RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 SLMAPQ14BN4 828 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 MORF4L2Q15014 288 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 PDK1Q15118 436 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 CFAP58Q5T655 872 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 HEATR6Q6AI08 1181 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 NADSYN1Q6IA69 706 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 RWDD4Q6NW29 188 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 KLHDC10Q6PID8 442 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 PARM1Q6UWI2 310 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 ITIH5Q86UX2 942 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 NLRP14Q86W24 1093 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 KIAA2013Q8IYS2 634 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 ZCCHC9Q8N567 271 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 TAB3Q8N5C8 712 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 ATP6V0D2Q8N8Y2 350 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 OR2W6PQ8NHA6 318 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 CCDC110Q8TBZ0 833 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 TFB1MQ8WVM0 346 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 FGF13Q92913 245 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 FGF14Q92915 247 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 WBP2Q969T9 261 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 TBC1D31Q96DN5 1066 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 ZNF419Q96HQ0 510 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 ZFRQ96KR1 1074 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 SLC22A12Q96S37 553 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 RUFY1Q96T51 708 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 WDR83Q9BRX9 315 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 NACA2Q9H009 215 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 NOL6Q9H6R4 1146 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 DNAJC17Q9NVM6 304 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 GDE1Q9NZC3 331 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 DNMT3LQ9UJW3 386 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 SHOC2Q9UQ13 582 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 PCDHGA2Q9Y5H1 932 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 FANCMQ8IYD8 2048 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 C5orf60A6NFR6 353 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 FAM170BA6NMN3 283 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 FGF10O15520 208 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 ECI2O75521 394 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 ZNF189O75820 626 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 METTL18O95568 372 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 F11P03951 625 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 KLKB1P03952 638 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 PMS2P54278 862 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 ZXDBP98169 803 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 AUHQ13825 339 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 FASTKD3Q14CZ7 662 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 MSS51Q4VC12 460 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 SPDYCQ5MJ68 293 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 HECTD3Q5T447 861 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 ACBD5Q5T8D3 534 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 ALS2CLQ60I27 953 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 AFMIDQ63HM1 303 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 CEP128Q6ZU80 1094 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 CCDC25Q86WR0 208 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 TMC8Q8IU68 726 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 RELL1Q8IUW5 271 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 DEPDC1BQ8WUY9 529 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 UBLCP1Q8WVY7 318 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 HTR3CQ8WXA8 447 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 IGSF8Q969P0 613 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 RMDN1Q96DB5 314 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 P2RY11Q96G91 374 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 BTN2A3PQ96KV6 586 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 FAM126AQ9BYI3 521 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 FOXP3Q9BZS1 431 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 PABPC3Q9H361 631 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 CDC42EP4Q9H3Q1 356 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 CATSPERBQ9H7T0 1116 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 SPATA6Q9NWH7 488 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 OGFRQ9NZT2 677 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 MPP6Q9NZW5 540 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 PAK5Q9P286 719 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 PLAAQ9Y263 795 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 HBS1LQ9Y450 684 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 ZNF292O60281 2723 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 GVINP1Q7Z2Y8 2422 aa9.73□□□□□ -0.85
PDLIM5-223ENST00000627587 GOLGA6L7A0A1B0GV03 622 aa9.72□□□□□ -0.85
PDLIM5-223ENST00000627587 SMAPO00193 183 aa9.72□□□□□ -0.85
PDLIM5-223ENST00000627587 CCL16O15467 120 aa9.72□□□□□ -0.85
PDLIM5-223ENST00000627587 RIPK2O43353 540 aa9.72□□□□□ -0.85
PDLIM5-223ENST00000627587 BANF1O75531 89 aa9.72□□□□□ -0.85
PDLIM5-223ENST00000627587 SHBGP04278 402 aa9.72□□□□□ -0.85
PDLIM5-223ENST00000627587 HMBSP08397 361 aa9.72□□□□□ -0.85
PDLIM5-223ENST00000627587 PTPN2P17706 415 aa9.72□□□□□ -0.85
PDLIM5-223ENST00000627587 MX2P20592 715 aa9.72□□□□□ -0.85
PDLIM5-223ENST00000627587 GARSP41250 739 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-223ENST00000627587 MAGEA6P43360 314 aa9.72□□□□□ -0.85
PDLIM5-223ENST00000627587 RPS9P46781 194 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-223ENST00000627587 TUBP50607 506 aa9.72□□□□□ -0.85
PDLIM5-223ENST00000627587 BASP1P80723 227 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-223ENST00000627587 PPIDQ08752 370 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-223ENST00000627587 AP1B1Q10567 949 aa9.72□□□□□ -0.85
PDLIM5-223ENST00000627587 PABPC1LQ4VXU2 614 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-223ENST00000627587 ALFQ53S48 1182 aa9.72□□□□□ -0.85
PDLIM5-223ENST00000627587 HSP90B2PQ58FF3 399 aa9.72□□□□□ -0.85
PDLIM5-223ENST00000627587 FAM133BQ5BKY9 247 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-223ENST00000627587 SYCP2LQ5T4T6 812 aa9.72□□□□□ -0.85
PDLIM5-223ENST00000627587 FAXCQ5TGI0 409 aa9.72□□□□□ -0.85
PDLIM5-223ENST00000627587 NUGGCQ68CJ6 796 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms