RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 PANK4Q9NVE7 773 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 ZSWIM5Q9P217 1185 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 FETUBQ9UGM5 382 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 TARM1B6A8C7 271 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 OPLAHO14841 1288 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 PPM1DO15297 605 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 NUPL2O15504 423 aaKnown RBP4.38□□□□□ -1.71
SCN3A-209ENST00000639244 HSPA12AO43301 675 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 GRIN3BO60391 1043 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 CST8O60676 142 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 PDCP20941 246 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 DDX6P26196 483 aaKnown RBP eCLIP4.38□□□□□ -1.71
SCN3A-209ENST00000639244 DUSP4Q13115 394 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 FAM83EQ2M2I3 478 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 ERFEQ4G0M1 354 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 PITRM1Q5JRX3 1037 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 LPGAT1Q92604 370 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 MARVELD3Q96A59 401 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 PTCD3Q96EY7 689 aaKnown RBP4.38□□□□□ -1.71
SCN3A-209ENST00000639244 ZNF597Q96LX8 424 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 KCNS3Q9BQ31 491 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 SCAND2PQ9GZW5 306 aaPredicted RBP4.38□□□□□ -1.71
SCN3A-209ENST00000639244 GNPTGQ9UJJ9 305 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 UTP11Q9Y3A2 253 aaKnown RBP4.38□□□□□ -1.71
SCN3A-209ENST00000639244 A0A1B0GVC2 190 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 KPNA7A9QM74 516 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 PRR23D1E9PI22 279 aaPredicted RBP4.37□□□□□ -1.71
SCN3A-209ENST00000639244 ADAM23O75077 832 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 CIAO1O76071 339 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 ZBTB11O95625 1053 aaPredicted RBP4.37□□□□□ -1.71
SCN3A-209ENST00000639244 GNAI3P08754 354 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 SMIM6P0DI80 62 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 PRR23D2P0DMB1 279 aaPredicted RBP4.37□□□□□ -1.71
SCN3A-209ENST00000639244 ODC1P11926 461 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 COX4I1P13073 169 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 DGKQP52824 942 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 CLN3Q13286 438 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 USP10Q14694 798 aaKnown RBP4.37□□□□□ -1.71
SCN3A-209ENST00000639244 FAM98BQ52LJ0 330 aaKnown RBP4.37□□□□□ -1.71
SCN3A-209ENST00000639244 KLHL26Q53HC5 615 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 SEL1L2Q5TEA6 688 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 ZNF783Q6ZMS7 281 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 TUSC5Q8IXB3 177 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 FAM217AQ8IXS0 508 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 SLC10A4Q96EP9 437 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 RAD9AQ99638 391 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 TAS2R10Q9NYW0 307 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 TINAGQ9UJW2 476 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 AP4S1Q9Y587 144 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 NUP205Q92621 2012 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 USP31Q70CQ4 1352 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 OR5K3A6NET4 321 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 POLRMTO00411 1230 aaKnown RBP4.37□□□□□ -1.71
SCN3A-209ENST00000639244 LAD1O00515 517 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 NUDT21O43809 227 aaKnown RBP4.37□□□□□ -1.71
SCN3A-209ENST00000639244 UPP2O95045 317 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 CCNB2O95067 398 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 STSP08842 583 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 VSNL1P62760 191 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 PTGDRQ13258 359 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 PON3Q15166 354 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 KRT31Q15323 416 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 SLC25A24Q6NUK1 477 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 FAM171BQ6P995 826 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 USP50Q70EL3 339 aaPredicted RBP4.37□□□□□ -1.71
SCN3A-209ENST00000639244 MIGA2Q7L4E1 593 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 TDRPQ86YL5 185 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 RGL4Q8IZJ4 473 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 ADSSL1Q8N142 457 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 SYNPOQ8N3V7 929 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 NEDD1Q8NHV4 660 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 UPF1Q92900 1129 aaKnown RBP eCLIP4.37□□□□□ -1.71
SCN3A-209ENST00000639244 SNX18Q96RF0 628 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 FRMD8Q9BZ67 464 aaPredicted RBP4.37□□□□□ -1.71
SCN3A-209ENST00000639244 SLC19A3Q9BZV2 496 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 TRMT13Q9NUP7 481 aaKnown RBP4.37□□□□□ -1.71
SCN3A-209ENST00000639244 FAM120CQ9NX05 1096 aaKnown RBP4.37□□□□□ -1.71
SCN3A-209ENST00000639244 ZNF229Q9UJW7 825 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 MTO1Q9Y2Z2 717 aaKnown RBP4.37□□□□□ -1.71
SCN3A-209ENST00000639244 PCDHA3Q9Y5H8 950 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 SBK2P0C263 348 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 APEHP13798 732 aaKnown RBP4.37□□□□□ -1.71
SCN3A-209ENST00000639244 ZNF45Q02386 682 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 CTTNQ14247 550 aaKnown RBP4.37□□□□□ -1.71
SCN3A-209ENST00000639244 EFHC1Q5JVL4 640 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 STRIP1Q5VSL9 837 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 PCYOX1LQ8NBM8 494 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 SPATA4Q8NEY3 305 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 PTERQ96BW5 349 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 HMCESQ96FZ2 354 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 SUV39H2Q9H5I1 410 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 CYP26B1Q9NR63 512 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 GPRC5DQ9NZD1 345 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 SRRDQ9UH36 339 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 FKBP7Q9Y680 259 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 CKAP5Q14008 2032 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 FZD6O60353 706 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 OAZ2O95190 189 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 CSTAP01040 98 aa4.37□□□□□ -1.71
SCN3A-209ENST00000639244 ZNF18P17022 549 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms