RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 FTHL17Q9BXU8 183 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 FRMD8P1Q9BZ68 369 aaPredicted RBP17.04■□□□□ 0.32
CTDP1-201ENST00000075430 XPR1Q9UBH6 696 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 VANGL2Q9ULK5 521 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 A0A0A0MRY4 1105 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 NDUFV1P49821 464 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 RPL14P50914 215 aaKnown RBP17.03■□□□□ 0.32
CTDP1-201ENST00000075430 SLC44A4Q53GD3 710 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 ZNF618Q5T7W0 954 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 ZPBP2Q6X784 338 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 GAB3Q8WWW8 586 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 ARNTL2Q8WYA1 636 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 RNF34Q969K3 372 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 C18orf25Q96B23 403 aaPredicted RBP17.03■□□□□ 0.32
CTDP1-201ENST00000075430 VPS39Q96JC1 886 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 SPATA13Q96N96 652 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 GOLGA2P5Q9HBQ8 144 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 PNPLA8Q9NP80 782 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 DNAJB4Q9UDY4 337 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 RSL24D1Q9UHA3 163 aaKnown RBP17.03■□□□□ 0.32
CTDP1-201ENST00000075430 PGAP2Q9UHJ9 254 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 TSR3Q9UJK0 312 aaKnown RBP17.03■□□□□ 0.32
CTDP1-201ENST00000075430 FNDC3AQ9Y2H6 1198 aaKnown RBP17.03■□□□□ 0.32
CTDP1-201ENST00000075430 MAFBQ9Y5Q3 323 aaPredicted RBP17.03■□□□□ 0.32
CTDP1-201ENST00000075430 BCLAF3A2AJT9 711 aaKnown RBP17.03■□□□□ 0.32
CTDP1-201ENST00000075430 M0QYT0 321 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 ARIH2O95376 493 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 JCHAINP01591 159 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 PRKCGP05129 697 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 KIF19Q2TAC6 998 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 ARHGAP17Q68EM7 881 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 TTC33Q6PID6 262 aaPredicted RBP17.03■□□□□ 0.32
CTDP1-201ENST00000075430 EPGNQ6UW88 154 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 FBRSL1Q9HCM7 1045 aaKnown RBP17.03■□□□□ 0.32
CTDP1-201ENST00000075430 BARX2Q9UMQ3 279 aaPredicted RBP17.03■□□□□ 0.32
CTDP1-201ENST00000075430 HDAC3O15379 428 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 MPP1Q00013 466 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 CSHL1Q14406 222 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 FUT11Q495W5 492 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 OGFOD2Q6N063 350 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 KCNMB4Q86W47 210 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 HERC6Q8IVU3 1022 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.03■□□□□ 0.32
CTDP1-201ENST00000075430 SPATC1LQ9H0A9 340 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 THEGQ9P2T0 379 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 PCDHB12Q9Y5F1 795 aa17.03■□□□□ 0.32
CTDP1-201ENST00000075430 C9IYK1 514 aa17.02■□□□□ 0.32
CTDP1-201ENST00000075430 ZNF195O14628 629 aa17.02■□□□□ 0.32
CTDP1-201ENST00000075430 FARP2O94887 1054 aaPredicted RBP17.02■□□□□ 0.32
CTDP1-201ENST00000075430 PGAM1P18669 254 aa17.02■□□□□ 0.32
CTDP1-201ENST00000075430 AKAP5P24588 427 aa17.02■□□□□ 0.32
CTDP1-201ENST00000075430 LMO2P25791 158 aa17.02■□□□□ 0.32
CTDP1-201ENST00000075430 NMBRP28336 390 aa17.02■□□□□ 0.32
CTDP1-201ENST00000075430 GJA9P57773 515 aa17.02■□□□□ 0.32
CTDP1-201ENST00000075430 PSME3P61289 254 aa17.02■□□□□ 0.32
CTDP1-201ENST00000075430 CLEC6AQ6EIG7 209 aa17.02■□□□□ 0.32
CTDP1-201ENST00000075430 C16orf87Q6PH81 154 aa17.02■□□□□ 0.32
CTDP1-201ENST00000075430 ZNF410Q86VK4 478 aa17.02■□□□□ 0.32
CTDP1-201ENST00000075430 ZNF354CQ86Y25 554 aa17.02■□□□□ 0.32
CTDP1-201ENST00000075430 DCPSQ96C86 337 aaKnown RBP17.02■□□□□ 0.32
CTDP1-201ENST00000075430 NXNL1Q96CM4 212 aa17.02■□□□□ 0.32
CTDP1-201ENST00000075430 RMND5BQ96G75 393 aaPredicted RBP17.02■□□□□ 0.32
CTDP1-201ENST00000075430 MRPS26Q9BYN8 205 aaKnown RBP17.02■□□□□ 0.32
CTDP1-201ENST00000075430 DNAJC28Q9NX36 388 aa17.02■□□□□ 0.32
CTDP1-201ENST00000075430 C6orf203Q9P0P8 240 aaPredicted RBP17.02■□□□□ 0.32
CTDP1-201ENST00000075430 DMTF1Q9Y222 760 aa17.02■□□□□ 0.32
CTDP1-201ENST00000075430 RBMX2Q9Y388 322 aaKnown RBP17.02■□□□□ 0.32
CTDP1-201ENST00000075430 COL4A5P29400 1685 aa17.02■□□□□ 0.32
CTDP1-201ENST00000075430 SOWAHBA6NEL2 793 aa17.02■□□□□ 0.31
CTDP1-201ENST00000075430 CASQ2O14958 399 aaPredicted RBP17.02■□□□□ 0.31
CTDP1-201ENST00000075430 TSHRP16473 764 aa17.02■□□□□ 0.31
CTDP1-201ENST00000075430 CDH2P19022 906 aaPredicted RBP17.02■□□□□ 0.31
CTDP1-201ENST00000075430 CDH5P33151 784 aaPredicted RBP17.02■□□□□ 0.31
CTDP1-201ENST00000075430 NR1H2P55055 460 aa17.02■□□□□ 0.31
CTDP1-201ENST00000075430 CDH13P55290 713 aa17.02■□□□□ 0.31
CTDP1-201ENST00000075430 PCSK7Q16549 785 aa17.02■□□□□ 0.31
CTDP1-201ENST00000075430 ZIK1Q3SY52 487 aaPredicted RBP17.02■□□□□ 0.31
CTDP1-201ENST00000075430 RWDD4Q6NW29 188 aaKnown RBP17.02■□□□□ 0.31
CTDP1-201ENST00000075430 ZNF513Q8N8E2 541 aaPredicted RBP17.02■□□□□ 0.31
CTDP1-201ENST00000075430 IPMKQ8NFU5 416 aa17.02■□□□□ 0.31
CTDP1-201ENST00000075430 GCOM2Q9BZD3 368 aaPredicted RBP17.02■□□□□ 0.31
CTDP1-201ENST00000075430 AP3M2P53677 418 aa17.01■□□□□ 0.31
CTDP1-201ENST00000075430 SLC12A1Q13621 1099 aa17.01■□□□□ 0.31
CTDP1-201ENST00000075430 MGAT5BQ3V5L5 792 aa17.01■□□□□ 0.31
CTDP1-201ENST00000075430 NCBP2-AS2Q69YL0 99 aa17.01■□□□□ 0.31
CTDP1-201ENST00000075430 LDB1Q86U70 411 aaPredicted RBP17.01■□□□□ 0.31
CTDP1-201ENST00000075430 APOBEC3FQ8IUX4 373 aaKnown RBP17.01■□□□□ 0.31
CTDP1-201ENST00000075430 SPATA22Q8NHS9 363 aa17.01■□□□□ 0.31
CTDP1-201ENST00000075430 NCSTNQ92542 709 aa17.01■□□□□ 0.31
CTDP1-201ENST00000075430 BTBD9Q96Q07 612 aa17.01■□□□□ 0.31
CTDP1-201ENST00000075430 PFDN4Q9NQP4 134 aa17.01■□□□□ 0.31
CTDP1-201ENST00000075430 SORCS3Q9UPU3 1222 aa17.01■□□□□ 0.31
CTDP1-201ENST00000075430 COPG1Q9Y678 874 aaKnown RBP17.01■□□□□ 0.31
CTDP1-201ENST00000075430 SLC4A1P02730 911 aa17.01■□□□□ 0.31
CTDP1-201ENST00000075430 MCF2P10911 925 aa17.01■□□□□ 0.31
CTDP1-201ENST00000075430 SLC12A2P55011 1212 aa17.01■□□□□ 0.31
CTDP1-201ENST00000075430 CAPRIN1Q14444 709 aaKnown RBP17.01■□□□□ 0.31
CTDP1-201ENST00000075430 SLC10A6Q3KNW5 377 aa17.01■□□□□ 0.31
CTDP1-201ENST00000075430 TMEM174Q8WUU8 243 aa17.01■□□□□ 0.31
CTDP1-201ENST00000075430 TUT1Q9H6E5 874 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms