B3GNT5Q9BYG0 378 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 ARL15Q9NXU5 204 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 RABGEF1Q9UJ41 708 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 ADAM28Q9UKQ2 775 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 CDH9Q9ULB4 789 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 SPACA6W5XKT8 324 aa12.18□□□□□ -0.46
TRO-201ENST00000173898 BCL10O95999 233 aa12.17□□□□□ -0.46
TRO-201ENST00000173898 OR56A5P0C7T3 313 aa12.17□□□□□ -0.46
TRO-201ENST00000173898 SMIM10L2AP0DMW4 78 aa12.17□□□□□ -0.46
TRO-201ENST00000173898 SMIM10L2BP0DMW5 78 aa12.17□□□□□ -0.46
TRO-201ENST00000173898 VCLP18206 1134 aa12.17□□□□□ -0.46
TRO-201ENST00000173898 SOX6P35712 828 aa12.17□□□□□ -0.46
TRO-201ENST00000173898 RPS7P62081 194 aaKnown RBP12.17□□□□□ -0.46
TRO-201ENST00000173898 CTBP1Q13363 440 aa12.17□□□□□ -0.46
TRO-201ENST00000173898 ZNF621Q6ZSS3 439 aa12.17□□□□□ -0.46
TRO-201ENST00000173898 FAM228AQ86W67 206 aa12.17□□□□□ -0.46
TRO-201ENST00000173898 HELQQ8TDG4 1101 aa12.17□□□□□ -0.46
TRO-201ENST00000173898 DLG3Q92796 817 aa12.17□□□□□ -0.46
TRO-201ENST00000173898 SERAC1Q96JX3 654 aa12.17□□□□□ -0.46
TRO-201ENST00000173898 MBOAT7Q96N66 472 aa12.17□□□□□ -0.46
TRO-201ENST00000173898 UGT2B28Q9BY64 529 aa12.17□□□□□ -0.46
TRO-201ENST00000173898 LRMDAQ9H2I8 198 aa12.17□□□□□ -0.46
TRO-201ENST00000173898 PCDH18Q9HCL0 1135 aa12.17□□□□□ -0.46
TRO-201ENST00000173898 COPG2Q9UBF2 871 aa12.17□□□□□ -0.46
TRO-201ENST00000173898 MORF4L1Q9UBU8 362 aa12.17□□□□□ -0.46
TRO-201ENST00000173898 CAB39Q9Y376 341 aaPredicted RBP12.17□□□□□ -0.46
TRO-201ENST00000173898 RIPK3Q9Y572 518 aa12.17□□□□□ -0.46
TRO-201ENST00000173898 IFRD1O00458 451 aaPredicted RBP12.17□□□□□ -0.46
TRO-201ENST00000173898 IGSF6O95976 241 aa12.17□□□□□ -0.46
TRO-201ENST00000173898 CST3P01034 146 aaPredicted RBP12.17□□□□□ -0.46
TRO-201ENST00000173898 COX4I1P13073 169 aa12.17□□□□□ -0.46
TRO-201ENST00000173898 TSPAN8P19075 237 aa12.17□□□□□ -0.46
TRO-201ENST00000173898 FGFR3P22607 806 aa12.17□□□□□ -0.46
TRO-201ENST00000173898 PAX7P23759 505 aa12.17□□□□□ -0.46
TRO-201ENST00000173898 CCDC92Q53HC0 331 aaPredicted RBP12.17□□□□□ -0.46
TRO-201ENST00000173898 C10orf53Q8N6V4 93 aa12.17□□□□□ -0.46
TRO-201ENST00000173898 LRRC52Q8N7C0 313 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms