RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 CMC1Q7Z7K0 106 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 ZNF354CQ86Y25 554 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 CCDC117Q8IWD4 279 aaPredicted RBP8.41□□□□□ -1.06
VAMP3-201ENST00000054666 KLHDC8BQ8IXV7 354 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 SPATA22Q8NHS9 363 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 VPS39Q96JC1 886 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 CAPNS2Q96L46 248 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 C1orf74Q96LT6 269 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 AGAP2Q99490 1192 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 KIFC1Q9BW19 673 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 ZYG11BQ9C0D3 744 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 STN1Q9H668 368 aaKnown RBP8.41□□□□□ -1.06
VAMP3-201ENST00000054666 ELAC1Q9H777 363 aaKnown RBP8.41□□□□□ -1.06
VAMP3-201ENST00000054666 SP110Q9HB58 689 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 GPBP1L1Q9HC44 474 aaPredicted RBP8.41□□□□□ -1.06
VAMP3-201ENST00000054666 TLR8Q9NR97 1041 aaKnown RBP8.41□□□□□ -1.06
VAMP3-201ENST00000054666 CHRAC1Q9NRG0 131 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 RBM22Q9NW64 420 aaKnown RBP eCLIP8.41□□□□□ -1.06
VAMP3-201ENST00000054666 MPP6Q9NZW5 540 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 COPG2Q9UBF2 871 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 PPARGC1AQ9UBK2 798 aaKnown RBP8.41□□□□□ -1.06
VAMP3-201ENST00000054666 IPO11Q9UI26 975 aaKnown RBP8.41□□□□□ -1.06
VAMP3-201ENST00000054666 EMCNQ9ULC0 261 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 A0A096LPK6 155 aa8.4□□□□□ -1.06
VAMP3-201ENST00000054666 HOXA2O43364 376 aa8.4□□□□□ -1.06
VAMP3-201ENST00000054666 MT-CYBP00156 380 aaPredicted RBP8.4□□□□□ -1.06
VAMP3-201ENST00000054666 GNRH1P01148 92 aa8.4□□□□□ -1.06
VAMP3-201ENST00000054666 HLA-DQB2P05538 268 aa8.4□□□□□ -1.06
VAMP3-201ENST00000054666 ESRRAP11474 423 aaPredicted RBP8.4□□□□□ -1.06
VAMP3-201ENST00000054666 NMBRP28336 390 aa8.4□□□□□ -1.06
VAMP3-201ENST00000054666 SLC1A6P48664 564 aa8.4□□□□□ -1.06
VAMP3-201ENST00000054666 PAPOLAP51003 745 aaKnown RBP8.4□□□□□ -1.06
VAMP3-201ENST00000054666 ARPP19P56211 112 aa8.4□□□□□ -1.06
VAMP3-201ENST00000054666 EFEMP1Q12805 493 aa8.4□□□□□ -1.06
VAMP3-201ENST00000054666 ELAVL2Q12926 359 aaKnown RBP8.4□□□□□ -1.06
VAMP3-201ENST00000054666 POU6F1Q14863 301 aa8.4□□□□□ -1.06
VAMP3-201ENST00000054666 KRT72Q14CN4 511 aa8.4□□□□□ -1.06
VAMP3-201ENST00000054666 TBCCQ15814 346 aa8.4□□□□□ -1.06
VAMP3-201ENST00000054666 CTC1Q2NKJ3 1217 aa8.4□□□□□ -1.06
VAMP3-201ENST00000054666 MGAT5BQ3V5L5 792 aa8.4□□□□□ -1.06
VAMP3-201ENST00000054666 PIK3R6Q5UE93 754 aa8.4□□□□□ -1.06
VAMP3-201ENST00000054666 FAM91A1Q658Y4 838 aa8.4□□□□□ -1.06
VAMP3-201ENST00000054666 PKN3Q6P5Z2 889 aa8.4□□□□□ -1.06
VAMP3-201ENST00000054666 POTEHQ6S545 545 aa8.4□□□□□ -1.06
VAMP3-201ENST00000054666 RAPH1Q70E73 1250 aa8.4□□□□□ -1.06
VAMP3-201ENST00000054666 SLC43A3Q8NBI5 491 aa8.4□□□□□ -1.06
VAMP3-201ENST00000054666 SLAIN1Q8ND83 568 aa8.4□□□□□ -1.06
VAMP3-201ENST00000054666 GABPB2Q8TAK5 448 aaPredicted RBP8.4□□□□□ -1.06
VAMP3-201ENST00000054666 PIWIL2Q8TC59 973 aaKnown RBP8.4□□□□□ -1.06
VAMP3-201ENST00000054666 SPPL2BQ8TCT7 592 aa8.4□□□□□ -1.06
VAMP3-201ENST00000054666 SLC7A6OSQ96CW6 309 aaPredicted RBP8.4□□□□□ -1.06
VAMP3-201ENST00000054666 NSL1Q96IY1 281 aa8.4□□□□□ -1.06
VAMP3-201ENST00000054666 RILPQ96NA2 401 aa8.4□□□□□ -1.06
VAMP3-201ENST00000054666 SEPT5Q99719 369 aaPredicted RBP8.4□□□□□ -1.06
VAMP3-201ENST00000054666 TBC1D10AQ9BXI6 508 aa8.4□□□□□ -1.06
VAMP3-201ENST00000054666 MRM3Q9HC36 420 aaKnown RBP8.4□□□□□ -1.06
VAMP3-201ENST00000054666 CLIC5Q9NZA1 410 aa8.4□□□□□ -1.06
VAMP3-201ENST00000054666 TLK1Q9UKI8 766 aa8.4□□□□□ -1.06
VAMP3-201ENST00000054666 CCDC78A2IDD5 438 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 C2orf71A6NGG8 1288 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 H2AFYO75367 372 aaKnown RBP8.39□□□□□ -1.07
VAMP3-201ENST00000054666 APOA4P06727 396 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 T-ENOLP0DO92 83 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 RALBP11234 206 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 FGF3P11487 239 aaPredicted RBP8.39□□□□□ -1.07
VAMP3-201ENST00000054666 RHOQP17081 205 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 CCND1P24385 295 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 PGFP49763 221 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 RENBPP51606 427 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 NDST2P52849 883 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 MLLT6P55198 1093 aaPredicted RBP8.39□□□□□ -1.07
VAMP3-201ENST00000054666 SMARCB1Q12824 385 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 MTA1Q13330 715 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 THOC5Q13769 683 aaKnown RBP8.39□□□□□ -1.07
VAMP3-201ENST00000054666 SEPT6Q14141 434 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 PPM1JQ5JR12 505 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 ACBD5Q5T8D3 534 aaPredicted RBP8.39□□□□□ -1.07
VAMP3-201ENST00000054666 AFMIDQ63HM1 303 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 TFAP2DQ7Z6R9 452 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 ALYREFQ86V81 257 aaKnown RBP8.39□□□□□ -1.07
VAMP3-201ENST00000054666 LONP2Q86WA8 852 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 C10orf107Q8IVU9 208 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 ARHGAP24Q8N264 748 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 ATAD1Q8NBU5 361 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 ZSCAN18Q8TBC5 510 aaPredicted RBP8.39□□□□□ -1.07
VAMP3-201ENST00000054666 SEPT8Q92599 483 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 MCUR1Q96AQ8 359 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 SLC39A13Q96H72 371 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 BTN2A3PQ96KV6 586 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 MRPL9Q9BYD2 267 aaKnown RBP8.39□□□□□ -1.07
VAMP3-201ENST00000054666 PRKD2Q9BZL6 878 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 NMUR2Q9GZQ4 415 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 RHOJQ9H4E5 214 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 NDFIP2Q9NV92 336 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 OSER1Q9NX31 292 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 TMEM216Q9P0N5 145 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 RPL26L1Q9UNX3 145 aaKnown RBP8.39□□□□□ -1.07
VAMP3-201ENST00000054666 ANKRD6Q9Y2G4 727 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 DNAJC16Q9Y2G8 782 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 TCAF1Q9Y4C2 921 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms