RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 ADPRHP54922 357 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 SLC8A3P57103 927 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 ST8SIA6P61647 398 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 SGO2Q562F6 1265 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 MSANTD2Q6P1R3 559 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 PCSK4Q6UW60 755 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 SPATS2Q86XZ4 545 aaKnown RBP10.34□□□□□ -0.75
PHGDH-222ENST00000641587 FAM71AQ8IYT1 594 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 SIX6OS1Q8N1H7 587 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 CFAP52Q8N1V2 620 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 STK40Q8N2I9 435 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 CARNMT1Q8N4J0 409 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 TTC39CQ8N584 583 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 OR2T34Q8NGX1 318 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 TFAP2BQ92481 460 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 TSC1Q92574 1164 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 TTC17Q96AE7 1141 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 FAXDC2Q96IV6 333 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 SERAC1Q96JX3 654 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 OMDQ99983 421 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 DNAI2Q9GZS0 605 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 GDF3Q9NR23 364 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 ABCC13Q9NSE7 274 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 SEPT11Q9NVA2 429 aaKnown RBP10.34□□□□□ -0.75
PHGDH-222ENST00000641587 HESX1Q9UBX0 185 aa10.34□□□□□ -0.75
PHGDH-222ENST00000641587 XPO7Q9UIA9 1087 aaKnown RBP10.34□□□□□ -0.75
PHGDH-222ENST00000641587 SOWAHDA6NJG2 315 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 LRRC72A6NJI9 287 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 THAP12O43422 761 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 BRINP1O60477 761 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 MOCS2O96007 188 aaPredicted RBP10.33□□□□□ -0.76
PHGDH-222ENST00000641587 GNA15P30679 374 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 TBX4P57082 545 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 NXPH1P58417 271 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 BPIFB4P59827 614 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 PTK2Q05397 1052 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 RTP5Q14D33 572 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 PKDCCQ504Y2 493 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 PITRM1Q5JRX3 1037 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 MPP7Q5T2T1 576 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 TAF3Q5VWG9 929 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 PMF1Q6P1K2 205 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 WDR59Q6PJI9 974 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 LRRC69Q6ZNQ3 347 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 KANSL1Q7Z3B3 1105 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 VPS36Q86VN1 386 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 TMTC1Q8IUR5 882 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 APCDD1Q8J025 514 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 ZNF843Q8N446 348 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 UBR7Q8N806 425 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 HJURPQ8NCD3 748 aaPredicted RBP10.33□□□□□ -0.76
PHGDH-222ENST00000641587 OR14C36Q8NHC7 312 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 SNIP1Q8TAD8 396 aaKnown RBP10.33□□□□□ -0.76
PHGDH-222ENST00000641587 FIBINQ8TAL6 211 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 NAF1Q96HR8 494 aaKnown RBP10.33□□□□□ -0.76
PHGDH-222ENST00000641587 RPL10LQ96L21 214 aaKnown RBP10.33□□□□□ -0.76
PHGDH-222ENST00000641587 FCRL2Q96LA5 508 aaPredicted RBP10.33□□□□□ -0.76
PHGDH-222ENST00000641587 CCDC42Q96M95 316 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 FAM129BQ96TA1 746 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 ZSWIM1Q9BR11 485 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.33□□□□□ -0.76
PHGDH-222ENST00000641587 PDCL3Q9H2J4 239 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 CNGB3Q9NQW8 809 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 AIPL1Q9NZN9 384 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 ADAMTS1Q9UHI8 967 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 SLCO3A1Q9UIG8 710 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 SCML1Q9UN30 329 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 ERVW-1Q9UQF0 538 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 CA5BQ9Y2D0 317 aa10.33□□□□□ -0.76
PHGDH-222ENST00000641587 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.33□□□□□ -0.76
PHGDH-222ENST00000641587 TDRD6O60522 2096 aaKnown RBP10.32□□□□□ -0.76
PHGDH-222ENST00000641587 CYSRT1A8MQ03 144 aa10.32□□□□□ -0.76
PHGDH-222ENST00000641587 TLR4O00206 839 aa10.32□□□□□ -0.76
PHGDH-222ENST00000641587 AKR1B10O60218 316 aa10.32□□□□□ -0.76
PHGDH-222ENST00000641587 RNASEH1O60930 286 aaKnown RBP10.32□□□□□ -0.76
PHGDH-222ENST00000641587 IPO7O95373 1038 aaKnown RBP10.32□□□□□ -0.76
PHGDH-222ENST00000641587 LTFP02788 710 aa10.32□□□□□ -0.76
PHGDH-222ENST00000641587 ASLP04424 464 aa10.32□□□□□ -0.76
PHGDH-222ENST00000641587 FYNP06241 537 aa10.32□□□□□ -0.76
PHGDH-222ENST00000641587 PLEKP08567 350 aaPredicted RBP10.32□□□□□ -0.76
PHGDH-222ENST00000641587 SETSIPP0DME0 302 aa10.32□□□□□ -0.76
PHGDH-222ENST00000641587 BRD2P25440 801 aaKnown RBP10.32□□□□□ -0.76
PHGDH-222ENST00000641587 MZF1P28698 734 aaPredicted RBP10.32□□□□□ -0.76
PHGDH-222ENST00000641587 MAT2AP31153 395 aaKnown RBP10.32□□□□□ -0.76
PHGDH-222ENST00000641587 HNRNPH3P31942 346 aaKnown RBP10.32□□□□□ -0.76
PHGDH-222ENST00000641587 DRD3P35462 400 aa10.32□□□□□ -0.76
PHGDH-222ENST00000641587 EIF4A3P38919 411 aaKnown RBP10.32□□□□□ -0.76
PHGDH-222ENST00000641587 SLC11A2P49281 568 aa10.32□□□□□ -0.76
PHGDH-222ENST00000641587 CCZ1BP86790 482 aa10.32□□□□□ -0.76
PHGDH-222ENST00000641587 CCZ1P86791 482 aaPredicted RBP10.32□□□□□ -0.76
PHGDH-222ENST00000641587 INSM1Q01101 510 aaPredicted RBP10.32□□□□□ -0.76
PHGDH-222ENST00000641587 CDH18Q13634 790 aa10.32□□□□□ -0.76
PHGDH-222ENST00000641587 MEA1Q16626 185 aa10.32□□□□□ -0.76
PHGDH-222ENST00000641587 POM121L1PQ3SYA9 428 aa10.32□□□□□ -0.76
PHGDH-222ENST00000641587 DCAF6Q58WW2 860 aa10.32□□□□□ -0.76
PHGDH-222ENST00000641587 NUGGCQ68CJ6 796 aa10.32□□□□□ -0.76
PHGDH-222ENST00000641587 SLC47A2Q86VL8 602 aa10.32□□□□□ -0.76
PHGDH-222ENST00000641587 CIR1Q86X95 450 aaPredicted RBP10.32□□□□□ -0.76
PHGDH-222ENST00000641587 SLC20A1Q8WUM9 679 aa10.32□□□□□ -0.76
PHGDH-222ENST00000641587 KCTD13Q8WZ19 329 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms