RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Cox16Q9CR63 106 aa12.52□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Wdr89Q9D0R9 386 aa12.52□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Mrpl17Q9D8P4 176 aa12.52□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Snx5Q9D8U8 404 aa12.52□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Abcg8Q9DBM0 673 aa12.52□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Vmn2r-ps130A0A140T8U3 855 aa12.52□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Cdr2lA2A6T1 465 aa12.52□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 UprtB1AVZ0 310 aa12.52□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Usp17lbE9Q9U0 468 aa12.52□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Kcnk4O88454 398 aa12.52□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 LtfP08071 707 aa12.52□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Tcea1P10711 301 aaKnown RBP12.52□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Itgb8Q0VBD0 767 aa12.52□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Gcnt3Q5JCT0 437 aa12.52□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Letm2Q7TNU7 480 aa12.52□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Pnma2Q8BHK0 365 aa12.52□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Tspan9Q8BJU2 239 aa12.52□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Tmem82Q8R115 356 aa12.52□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Lman1lQ8VCD3 505 aa12.52□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 OptcQ920A0 328 aa12.52□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 SncaipQ99ME3 962 aa12.52□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Pih1d1Q9CQJ2 290 aa12.52□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Gprc5dQ9JIL6 344 aa12.52□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Slc7a8Q9QXW9 531 aa12.52□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Hmgb2P30681 210 aaKnown RBP12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Btg3P50615 252 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Otol1Q4ZJM7 482 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Tnfaip2Q61333 691 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 ScapQ6GQT6 1276 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Slc7a14Q8BXR1 771 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Trib2Q8K4K3 343 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Ap3m2Q8R2R9 418 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Chid1Q922Q9 393 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Ferd3lQ923Z4 168 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Adi1Q99JT9 179 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Ubxn2aQ99KJ0 258 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Rnf111Q99ML9 989 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Gadd45gip1Q9CR59 222 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Tomm70Q9CZW5 611 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Pou5f2Q9DAC9 329 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Ccdc86Q9JJ89 426 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Smpd3Q9JJY3 655 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Gm3371F7CQW8 167 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Rad51bO35719 350 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Slc1a2P43006 572 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 St14P56677 855 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Map4k1P70218 827 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Zbtb48Q1H9T6 681 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 DtlQ3TLR7 729 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Gm136Q3V037 328 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Mapk4Q6P5G0 583 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Kctd12Q6WVG3 327 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Mfn2Q80U63 757 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 6820408C15RikQ8BJX2 354 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Ccdc184Q8BMK5 191 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Isl2Q9CXV0 359 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Mdm1Q9D067 708 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Myh9Q8VDD5 1960 aaKnown RBP12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Gbp4A4UUI3 631 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Gm5160F8VPN3 147 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Zfp457L7N1X4 647 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Tpst1O70281 370 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Klc2O88448 599 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Irf8P23611 424 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 UcmaQ14BU0 138 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Syn2Q64332 586 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Q6P2K3 674 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Arhgap22Q8BL80 702 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Zfp398Q8BV16 643 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Pnma1Q8C1C8 353 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Ppp1r11Q8K1L5 131 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Serpinb11Q9CQV3 388 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 YwhabQ9CQV8 246 aaKnown RBP12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Igdcc4Q9EQS9 1252 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Slco1c1Q9ERB5 715 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Ripk3Q9QZL0 486 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 PrebQ9WUQ2 417 aa12.51□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Klhl3E0CZ16 587 aa12.5□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 2210016F16RikG3X8U3 338 aa12.5□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Vmn2r19G5E8G4 854 aa12.5□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Tnfrsf11bO08712 401 aa12.5□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Kif1cO35071 1100 aaKnown RBP12.5□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Zfp217Q3U0X6 1041 aa12.5□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Rundc3bQ6PDC0 408 aa12.5□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 ItpkcQ7TS72 678 aa12.5□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Amigo1Q80ZD8 492 aa12.5□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Zfp62Q8C827 914 aa12.5□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Stx5Q8K1E0 355 aa12.5□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Adam32Q8K410 754 aa12.5□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Pcdhgc3Q91XX1 934 aa12.5□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Gprc5bQ923Z0 410 aa12.5□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 MvdQ99JF5 401 aa12.5□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Ankrd61Q9CQM6 421 aa12.5□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Rnaseh2aQ9CWY8 301 aa12.5□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 2010109A12RikQ9D875 119 aa12.5□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Vwa7Q9JHA8 891 aa12.5□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Klrc1Q9Z202 244 aa12.5□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Unc13bQ9Z1N9 1602 aa12.5□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Plcg1Q62077 1302 aa12.5□□□□□ -0.41
Pcdh1-202ENSMUST00000159405 Cldn24D3YXJ9 220 aa12.5□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 43.9 ms