RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 ZNF682O95780 498 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 GMPSP49915 693 aaPredicted RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 KCNJ2P63252 427 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 MKRN4PQ13434 485 aaPredicted RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 GALNTL6Q49A17 601 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 CBWD6Q4V339 395 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 PHF19Q5T6S3 580 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 C7orf61Q8IZ16 206 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 TSTD1Q8NFU3 115 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 AKAP1Q92667 903 aaKnown RBP eCLIP3.5□□□□□ -1.85
NEB-201ENST00000172853 FAM120BQ96EK7 910 aaKnown RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 TBC1D14Q9P2M4 693 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 PADI2Q9Y2J8 665 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 SALL3Q9BXA9 1300 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 A0A1W2PQ67 120 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 ALOX5P09917 674 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 GFPT1Q06210 699 aaPredicted RBP3.49□□□□□ -1.85
NEB-201ENST00000172853 LPCAT2Q7L5N7 544 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 ERO1BQ86YB8 467 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 PIGOQ8TEQ8 1089 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 ARMC5Q96C12 935 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 MFSD3Q96ES6 412 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 ADAM18Q9Y3Q7 739 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 PCDHGB1Q9Y5G3 927 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 ABCA10Q8WWZ4 1543 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 DNAJA2O60884 412 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 PTPRAP18433 802 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 CRYMQ14894 314 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 HLFQ16534 295 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 TMPPEQ6ZT21 453 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.49□□□□□ -1.85
NEB-201ENST00000172853 HPDLQ96IR7 371 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 ZSWIM3Q96MP5 696 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 SLC38A2Q96QD8 506 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 PDGFDQ9GZP0 370 aaPredicted RBP3.49□□□□□ -1.85
NEB-201ENST00000172853 DCTPP1Q9H773 170 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 IRGMA1A4Y4 181 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 DLGAP3O95886 979 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 TOP3BO95985 862 aaKnown RBP3.49□□□□□ -1.85
NEB-201ENST00000172853 GLUD1P00367 558 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 ACO1P21399 889 aaKnown RBP3.49□□□□□ -1.85
NEB-201ENST00000172853 POLR2HP52434 150 aaKnown RBP3.49□□□□□ -1.85
NEB-201ENST00000172853 RCAN1P53805 252 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 VPS26BQ4G0F5 336 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 SLC22A9Q8IVM8 553 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 GMCL1P1Q8NEA9 526 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 AGBL3Q8NEM8 1001 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 KLHL6Q8WZ60 621 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 ZDHHC6Q9H6R6 413 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 FANCLQ9NW38 375 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 CFL1P23528 166 aaKnown RBP3.49□□□□□ -1.85
NEB-201ENST00000172853 ELP6Q0PNE2 266 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 BAATQ14032 418 aaPredicted RBP3.49□□□□□ -1.85
NEB-201ENST00000172853 FEM1CQ96JP0 617 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 MNTQ99583 582 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 KCTD10Q9H3F6 313 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 TCP11X1B4DZS4 312 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 CHL1O00533 1208 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 MUSKO15146 869 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 MFAP3LO75121 409 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 LAG3P18627 525 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 PLCG1P19174 1290 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 DGKAP23743 735 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 EEF1A2Q05639 463 aaKnown RBP3.49□□□□□ -1.85
NEB-201ENST00000172853 KCNIP4Q6PIL6 250 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 CCNJLQ8IV13 435 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 NINJ1Q92982 152 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 TMEM143Q96AN5 459 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 LXNQ9BS40 222 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 BRF2Q9HAW0 419 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 CPA4Q9UI42 421 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 FBXO9Q9UK97 447 aaPredicted RBP3.49□□□□□ -1.85
NEB-201ENST00000172853 SAMD4AQ9UPU9 718 aaKnown RBP3.49□□□□□ -1.85
NEB-201ENST00000172853 PCDHA13Q9Y5I0 950 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 SPIN1Q9Y657 262 aaPredicted RBP3.49□□□□□ -1.85
NEB-201ENST00000172853 TMEM94Q12767 1356 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 BTBD17A6NE02 478 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 L7N2F9 121 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 IL1BP01584 269 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 CMPK1P30085 196 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 USP11P51784 963 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 VAMP2P63027 116 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 S100A7AQ86SG5 101 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 FAM228AQ86W67 206 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 ELMO1Q92556 727 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 KLHL15Q96M94 604 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 ZDHHC15Q96MV8 337 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 CADM1Q9BY67 442 aaKnown RBP3.49□□□□□ -1.85
NEB-201ENST00000172853 TMEM138Q9NPI0 162 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 COMMD8Q9NX08 183 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 ADGRF5Q8IZF2 1346 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 IQCMA0A1B0GVH7 501 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 POTECB2RU33 542 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 HCAR3P49019 387 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 PSEN1P49768 467 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 PSMD7P51665 324 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 DYNLL1P63167 89 aaKnown RBP3.49□□□□□ -1.85
NEB-201ENST00000172853 CRHR2Q13324 411 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 SEMA3AQ14563 771 aa3.49□□□□□ -1.85
NEB-201ENST00000172853 TTC39BQ5VTQ0 682 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms