RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 SURF6O75683 361 aaKnown RBP3.64□□□□□ -1.83
CCDC7-213ENST00000639290 IGHEP01854 428 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 ALPPP05187 535 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 VSIG8P0DPA2 414 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 BMP2P12643 396 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 GOT1P17174 413 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 TYRP1P17643 537 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 TUBP50607 506 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 THOP1P52888 689 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 AP3B2Q13367 1082 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 COX20Q5RI15 118 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 RINT1Q6NUQ1 792 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 NEK5Q6P3R8 708 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 NCEH1Q6PIU2 408 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 VASH1Q7L8A9 365 aaPredicted RBP3.64□□□□□ -1.83
CCDC7-213ENST00000639290 LINC00528Q8N1L1 170 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 FSTL5Q8N475 847 aaPredicted RBP3.64□□□□□ -1.83
CCDC7-213ENST00000639290 ATAD1Q8NBU5 361 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 AGBL5Q8NDL9 886 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 NUP43Q8NFH3 380 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 PRPF31Q8WWY3 499 aaKnown RBP3.64□□□□□ -1.83
CCDC7-213ENST00000639290 ITPKCQ96DU7 683 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 RIT2Q99578 217 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 TCHPQ9BT92 498 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 POLDIP3Q9BY77 421 aaKnown RBP3.64□□□□□ -1.83
CCDC7-213ENST00000639290 CPVLQ9H3G5 476 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 VAT1LQ9HCJ6 419 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 RCOR3Q9P2K3 495 aaPredicted RBP3.64□□□□□ -1.83
CCDC7-213ENST00000639290 CACNG4Q9UBN1 327 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 CYTH4Q9UIA0 394 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 MAPK8IP1Q9UQF2 711 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 COMMD10Q9Y6G5 202 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 PNMA6EA0A0J9YXQ4 647 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 CDC14CA4D256 554 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 I3L4J1 428 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 CLDN4O14493 209 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 TOR1BO14657 336 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 MT-ND3P03897 115 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 CYP3A5P20815 502 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 LRPAP1P30533 357 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 MASP1P48740 699 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 RRADP55042 308 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 CCL7P80098 99 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 ZNF234Q14588 700 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 FOXD4L6Q3SYB3 417 aaPredicted RBP3.63□□□□□ -1.83
CCDC7-213ENST00000639290 OVOS1Q6IE37 1185 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 ALKAL1Q6UXT8 129 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 FOXD4L3Q6VB84 417 aaPredicted RBP3.63□□□□□ -1.83
CCDC7-213ENST00000639290 NAPRTQ6XQN6 538 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 ANKS1BQ7Z6G8 1248 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 CPSF7Q8N684 471 aaKnown RBP3.63□□□□□ -1.83
CCDC7-213ENST00000639290 GOT1L1Q8NHS2 421 aaPredicted RBP3.63□□□□□ -1.83
CCDC7-213ENST00000639290 SPATA17Q96L03 361 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 PGLYRP2Q96PD5 576 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 PLCD4Q9BRC7 762 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 TRIM56Q9BRZ2 755 aaKnown RBP3.63□□□□□ -1.83
CCDC7-213ENST00000639290 TTLL2Q9BWV7 592 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 TWSG1Q9GZX9 223 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 ZFAND3Q9H8U3 227 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 APEX2Q9UBZ4 518 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 HYDINQ4G0P3 5121 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 SMIM28A0A1B0GU29 152 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 A0A1W2PQM1 296 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 GOLGA6L3A6NEY3 463 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 EIF1AYO14602 144 aaKnown RBP3.63□□□□□ -1.83
CCDC7-213ENST00000639290 CTIFO43310 598 aaKnown RBP3.63□□□□□ -1.83
CCDC7-213ENST00000639290 ZRANB2O95218 330 aaKnown RBP eCLIP3.63□□□□□ -1.83
CCDC7-213ENST00000639290 ODC1P11926 461 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 ETFBP38117 255 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 MAGEA11P43364 429 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 NASPP49321 788 aaPredicted RBP3.63□□□□□ -1.83
CCDC7-213ENST00000639290 YARSP54577 528 aaKnown RBP3.63□□□□□ -1.83
CCDC7-213ENST00000639290 ADORA2A-AS1P86434 159 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 MYL7Q01449 175 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 TAP2Q03519 686 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 DMP1Q13316 513 aaPredicted RBP3.63□□□□□ -1.83
CCDC7-213ENST00000639290 HYAL4Q2M3T9 481 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 LINGO4Q6UY18 593 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 ZNF517Q6ZMY9 492 aaPredicted RBP3.63□□□□□ -1.83
CCDC7-213ENST00000639290 ABI3BPQ7Z7G0 1075 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 SYVN1Q86TM6 617 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 CCNJLQ8IV13 435 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 SLC35F3Q8IY50 421 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 CCDC116Q8IYX3 515 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 RNF149Q8NC42 400 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 KIAA0895Q8NCT3 520 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 ARHGAP45Q92619 1136 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 P2RY11Q96G91 374 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 CPB2Q96IY4 423 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 SLC22A12Q96S37 553 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 MAP3K14Q99558 947 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 GPR87Q9BY21 358 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 C2orf40Q9H1Z8 148 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 IKZF4Q9H2S9 585 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 PSTPIP2Q9H939 334 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 FBXO8Q9NRD0 319 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 PGPEP1Q9NXJ5 209 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 IL17CQ9P0M4 197 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 CFAP97Q9P2B7 532 aa3.63□□□□□ -1.83
CCDC7-213ENST00000639290 MTMR6Q9Y217 621 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms