RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 MSI1O43347 362 aaKnown RBP8.44□□□□□ -1.06
CDC27-201ENST00000066544 HNRNPLP14866 589 aaKnown RBP eCLIP8.44□□□□□ -1.06
CDC27-201ENST00000066544 CYP2B6P20813 491 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 EPHX2P34913 555 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 MFSD10Q14728 455 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 ZNF354CQ86Y25 554 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 CNTD1Q8N815 330 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 SMG8Q8ND04 991 aaKnown RBP8.44□□□□□ -1.06
CDC27-201ENST00000066544 GATA6Q92908 595 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 RCN3Q96D15 328 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 ILKAPQ9H0C8 392 aaPredicted RBP8.44□□□□□ -1.06
CDC27-201ENST00000066544 CHST12Q9NRB3 414 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 GTSE1Q9NYZ3 720 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 IGSF9Q9P2J2 1179 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 SLC2A6Q9UGQ3 507 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 WDR90Q96KV7 1748 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 AURKAO14965 403 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 TSPAN8P19075 237 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 CNGA3Q16281 694 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 MMEL1Q495T6 779 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 OLFML2BQ68BL8 750 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 ESRP1Q6NXG1 681 aaKnown RBP8.43□□□□□ -1.06
CDC27-201ENST00000066544 ALKAL1Q6UXT8 129 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 TLK2Q86UE8 772 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 C3orf58Q8NDZ4 430 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 BRI3BPQ8WY22 251 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 NDNQ99608 321 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 XPR1Q9UBH6 696 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 SCNN1GP51170 649 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 PAFAH1B3Q15102 231 aaKnown RBP8.43□□□□□ -1.06
CDC27-201ENST00000066544 TBCCQ15814 346 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 LSM12Q3MHD2 195 aaKnown RBP8.43□□□□□ -1.06
CDC27-201ENST00000066544 TMC7Q7Z402 723 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 SHCBP1Q8NEM2 672 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 SCAMP5Q8TAC9 235 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 FICDQ9BVA6 458 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 GDAP2Q9NXN4 497 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 MYOCOSA0A1B0GUC4 107 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 FKBP6O75344 327 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 PGM3O95394 542 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 POMCP01189 267 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 PIK3R1P27986 724 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 PNPLA4P41247 253 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 BRCC3P46736 316 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 LBRQ14739 615 aaKnown RBP8.43□□□□□ -1.06
CDC27-201ENST00000066544 CCL14Q16627 93 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 LAYNQ6UX15 382 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 GALNT4Q8N4A0 578 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 SREK1Q8WXA9 508 aaKnown RBP8.43□□□□□ -1.06
CDC27-201ENST00000066544 NXNL1Q96CM4 212 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 EPAS1Q99814 870 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 SUDS3Q9H7L9 328 aaPredicted RBP8.43□□□□□ -1.06
CDC27-201ENST00000066544 MIOSQ9NXC5 875 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 SFMBT1Q9UHJ3 866 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 HARS2P49590 506 aaKnown RBP8.43□□□□□ -1.06
CDC27-201ENST00000066544 ARL13BQ3SXY8 428 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 FSCBQ5H9T9 825 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 TMEM135Q86UB9 458 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 TAC4Q86UU9 113 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 TTC16Q8NEE8 873 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 EXT2Q93063 718 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 EIF2B3Q9NR50 452 aaKnown RBP8.43□□□□□ -1.06
CDC27-201ENST00000066544 ZDHHC2Q9UIJ5 367 aa8.43□□□□□ -1.06
CDC27-201ENST00000066544 C9IYK1 514 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 BUD23O43709 281 aaKnown RBP8.42□□□□□ -1.06
CDC27-201ENST00000066544 AHSGP02765 367 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 XRCC1P18887 633 aaPredicted RBP8.42□□□□□ -1.06
CDC27-201ENST00000066544 HDCP19113 662 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 TFEBP19484 476 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 GJA9P57773 515 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 MED21Q13503 144 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 CCDC153Q494R4 210 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 TMCO4Q5TGY1 634 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 SEL1L3Q68CR1 1132 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 LDB1Q86U70 411 aaPredicted RBP8.42□□□□□ -1.06
CDC27-201ENST00000066544 FSTL5Q8N475 847 aaPredicted RBP8.42□□□□□ -1.06
CDC27-201ENST00000066544 ZSCAN18Q8TBC5 510 aaPredicted RBP8.42□□□□□ -1.06
CDC27-201ENST00000066544 RCOR3Q9P2K3 495 aaPredicted RBP8.42□□□□□ -1.06
CDC27-201ENST00000066544 TTC24A2A3L6 582 aaPredicted RBP8.42□□□□□ -1.06
CDC27-201ENST00000066544 ZNF487B1APH4 448 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 B3GAT3O94766 335 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 GABRB3P28472 473 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 PAPOLAP51003 745 aaKnown RBP8.42□□□□□ -1.06
CDC27-201ENST00000066544 THOP1P52888 689 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 ITKQ08881 620 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 PAXIP1Q6ZW49 1069 aaPredicted RBP8.42□□□□□ -1.06
CDC27-201ENST00000066544 PCDH20Q8N6Y1 951 aaKnown RBP8.42□□□□□ -1.06
CDC27-201ENST00000066544 NPAS2Q99743 824 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 TRIM4Q9C037 500 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 NDFIP2Q9NV92 336 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 DNAJC28Q9NX36 388 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 MPP6Q9NZW5 540 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 PSEN2P49810 448 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 ELMO2Q96JJ3 720 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 SGIP1Q9BQI5 828 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 DNAI2Q9GZS0 605 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 FBXW11Q9UKB1 542 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 CCDC160A6NGH7 325 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 PPIDQ08752 370 aaKnown RBP8.42□□□□□ -1.06
CDC27-201ENST00000066544 INSCQ1MX18 579 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms