RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Bri3bpQ8BXV2 253 aa17.14■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Scara3Q8C850 606 aa17.14■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Lamtor4Q8CF66 99 aa17.14■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Dhrs7Q9CXR1 338 aa17.14■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Gm7942L7N277 499 aa17.14■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Mthfd2P18155 350 aaKnown RBP17.14■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Mpp1P70290 466 aa17.14■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Pla2g5P97391 137 aa17.14■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Naa50Q6PGB6 169 aaKnown RBP17.14■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Serpinb3dQ6UKZ0 387 aa17.14■□□□□ 0.33
Ctcf-201ENSMUST00000005841 UnkQ8BL48 810 aaKnown RBP17.14■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Neto2Q8BNJ6 525 aa17.14■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Ugt2b34Q8K154 532 aa17.14■□□□□ 0.33
Ctcf-201ENSMUST00000005841 FdpsQ920E5 353 aa17.14■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Ndufa10Q99LC3 355 aaKnown RBP17.14■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Dbn1Q9QXS6 706 aa17.14■□□□□ 0.33
Ctcf-201ENSMUST00000005841 TfgQ9Z1A1 397 aa17.14■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Stat5aP42230 793 aa17.14■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Cyb5r2Q3KNK3 276 aa17.14■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Cwf19l2Q8BG79 887 aaKnown RBP17.14■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Colgalt1Q8K297 617 aa17.14■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Raver1Q9CW46 748 aaKnown RBP17.14■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Hcar2Q9EP66 360 aa17.14■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Slc23a1Q9Z2J0 605 aa17.14■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Plxna1P70206 1894 aa17.14■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Trim5E9PV98 497 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Gm17535J3KMR8 224 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Olfr237-ps1K9J725 310 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Ptpn9O35239 593 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Exoc7O35250 697 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Fam198aQ3UY90 562 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Pacs2Q3V3Q7 862 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Klhl14Q69ZK5 630 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Tmem39bQ810L4 492 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Trim35Q8C006 501 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 IrgcQ8C262 412 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Ankrd61Q9CQM6 421 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Tma16Q9CR02 221 aaKnown RBP17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Scyl3Q9DBQ7 735 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Slamf1Q9QUM4 343 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Foxn1Q61575 648 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Stxbp2Q64324 593 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Olfr297Q7TS07 310 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Trit1Q80UN9 467 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Pole4Q9CQ36 118 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Spesp1Q9D5A0 399 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Slc29a1Q9JIM1 460 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Cdkl2Q9QUK0 568 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Gm10722F6VLK5 217 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Alox8O35936 677 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Akap3O88987 864 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 H2-Eb1P04230 264 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Psmd7P26516 321 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Gnl1P36916 607 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Klhl17Q6TDP3 640 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Sel1l3Q80TS8 1137 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Trnau1apQ80VC6 287 aaKnown RBP17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Wdr27Q8C5V5 780 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Trim8Q99PJ2 551 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Tmbim6Q9D2C7 237 aa17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Scyl1Q9EQC5 806 aaKnown RBP17.13■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Cylc2B1AWN8 422 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Acp4D3YTS9 425 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Atf6F6VAN0 656 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Pde9aO70628 534 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Apba3O88888 571 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 PenkP22005 268 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Rps3aP97351 264 aaKnown RBP17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Fam160a1Q505K2 1081 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 PhgdhQ61753 533 aaKnown RBP17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Atp2a3Q64518 1038 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Otud6aQ6IE21 290 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Rab36Q8CAM5 267 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Hormad1Q9D5T7 392 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Ifrd2Q9D8U0 441 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 H2bfmQ9DAB5 224 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Cib1Q9Z0F4 191 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 S1pr4Q9Z0L1 386 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Gria4Q9Z2W8 902 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 PtprfA2A8L5 1898 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Olfr731F8VQB9 326 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Scd1P13516 355 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Krt6aP50446 553 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Pla2g6P97819 807 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Mcm9Q2KHI9 1134 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Hddc2Q3SXD3 199 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 DeptorQ570Y9 409 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Itih1Q61702 907 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Tcaf3Q6QR59 914 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Dlgap2Q8BJ42 1059 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Vps50Q8CI71 964 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Dhrs1Q99L04 313 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 S100a14Q9D2Q8 104 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Ampd2Q9DBT5 798 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Tmem131O70472 1877 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Ank3G5E8K5 1961 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Gm5689F6Y2A6 97 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Pot1bH7BX60 640 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Ido1P28776 407 aaKnown RBP17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Ppp3ccP48455 513 aa17.12■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms