RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Vmn2r11E9Q4X4 861 aa13.6□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Raph1F2Z3U3 1266 aa13.6□□□□□ -0.23
Clcn3-204ENSMUST00000110301 KlO35082 1014 aa13.6□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Klc1O88447 541 aa13.6□□□□□ -0.23
Clcn3-204ENSMUST00000110301 LdhcP00342 332 aa13.6□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Serpina3kP07759 418 aa13.6□□□□□ -0.23
Clcn3-204ENSMUST00000110301 MaptP10637 733 aa13.6□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Aldh3a1P47739 453 aa13.6□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Grik1Q60934 836 aa13.6□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Kcna5Q61762 602 aa13.6□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Sh3gl2Q62420 352 aa13.6□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Znf668Q8K2R5 619 aa13.6□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Clstn3Q99JH7 956 aa13.6□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Elf4Q9Z2U4 655 aa13.6□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Erich1E9PY43 332 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Abhd12bG3UZN6 359 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Gm10250G3X9L6 160 aaKnown RBP13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Scamp3O35609 349 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Pax3P24610 479 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Cntnap5bQ0V8T8 1292 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Rap1gap2Q5SVL6 712 aaKnown RBP13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 PterQ60866 349 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Tmtc3Q8BRH0 920 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 PreplQ8C167 725 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Leng1Q9DB98 261 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Atp5hQ9DCX2 161 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 AuhQ9JLZ3 314 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Clec4aQ9QZ15 238 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Stk25Q9Z2W1 426 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Pgk1P09411 417 aaKnown RBP13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 TktP40142 623 aaKnown RBP13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Serping1P97290 504 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Zfp560Q3URI6 754 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Gpr19Q61121 415 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Krt73Q6NXH9 539 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Ttyh3Q6P5F7 524 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Q810S2 196 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Ccdc90bQ8C3X2 256 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Zfp62Q8C827 914 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 NaprtQ8CC86 538 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Syn3Q8JZP2 579 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Tm9sf1Q9DBU0 606 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Rbck1Q9WUB0 508 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 ApipQ9WVQ5 241 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 NficP70255 439 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Cdh6P97326 790 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Eml1Q05BC3 814 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Arhgap17Q3UIA2 846 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Znf583Q3V080 568 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Gpr65Q61038 337 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Adamts2Q8C9W3 1213 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Ndufs1Q91VD9 727 aaKnown RBP13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Txndc12Q9CQU0 170 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 GatmQ9D964 423 aaKnown RBP13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 AvenQ9D9K3 342 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 PllpQ9DCU2 182 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 QkiQ9QYS9 341 aaKnown RBP13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Fkbp1bQ9Z2I2 108 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Myo18aQ9JMH9 2050 aaKnown RBP13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Plxnb2B2RXS4 1842 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Ighv11-1A0A075B5R6 117 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Ttc7bE9Q6P5 843 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 UmpsP13439 481 aaKnown RBP13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Scd1P13516 355 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Tmem45aQ60774 273 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Znf280cQ6P3Y5 742 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Tecpr1Q80VP0 1166 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Clca1Q9D7Z6 913 aa13.59□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Kcnt2D3Z649 1135 aa13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Ccl26F8VQM2 93 aa13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Coro1aO89053 461 aa13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Arid5aQ3U108 590 aa13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Tmem199Q5SYH2 208 aa13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Pcid2Q8BFV2 399 aaKnown RBP13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Nup54Q8BTS4 510 aaKnown RBP13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Wdr60Q8C761 999 aa13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Pcdha3Q91Y16 942 aa13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Entpd5Q9WUZ9 427 aa13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 A630010A05RikA9C473 232 aa13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Nccrp1G3X9C2 266 aa13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Chrna4O70174 629 aa13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Abl2Q4JIM5 1182 aa13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Zfp719Q8BIV1 735 aa13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Zswim3Q8CFL8 695 aa13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Nmnat1Q9EPA7 285 aa13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Klhl41A2AUC9 606 aa13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 4930558K02RikE0CXC6 182 aa13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Igf2bp1O88477 577 aaKnown RBP13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Psmc3O88685 442 aa13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 CkmP07310 381 aa13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Atxn1lP0C7T6 687 aa13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Igsf9Q05BQ1 1179 aa13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Syce2Q505B8 171 aa13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 HnrnpdQ60668 355 aaKnown RBP13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Xlr3bQ6P205 226 aa13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Tmem270Q6UJB9 264 aa13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Slco2b1Q8BXB6 683 aa13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Ablim1Q8K4G5 861 aa13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Barhl2Q8VIB5 384 aa13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Pcdha6Q91Y14 946 aa13.58□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 35.9 ms