RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 DCAKDQ8WVC6 231 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 DLG3Q92796 817 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 OSBP2Q969R2 916 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 DAPK2Q9UIK4 370 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 MDC1Q14676 2089 aaKnown RBP6.1□□□□□ -1.43
SCN1A-212ENST00000636194 HYKKA2RU49 373 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 GCP02774 474 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 DBIP07108 87 aaKnown RBP6.1□□□□□ -1.43
SCN1A-212ENST00000636194 HMBSP08397 361 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 FAM153BP0C7A2 387 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 CFL1P23528 166 aaKnown RBP6.1□□□□□ -1.43
SCN1A-212ENST00000636194 IL12AP29459 219 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 HOXA13P31271 388 aaPredicted RBP6.1□□□□□ -1.43
SCN1A-212ENST00000636194 OLR1P78380 273 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 MRPS22P82650 360 aaKnown RBP6.1□□□□□ -1.43
SCN1A-212ENST00000636194 TNFAIP8L1Q8WVP5 186 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 LIN37Q96GY3 246 aaPredicted RBP6.1□□□□□ -1.43
SCN1A-212ENST00000636194 C9orf16Q9BUW7 83 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 NOL6Q9H6R4 1146 aaKnown RBP6.1□□□□□ -1.43
SCN1A-212ENST00000636194 CYP4F12Q9HCS2 524 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 IKZF3Q9UKT9 509 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 AFF2P51816 1311 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 RGSL1A5PLK6 1076 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 CLK2P49760 499 aaKnown RBP6.1□□□□□ -1.43
SCN1A-212ENST00000636194 CDC42P60953 191 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 SLC34A1Q06495 639 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 RFTN2Q52LD8 501 aaPredicted RBP6.1□□□□□ -1.43
SCN1A-212ENST00000636194 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.1□□□□□ -1.43
SCN1A-212ENST00000636194 SMARCD3Q6STE5 483 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 ARMC8Q8IUR7 673 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 OXR1Q8N573 874 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 SLC25A41Q8N5S1 370 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 ZSCAN4Q8NAM6 433 aaPredicted RBP6.1□□□□□ -1.43
SCN1A-212ENST00000636194 EEF2KMTQ96G04 330 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 C9orf72Q96LT7 481 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 RBM15Q96T37 977 aaKnown RBP eCLIP6.1□□□□□ -1.43
SCN1A-212ENST00000636194 KANSL3Q9P2N6 904 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 GNEQ9Y223 722 aaKnown RBP6.1□□□□□ -1.43
SCN1A-212ENST00000636194 KDM6AO15550 1401 aaPredicted RBP6.1□□□□□ -1.43
SCN1A-212ENST00000636194 RPTORQ8N122 1335 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 A0A1B0GVC2 190 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 ANKDD1BA6NHY2 528 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 SFI1A8K8P3 1242 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 NR2F1P10589 423 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 ERCC2P18074 760 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 SKIV2L2P42285 1042 aaKnown RBP6.1□□□□□ -1.43
SCN1A-212ENST00000636194 CRISP1P54107 249 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 SLC39A14Q15043 492 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 CARTPTQ16568 116 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 LONRF1Q17RB8 773 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 UNQ6126/PRO20091Q6UXV3 157 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 FAM92BQ6ZTR7 304 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 SLC9B2Q86UD5 537 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 JAZF1Q86VZ6 243 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 ZNF677Q86XU0 584 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 ZNF567Q8N184 647 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 PCSK9Q8NBP7 692 aaKnown RBP6.1□□□□□ -1.43
SCN1A-212ENST00000636194 DBNDD2Q9BQY9 259 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 ZNF471Q9BX82 626 aaPredicted RBP6.1□□□□□ -1.43
SCN1A-212ENST00000636194 COA1Q9GZY4 146 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 TUT1Q9H6E5 874 aaKnown RBP6.1□□□□□ -1.43
SCN1A-212ENST00000636194 BTBD7Q9P203 1132 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 ARMCX1Q9P291 453 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 NEU2Q9Y3R4 380 aa6.1□□□□□ -1.43
SCN1A-212ENST00000636194 FAM86C2PA6NEL3 165 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 L7N2F9 121 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 ZBTB14O43829 449 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 SERPINB7O75635 380 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 ALAS2P22557 587 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 EIF4BP23588 611 aaKnown RBP6.09□□□□□ -1.43
SCN1A-212ENST00000636194 TTKP33981 857 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 VAMP2P63027 116 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 SLC10A7Q0GE19 358 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 RIPK1Q13546 671 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 RHEBQ15382 184 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 TAF1CQ15572 869 aaPredicted RBP6.09□□□□□ -1.43
SCN1A-212ENST00000636194 HKDC1Q2TB90 917 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 VPS26BQ4G0F5 336 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 PYDC2Q56P42 97 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 IQSEC1Q6DN90 963 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 FIGNL1Q6PIW4 674 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 PTF1AQ7RTS3 328 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 ZNF720Q7Z2F6 126 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 FRMD5Q7Z6J6 570 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 MTDHQ86UE4 582 aaKnown RBP6.09□□□□□ -1.43
SCN1A-212ENST00000636194 CARNMT1Q8N4J0 409 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 TMEM161BQ8NDZ6 487 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 PHF10Q8WUB8 498 aaKnown RBP6.09□□□□□ -1.43
SCN1A-212ENST00000636194 KCTD4Q8WVF5 259 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 LXNQ9BS40 222 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 ZNF350Q9GZX5 532 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 TUBA8Q9NY65 449 aaPredicted RBP6.09□□□□□ -1.43
SCN1A-212ENST00000636194 TRPM6Q9BX84 2022 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 ZNF518AQ6AHZ1 1483 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 PLB1Q6P1J6 1458 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 AFDNP55196 1824 aaKnown RBP6.09□□□□□ -1.43
SCN1A-212ENST00000636194 A0A096LPK6 155 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 ANO9A1A5B4 782 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 E2F3O00716 465 aa6.09□□□□□ -1.43
SCN1A-212ENST00000636194 TBX3O15119 743 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms