RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 SMYD5Q6GMV2 418 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 NCEH1Q6PIU2 408 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 PHLDB2Q86SQ0 1253 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 MARCH9Q86YJ5 346 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 MMAAQ8IVH4 418 aaKnown RBP8.07□□□□□ -1.12
PNKP-229ENST00000637897 EMC1Q8N766 993 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 KDM1BQ8NB78 822 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 JOSD2Q8TAC2 188 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 CPA5Q8WXQ8 436 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 FOXJ1Q92949 421 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 FEM1AQ9BSK4 669 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 SCNM1Q9BWG6 230 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 STK33Q9BYT3 514 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 MIR1-1HGQ9H1L0 117 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 FAM204AQ9H8W3 233 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 NDFIP2Q9NV92 336 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 TRMT1Q9NXH9 659 aaKnown RBP8.07□□□□□ -1.12
PNKP-229ENST00000637897 FBXL12Q9NXK8 326 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 KIAA1522Q9P206 1035 aaPredicted RBP8.07□□□□□ -1.12
PNKP-229ENST00000637897 ADAMTS1Q9UHI8 967 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 RALYQ9UKM9 306 aaKnown RBP8.07□□□□□ -1.12
PNKP-229ENST00000637897 KLK13Q9UKR3 277 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 CAPN11Q9UMQ6 739 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 PLA2G4CQ9UP65 541 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 TBC1D30Q9Y2I9 924 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 LUC7L2Q9Y383 392 aaKnown RBP8.07□□□□□ -1.12
PNKP-229ENST00000637897 SNX11Q9Y5W9 270 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 PTPRBP23467 1997 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 ZFYVE26Q68DK2 2539 aa8.07□□□□□ -1.12
PNKP-229ENST00000637897 APC2O95996 2303 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 A0A1B0GVM2 712 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 TARSL2A2RTX5 802 aaKnown RBP8.06□□□□□ -1.12
PNKP-229ENST00000637897 FAM221BA6H8Z2 402 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 TCAF2A6NFQ2 919 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 USP27XA6NNY8 438 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 F5H5T6 163 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 FAM72CH0Y354 149 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 H0Y626 953 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 ATP9BO43861 1147 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 OPHN1O60890 802 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 ZMPSTE24O75844 475 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 APOEP02649 317 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 ASLP04424 464 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 ATP5BP06576 529 aaKnown RBP8.06□□□□□ -1.12
PNKP-229ENST00000637897 SRPRAP08240 638 aaKnown RBP8.06□□□□□ -1.12
PNKP-229ENST00000637897 CCDC175P0C221 793 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 UNGP13051 313 aaPredicted RBP8.06□□□□□ -1.12
PNKP-229ENST00000637897 CCR1P32246 355 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 SLC8A1P32418 973 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 KRT9P35527 623 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 CTSKP43235 329 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 VASPP50552 380 aaPredicted RBP8.06□□□□□ -1.12
PNKP-229ENST00000637897 RNASE9P60153 205 aaKnown RBP8.06□□□□□ -1.12
PNKP-229ENST00000637897 SIM1P81133 766 aaPredicted RBP8.06□□□□□ -1.12
PNKP-229ENST00000637897 ZBTB16Q05516 673 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 CDH18Q13634 790 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 RAPGEF1Q13905 1077 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 WDR45BQ5MNZ6 344 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 FAM72AQ5TYM5 149 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 MANEALQ5VSG8 457 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 NAA35Q5VZE5 725 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 ZNF776Q68DI1 518 aaPredicted RBP8.06□□□□□ -1.12
PNKP-229ENST00000637897 FAM72DQ6L9T8 149 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 USP30Q70CQ3 517 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 RAB44Q7Z6P3 723 aaPredicted RBP8.06□□□□□ -1.12
PNKP-229ENST00000637897 FAM72BQ86X60 149 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 CHCHD4Q8N4Q1 142 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 PNPLA1Q8N8W4 532 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 ATP6V0D2Q8N8Y2 350 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 MYRIPQ8NFW9 859 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 OR8K1Q8NGG5 319 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 KIF18AQ8NI77 898 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 CPLX3Q8WVH0 158 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 GOLGA1Q92805 767 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 FAM81BQ96LP2 452 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 CFAP57Q96MR6 1250 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 SLC6A18Q96N87 628 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 SYT11Q9BT88 431 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 BTBD1Q9H0C5 482 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 TKTL2Q9H0I9 626 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 GAREM1Q9H706 876 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 OSGEPQ9NPF4 335 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 ABHD10Q9NUJ1 306 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 ZNHIT6Q9NWK9 470 aaKnown RBP8.06□□□□□ -1.12
PNKP-229ENST00000637897 MPP6Q9NZW5 540 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 SUN2Q9UH99 717 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 PCOLCE2Q9UKZ9 415 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 PPP2R2CQ9Y2T4 447 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 KNTC1P50748 2209 aa8.06□□□□□ -1.12
PNKP-229ENST00000637897 GOLGA4Q13439 2230 aaKnown RBP8.06□□□□□ -1.12
PNKP-229ENST00000637897 EDDM13A0A1B0GTR0 161 aa8.05□□□□□ -1.12
PNKP-229ENST00000637897 A0A1W2PPC4 97 aa8.05□□□□□ -1.12
PNKP-229ENST00000637897 MEI4A8MW99 385 aa8.05□□□□□ -1.12
PNKP-229ENST00000637897 H0Y8X5 98 aa8.05□□□□□ -1.12
PNKP-229ENST00000637897 RTN2O75298 545 aa8.05□□□□□ -1.12
PNKP-229ENST00000637897 GFPT2O94808 682 aa8.05□□□□□ -1.12
PNKP-229ENST00000637897 FSBPO95073 299 aa8.05□□□□□ -1.12
PNKP-229ENST00000637897 ACADMP11310 421 aa8.05□□□□□ -1.12
PNKP-229ENST00000637897 SRCP12931 536 aa8.05□□□□□ -1.12
PNKP-229ENST00000637897 MMP8P22894 467 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms