RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 NAALADL1Q9UQQ1 740 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 DOCK6Q96HP0 2047 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 SZT2Q5T011 3432 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 REV3LO60673 3130 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 MIF4GDA9UHW6 222 aaKnown RBP8.24□□□□□ -1.09
SCARB2-220ENST00000640076 RFXAPO00287 272 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 CAPN9O14815 690 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 PER2O15055 1255 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 DLX3O60479 287 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 RNF8O76064 485 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 NCAM1P13591 858 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 TCF4P15884 667 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 EPCAMP16422 314 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 CTNNA1P35221 906 aaKnown RBP8.24□□□□□ -1.09
SCARB2-220ENST00000640076 LSSP48449 732 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 MARCKSL1P49006 195 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 TAS2R40P59535 323 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 PITX1P78337 314 aaPredicted RBP8.24□□□□□ -1.09
SCARB2-220ENST00000640076 AMPD2Q01433 879 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 BTKQ06187 659 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 PLD1Q13393 1074 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 RPS6KA1Q15418 735 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 CDO1Q16878 200 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 ZNF423Q2M1K9 1284 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 WIPI1Q5MNZ9 446 aaPredicted RBP8.24□□□□□ -1.09
SCARB2-220ENST00000640076 OTUD1Q5VV17 481 aaPredicted RBP8.24□□□□□ -1.09
SCARB2-220ENST00000640076 TLDC1Q6P9B6 456 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 BNIPLQ7Z465 357 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 DNAJB7Q7Z6W7 309 aaPredicted RBP8.24□□□□□ -1.09
SCARB2-220ENST00000640076 ARHGAP18Q8N392 663 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 RNF217Q8TC41 542 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 KRT35Q92764 455 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 PSMG2Q969U7 264 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 SLITRK1Q96PX8 696 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 TBCBQ99426 244 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 PLEKHA4Q9H4M7 779 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 ABCC13Q9NSE7 274 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 C14orf119Q9NWQ9 140 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 OSER1Q9NX31 292 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 SAMD15Q9P1V8 674 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 CALCOCO1Q9P1Z2 691 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.24□□□□□ -1.09
SCARB2-220ENST00000640076 STAP1Q9ULZ2 295 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 SNX12Q9UMY4 172 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 MAGED2Q9UNF1 606 aaPredicted RBP8.24□□□□□ -1.09
SCARB2-220ENST00000640076 RABL2BQ9UNT1 228 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 ASB3Q9Y575 518 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 CCDC66A2RUB6 948 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 BLACEA4D250 179 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 CBX4O00257 560 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 LRG1P02750 347 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 ZDHHC11BP0C7U3 371 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 DESP17661 470 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 CTNNA2P26232 953 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 MIPP30301 263 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 PCK1P35558 622 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 RPIAP49247 311 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 PEX5P50542 639 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 DNA2P51530 1060 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 HDAC4P56524 1084 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 PCDH1Q08174 1060 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 DUSP6Q16828 381 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 RAB6CQ53S08 254 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 TMEM201Q5SNT2 666 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 LRRC38Q5VT99 294 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 BTBD8Q5XKL5 378 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 FAM180BQ6P0A1 224 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 C16orf87Q6PH81 154 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 RTL10Q7L3V2 364 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 STRADAQ7RTN6 431 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 RBM23Q86U06 439 aaKnown RBP8.23□□□□□ -1.09
SCARB2-220ENST00000640076 ITIH5Q86UX2 942 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 FAM172AQ8WUF8 416 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 HDAC7Q8WUI4 952 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 OVCA2Q8WZ82 227 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 ALG3Q92685 438 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 TRIM63Q969Q1 353 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 TBC1D31Q96DN5 1066 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 ITPKCQ96DU7 683 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 MRPL38Q96DV4 380 aaKnown RBP8.23□□□□□ -1.09
SCARB2-220ENST00000640076 DHRS1Q96LJ7 313 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 PSMB7Q99436 277 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 RAB6CQ9H0N0 254 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 ANAPC1Q9H1A4 1944 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 TLE6Q9H808 572 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 FAM204AQ9H8W3 233 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 TLR8Q9NR97 1041 aaKnown RBP8.23□□□□□ -1.09
SCARB2-220ENST00000640076 FAM86C1Q9NVL1 165 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 RRN3Q9NYV6 651 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 PCDHA3Q9Y5H8 950 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 HCFC2Q9Y5Z7 792 aa8.23□□□□□ -1.09
SCARB2-220ENST00000640076 M0QYT0 321 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 PSTPIP1O43586 416 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 URI1O94763 535 aaPredicted RBP8.22□□□□□ -1.09
SCARB2-220ENST00000640076 ENDOD1O94919 500 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 PRLRP16471 622 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 CAPN3P20807 821 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 IL1R2P27930 398 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 HOXA9P31269 272 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 CXCR5P32302 372 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms