RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 PRPF39Q86UA1 669 aaKnown RBP18.39■□□□□ 0.53
PNKP-225ENST00000636214 SH2D3CQ8N5H7 860 aa18.39■□□□□ 0.53
PNKP-225ENST00000636214 FRS2Q8WU20 508 aa18.39■□□□□ 0.53
PNKP-225ENST00000636214 NT5C3BQ969T7 300 aa18.39■□□□□ 0.53
PNKP-225ENST00000636214 SERAC1Q96JX3 654 aa18.39■□□□□ 0.53
PNKP-225ENST00000636214 C1orf74Q96LT6 269 aa18.39■□□□□ 0.53
PNKP-225ENST00000636214 CFAP57Q96MR6 1250 aa18.39■□□□□ 0.53
PNKP-225ENST00000636214 NLRC4Q9NPP4 1024 aa18.39■□□□□ 0.53
PNKP-225ENST00000636214 DYRK4Q9NR20 520 aa18.39■□□□□ 0.53
PNKP-225ENST00000636214 METTL5Q9NRN9 209 aaKnown RBP18.39■□□□□ 0.53
PNKP-225ENST00000636214 PLXNA2O75051 1894 aa18.38■□□□□ 0.53
PNKP-225ENST00000636214 E9PAM4 449 aa18.38■□□□□ 0.53
PNKP-225ENST00000636214 VILLO15195 856 aa18.38■□□□□ 0.53
PNKP-225ENST00000636214 CD38P28907 300 aa18.38■□□□□ 0.53
PNKP-225ENST00000636214 OR1E1P30953 314 aa18.38■□□□□ 0.53
PNKP-225ENST00000636214 SDC4P31431 198 aa18.38■□□□□ 0.53
PNKP-225ENST00000636214 SOX5P35711 763 aa18.38■□□□□ 0.53
PNKP-225ENST00000636214 NUDT1P36639 197 aa18.38■□□□□ 0.53
PNKP-225ENST00000636214 CTSKP43235 329 aa18.38■□□□□ 0.53
PNKP-225ENST00000636214 GRK6P43250 576 aa18.38■□□□□ 0.53
PNKP-225ENST00000636214 MYL5Q02045 173 aa18.38■□□□□ 0.53
PNKP-225ENST00000636214 ALFQ53S48 1182 aa18.38■□□□□ 0.53
PNKP-225ENST00000636214 GLRX5Q86SX6 157 aa18.38■□□□□ 0.53
PNKP-225ENST00000636214 FAM131BQ86XD5 332 aa18.38■□□□□ 0.53
PNKP-225ENST00000636214 DCAF4L2Q8NA75 395 aa18.38■□□□□ 0.53
PNKP-225ENST00000636214 NEK11Q8NG66 645 aa18.38■□□□□ 0.53
PNKP-225ENST00000636214 PIP4K2CQ8TBX8 421 aa18.38■□□□□ 0.53
PNKP-225ENST00000636214 ALG14Q96F25 216 aa18.38■□□□□ 0.53
PNKP-225ENST00000636214 HAPLN3Q96S86 360 aa18.38■□□□□ 0.53
PNKP-225ENST00000636214 KDM4CQ9H3R0 1056 aa18.38■□□□□ 0.53
PNKP-225ENST00000636214 FANCLQ9NW38 375 aa18.38■□□□□ 0.53
PNKP-225ENST00000636214 TP53BP1Q12888 1972 aaPredicted RBP18.38■□□□□ 0.53
PNKP-225ENST00000636214 GOLGA4Q13439 2230 aaKnown RBP18.38■□□□□ 0.53
PNKP-225ENST00000636214 H0Y8X5 98 aa18.37■□□□□ 0.53
PNKP-225ENST00000636214 MCF2LO15068 1137 aa18.37■□□□□ 0.53
PNKP-225ENST00000636214 YKT6O15498 198 aa18.37■□□□□ 0.53
PNKP-225ENST00000636214 PCDHGA12O60330 932 aa18.37■□□□□ 0.53
PNKP-225ENST00000636214 NSFP46459 744 aaKnown RBP18.37■□□□□ 0.53
PNKP-225ENST00000636214 KLK7P49862 253 aa18.37■□□□□ 0.53
PNKP-225ENST00000636214 CLCN6P51797 869 aa18.37■□□□□ 0.53
PNKP-225ENST00000636214 COPB1P53618 953 aaKnown RBP18.37■□□□□ 0.53
PNKP-225ENST00000636214 ATP11AP98196 1134 aa18.37■□□□□ 0.53
PNKP-225ENST00000636214 POM121L1PQ3SYA9 428 aa18.37■□□□□ 0.53
PNKP-225ENST00000636214 RETSATQ6NUM9 610 aa18.37■□□□□ 0.53
PNKP-225ENST00000636214 ARCQ7LC44 396 aa18.37■□□□□ 0.53
PNKP-225ENST00000636214 RAB44Q7Z6P3 723 aaPredicted RBP18.37■□□□□ 0.53
PNKP-225ENST00000636214 PNPLA1Q8N8W4 532 aa18.37■□□□□ 0.53
PNKP-225ENST00000636214 OR52K2Q8NGK3 314 aa18.37■□□□□ 0.53
PNKP-225ENST00000636214 SLC20A1Q8WUM9 679 aa18.37■□□□□ 0.53
PNKP-225ENST00000636214 ADAMTS14Q8WXS8 1223 aa18.37■□□□□ 0.53
PNKP-225ENST00000636214 GATA6Q92908 595 aa18.37■□□□□ 0.53
PNKP-225ENST00000636214 C11orf70Q9BRQ4 267 aa18.37■□□□□ 0.53
PNKP-225ENST00000636214 GDF3Q9NR23 364 aa18.37■□□□□ 0.53
PNKP-225ENST00000636214 SEPT11Q9NVA2 429 aaKnown RBP18.37■□□□□ 0.53
PNKP-225ENST00000636214 MPP6Q9NZW5 540 aa18.37■□□□□ 0.53
PNKP-225ENST00000636214 VPS51Q9UID3 782 aa18.37■□□□□ 0.53
PNKP-225ENST00000636214 NOCTQ9UK39 431 aaKnown RBP18.37■□□□□ 0.53
PNKP-225ENST00000636214 HS3ST2Q9Y278 367 aa18.37■□□□□ 0.53
PNKP-225ENST00000636214 OR51B4Q9Y5P0 310 aa18.37■□□□□ 0.53
PNKP-225ENST00000636214 SNX10Q9Y5X0 201 aa18.37■□□□□ 0.53
PNKP-225ENST00000636214 GOLGA8CPA6NN73 597 aa18.36■□□□□ 0.53
PNKP-225ENST00000636214 KCNK3O14649 394 aa18.36■□□□□ 0.53
PNKP-225ENST00000636214 PLRG1O43660 514 aaKnown RBP18.36■□□□□ 0.53
PNKP-225ENST00000636214 SNAP91O60641 907 aa18.36■□□□□ 0.53
PNKP-225ENST00000636214 CBFA2T3O75081 653 aa18.36■□□□□ 0.53
PNKP-225ENST00000636214 RTN2O75298 545 aa18.36■□□□□ 0.53
PNKP-225ENST00000636214 MBD3O95983 291 aa18.36■□□□□ 0.53
PNKP-225ENST00000636214 SRCP12931 536 aa18.36■□□□□ 0.53
PNKP-225ENST00000636214 DRD3P35462 400 aa18.36■□□□□ 0.53
PNKP-225ENST00000636214 ARRB1P49407 418 aaPredicted RBP18.36■□□□□ 0.53
PNKP-225ENST00000636214 CDO1Q16878 200 aa18.36■□□□□ 0.53
PNKP-225ENST00000636214 ZNF783Q6ZMS7 281 aa18.36■□□□□ 0.53
PNKP-225ENST00000636214 RBM43Q6ZSC3 357 aaKnown RBP18.36■□□□□ 0.53
PNKP-225ENST00000636214 DOCK4Q8N1I0 1966 aa18.36■□□□□ 0.53
PNKP-225ENST00000636214 GPT2Q8TD30 523 aa18.36■□□□□ 0.53
PNKP-225ENST00000636214 ZCCHC14Q8WYQ9 949 aaKnown RBP18.36■□□□□ 0.53
PNKP-225ENST00000636214 ORAI3Q9BRQ5 295 aa18.36■□□□□ 0.53
PNKP-225ENST00000636214 SPON2Q9BUD6 331 aa18.36■□□□□ 0.53
PNKP-225ENST00000636214 ZYG11BQ9C0D3 744 aa18.36■□□□□ 0.53
PNKP-225ENST00000636214 TMEM59LQ9UK28 342 aa18.36■□□□□ 0.53
PNKP-225ENST00000636214 ZMIZ1Q9ULJ6 1067 aa18.36■□□□□ 0.53
PNKP-225ENST00000636214 ILVBLA1L0T0 632 aa18.35■□□□□ 0.53
PNKP-225ENST00000636214 DRGXA6NNA5 263 aa18.35■□□□□ 0.53
PNKP-225ENST00000636214 CBX4O00257 560 aa18.35■□□□□ 0.53
PNKP-225ENST00000636214 PLK4O00444 970 aa18.35■□□□□ 0.53
PNKP-225ENST00000636214 KPNA3O00505 521 aaPredicted RBP18.35■□□□□ 0.53
PNKP-225ENST00000636214 MAGEC1O60732 1142 aa18.35■□□□□ 0.53
PNKP-225ENST00000636214 PRNPP04156 253 aa18.35■□□□□ 0.53
PNKP-225ENST00000636214 CYP1A1P04798 512 aaPredicted RBP18.35■□□□□ 0.53
PNKP-225ENST00000636214 DESP17661 470 aa18.35■□□□□ 0.53
PNKP-225ENST00000636214 MMP8P22894 467 aa18.35■□□□□ 0.53
PNKP-225ENST00000636214 RRM1P23921 792 aa18.35■□□□□ 0.53
PNKP-225ENST00000636214 ETFBP38117 255 aa18.35■□□□□ 0.53
PNKP-225ENST00000636214 PPP2CBP62714 309 aa18.35■□□□□ 0.53
PNKP-225ENST00000636214 PPP2CAP67775 309 aa18.35■□□□□ 0.53
PNKP-225ENST00000636214 IL9RQ01113 521 aa18.35■□□□□ 0.53
PNKP-225ENST00000636214 FMO1Q01740 532 aa18.35■□□□□ 0.53
PNKP-225ENST00000636214 UBXN1Q04323 297 aa18.35■□□□□ 0.53
PNKP-225ENST00000636214 CNTN1Q12860 1018 aa18.35■□□□□ 0.53
PNKP-225ENST00000636214 SETMARQ53H47 684 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms