RNA–Protein interactions for RNA: ENST00000636934.1

CLN8-211, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-211ENST00000636934 SNX15Q9NRS6 342 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 C20orf96Q9NUD7 363 aaPredicted RBP18.88■□□□□ 0.61
CLN8-211ENST00000636934 SFMBT1Q9UHJ3 866 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 MID2Q9UJV3 735 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 EMCNQ9ULC0 261 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 TLR6Q9Y2C9 796 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 HBS1LQ9Y450 684 aaKnown RBP18.88■□□□□ 0.61
CLN8-211ENST00000636934 TADA2AO75478 443 aa18.87■□□□□ 0.61
CLN8-211ENST00000636934 NEBLO76041 1014 aa18.87■□□□□ 0.61
CLN8-211ENST00000636934 PROCP04070 461 aa18.87■□□□□ 0.61
CLN8-211ENST00000636934 SERPINE1P05121 402 aa18.87■□□□□ 0.61
CLN8-211ENST00000636934 OLIG2Q13516 323 aa18.87■□□□□ 0.61
CLN8-211ENST00000636934 PCID2Q5JVF3 399 aa18.87■□□□□ 0.61
CLN8-211ENST00000636934 MBLAC2Q68D91 279 aa18.87■□□□□ 0.61
CLN8-211ENST00000636934 LONP2Q86WA8 852 aa18.87■□□□□ 0.61
CLN8-211ENST00000636934 ZNF280BQ86YH2 543 aa18.87■□□□□ 0.61
CLN8-211ENST00000636934 WDR75Q8IWA0 830 aaKnown RBP18.87■□□□□ 0.61
CLN8-211ENST00000636934 DCLK2Q8N568 766 aa18.87■□□□□ 0.61
CLN8-211ENST00000636934 PPP4R1Q8TF05 950 aa18.87■□□□□ 0.61
CLN8-211ENST00000636934 TBC1D10AQ9BXI6 508 aa18.87■□□□□ 0.61
CLN8-211ENST00000636934 TBC1D13Q9NVG8 400 aa18.87■□□□□ 0.61
CLN8-211ENST00000636934 OR6C75A6NL08 312 aa18.86■□□□□ 0.61
CLN8-211ENST00000636934 E9PAM4 449 aa18.86■□□□□ 0.61
CLN8-211ENST00000636934 FCHO1O14526 889 aa18.86■□□□□ 0.61
CLN8-211ENST00000636934 MPP3Q13368 585 aa18.86■□□□□ 0.61
CLN8-211ENST00000636934 UGP2Q16851 508 aa18.86■□□□□ 0.61
CLN8-211ENST00000636934 HSP90AA5PQ58FG0 334 aa18.86■□□□□ 0.61
CLN8-211ENST00000636934 AFMIDQ63HM1 303 aa18.86■□□□□ 0.61
CLN8-211ENST00000636934 C16orf46Q6P387 395 aa18.86■□□□□ 0.61
CLN8-211ENST00000636934 TRAF7Q6Q0C0 670 aa18.86■□□□□ 0.61
CLN8-211ENST00000636934 CEP57Q86XR8 500 aa18.86■□□□□ 0.61
CLN8-211ENST00000636934 CNTD1Q8N815 330 aa18.86■□□□□ 0.61
CLN8-211ENST00000636934 USP33Q8TEY7 942 aa18.86■□□□□ 0.61
CLN8-211ENST00000636934 PTCD3Q96EY7 689 aaKnown RBP18.86■□□□□ 0.61
CLN8-211ENST00000636934 SLC39A8Q9C0K1 460 aa18.86■□□□□ 0.61
CLN8-211ENST00000636934 ENTPD7Q9NQZ7 604 aa18.86■□□□□ 0.61
CLN8-211ENST00000636934 TMEM161AQ9NX61 479 aa18.86■□□□□ 0.61
CLN8-211ENST00000636934 SHROOM3Q8TF72 1996 aa18.86■□□□□ 0.61
CLN8-211ENST00000636934 F8W810 466 aa18.86■□□□□ 0.61
CLN8-211ENST00000636934 MSI1O43347 362 aaKnown RBP18.86■□□□□ 0.61
CLN8-211ENST00000636934 MAFKO60675 156 aa18.86■□□□□ 0.61
CLN8-211ENST00000636934 OR4Q2P0C623 313 aa18.86■□□□□ 0.61
CLN8-211ENST00000636934 MLLT6P55198 1093 aaPredicted RBP18.86■□□□□ 0.61
CLN8-211ENST00000636934 IRX4P78413 519 aa18.86■□□□□ 0.61
CLN8-211ENST00000636934 PREPLQ4J6C6 727 aaPredicted RBP18.86■□□□□ 0.61
CLN8-211ENST00000636934 WASHC2DQ5SRD0 308 aa18.86■□□□□ 0.61
CLN8-211ENST00000636934 ACBD5Q5T8D3 534 aaPredicted RBP18.86■□□□□ 0.61
CLN8-211ENST00000636934 OTOP3Q7RTS5 596 aa18.86■□□□□ 0.61
CLN8-211ENST00000636934 LCA5Q86VQ0 697 aa18.86■□□□□ 0.61
CLN8-211ENST00000636934 PPHLN1Q8NEY8 458 aaKnown RBP18.86■□□□□ 0.61
CLN8-211ENST00000636934 BTBD10Q9BSF8 475 aa18.86■□□□□ 0.61
CLN8-211ENST00000636934 TRPV6Q9H1D0 765 aa18.86■□□□□ 0.61
CLN8-211ENST00000636934 NMUR1Q9HB89 426 aa18.86■□□□□ 0.61
CLN8-211ENST00000636934 MRM3Q9HC36 420 aaKnown RBP18.86■□□□□ 0.61
CLN8-211ENST00000636934 SORCS3Q9UPU3 1222 aa18.86■□□□□ 0.61
CLN8-211ENST00000636934 ANKRD6Q9Y2G4 727 aa18.86■□□□□ 0.61
CLN8-211ENST00000636934 HS3ST4Q9Y661 456 aa18.86■□□□□ 0.61
CLN8-211ENST00000636934 MYO16Q9Y6X6 1858 aa18.85■□□□□ 0.61
CLN8-211ENST00000636934 H2AFYO75367 372 aaKnown RBP18.85■□□□□ 0.61
CLN8-211ENST00000636934 APOA4P06727 396 aa18.85■□□□□ 0.61
CLN8-211ENST00000636934 ESRRAP11474 423 aaPredicted RBP18.85■□□□□ 0.61
CLN8-211ENST00000636934 FGF3P11487 239 aaPredicted RBP18.85■□□□□ 0.61
CLN8-211ENST00000636934 SLC1A6P48664 564 aa18.85■□□□□ 0.61
CLN8-211ENST00000636934 POLD2P49005 469 aa18.85■□□□□ 0.61
CLN8-211ENST00000636934 AQP5P55064 265 aa18.85■□□□□ 0.61
CLN8-211ENST00000636934 RPL10AP62906 217 aaKnown RBP18.85■□□□□ 0.61
CLN8-211ENST00000636934 WLSQ5T9L3 541 aa18.85■□□□□ 0.61
CLN8-211ENST00000636934 FSTL4Q6MZW2 842 aa18.85■□□□□ 0.61
CLN8-211ENST00000636934 ZNF280DQ6N043 979 aa18.85■□□□□ 0.61
CLN8-211ENST00000636934 PKN3Q6P5Z2 889 aa18.85■□□□□ 0.61
CLN8-211ENST00000636934 POTEHQ6S545 545 aa18.85■□□□□ 0.61
CLN8-211ENST00000636934 SLC43A3Q8NBI5 491 aa18.85■□□□□ 0.61
CLN8-211ENST00000636934 LINC01599Q8WXQ3 324 aa18.85■□□□□ 0.61
CLN8-211ENST00000636934 FATE1Q969F0 183 aa18.85■□□□□ 0.61
CLN8-211ENST00000636934 UTP4Q969X6 686 aaKnown RBP18.85■□□□□ 0.61
CLN8-211ENST00000636934 MFSD3Q96ES6 412 aa18.85■□□□□ 0.61
CLN8-211ENST00000636934 TSNARE1Q96NA8 513 aa18.85■□□□□ 0.61
CLN8-211ENST00000636934 APOL2Q9BQE5 337 aa18.85■□□□□ 0.61
CLN8-211ENST00000636934 ELAC1Q9H777 363 aaKnown RBP18.85■□□□□ 0.61
CLN8-211ENST00000636934 CHRAC1Q9NRG0 131 aa18.85■□□□□ 0.61
CLN8-211ENST00000636934 OLA1Q9NTK5 396 aaKnown RBP18.85■□□□□ 0.61
CLN8-211ENST00000636934 COPG2Q9UBF2 871 aa18.85■□□□□ 0.61
CLN8-211ENST00000636934 PRG3Q9Y2Y8 225 aaPredicted RBP18.85■□□□□ 0.61
CLN8-211ENST00000636934 RTN3O95197 1032 aaPredicted RBP18.84■□□□□ 0.61
CLN8-211ENST00000636934 MOCS2O96007 188 aaPredicted RBP18.84■□□□□ 0.61
CLN8-211ENST00000636934 GSRP00390 522 aa18.84■□□□□ 0.61
CLN8-211ENST00000636934 CPA3P15088 417 aa18.84■□□□□ 0.61
CLN8-211ENST00000636934 DNAJB1P25685 340 aa18.84■□□□□ 0.61
CLN8-211ENST00000636934 PSEN1P49768 467 aa18.84■□□□□ 0.61
CLN8-211ENST00000636934 NDST2P52849 883 aa18.84■□□□□ 0.61
CLN8-211ENST00000636934 TBX4P57082 545 aa18.84■□□□□ 0.61
CLN8-211ENST00000636934 PCLAFQ15004 111 aa18.84■□□□□ 0.61
CLN8-211ENST00000636934 VARS2Q5ST30 1063 aaKnown RBP18.84■□□□□ 0.61
CLN8-211ENST00000636934 ABI1Q8IZP0 508 aa18.84■□□□□ 0.61
CLN8-211ENST00000636934 ATP6V0D2Q8N8Y2 350 aa18.84■□□□□ 0.61
CLN8-211ENST00000636934 PIWIL2Q8TC59 973 aaKnown RBP18.84■□□□□ 0.61
CLN8-211ENST00000636934 SH3TC2Q8TF17 1288 aa18.84■□□□□ 0.61
CLN8-211ENST00000636934 SLC39A13Q96H72 371 aa18.84■□□□□ 0.61
CLN8-211ENST00000636934 FBXO6Q9NRD1 293 aaPredicted RBP18.84■□□□□ 0.61
CLN8-211ENST00000636934 IARS2Q9NSE4 1012 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms